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Primer sequences for RT–PCR, MSP and BSP analysis.

Shasha Su (830078)
Feng Hong (174976)
Yanling Liang (830079)
Jieqiong Zhou (475309)
Yan Liang (139654)
Kequan Chen (830080)
Xinying Wang (436220)
Zhongqiu Wang (283253)
Zhiqing Wang (830081)
Cassie Chang (830082)
Weihua Han (666550)
Wei Gong (112494)
Haitao Qin (830083)
Bo Jiang (76119)
Huabao Xiong (830084)
Liang Peng (142254)

Publication date

November 2015

DOI

10.1371/journal.pone.0143513.t001

Abstract

<p>Note: F: forward primer; R: reverse primer; bps: base pairs.</p><p>Primer sequences for RT–PCR, MSP and BSP analysis.</p

Extracted data

Related items

Sequence of primers used in the study to amplification segments for analysis of each SNP.

Mónica Alexandra Bustos (14725057)
Luz Dary Castañeda-Castañeda (14725060)
Carmen Rosa Acosta (14725063)
Diana García (14725066)
Diana Patricia Bohada (14725069)
Raúl Rodríguez (830321)
Martha Inírida Guerrero (13117365)

March 2023

Sequence of primers used in the study to amplification segments for analysis of each SNP.</p

Primer sequences (5’-3’) for methylation analysis.

Adriano Azevedo Mello (812698)
Mariana Ferreira Leal (147538)
Juan Antonio Rey (394565)
Giovanny Rebouças Pinto (394568)
Leticia Martins Lamarão (4909240)
Raquel Carvalho Montenegro (229884)
Ana Paula Negreiros Nunes Alves (812699)
Paulo Pimentel Assumpção (147541)
Barbara do Nascimento Borges (5222315)
Marília Cardoso Smith (570268)
Rommel Rodriguez Burbano (3279684)

October 2015

<p>MSP: primers for methyl-specific PCR; BSP: primers for Bisulfite Sequencing PCR; M: primer for me...

Primers used in this study.

Yueqiang Leng (276522)
Shaobin Zhong (4258)

May 2015

<p>*Underlined sequences are complementary to M13F and M13R sequences, respectively.</p><p>Primers u...

List of primer sequences used in this study.

Xueqi Qu (707144)
Maren Pröll (707145)
Christiane Neuhoff (412997)
Rui Zhang (13940)
Mehmet Ulas Cinar (413003)
Md. Munir Hossain (707146)
Dawit Tesfaye (79384)
Christine Große-Brinkhaus (412998)
Dessie Salilew-Wondim (479277)
Ernst Tholen (79379)
Christian Looft (413001)
Michael Hölker (79376)
Karl Schellander (79383)
Muhammad Jasim Uddin (413002)

March 2015

<p>F: Forward primer; R: Reverse primer; bp: base pair.</p><p>List of primer sequences used in this ...

Primers sequence.

Meijiao He (666387)
Yongtai Gong (666388)
Jing Shi (16730)
Zhenwei Pan (296083)
Hui Zou (666389)
Danghui Sun (666390)
Xin Tu (205018)
Xiangyang Tan (402544)
Jianqiang Li (390212)
Weimin Li (131040)
Bin Liu (5899)
Jingyi Xue (338024)
Li Sheng (118074)
Chunhong Xiu (666391)
Ning Yang (114965)
Hongjie Xue (666392)
Xue Ding (666393)
Chengyuan Yu (666394)
Yue Li (102191)

November 2014

<p>RT, RT primers; FP, forward primer; RP, reverse primer.</p><p>Primers sequence.</p

Primer sequences.

Omkaram Gangisetty (663676)
Rola Bekdash (663677)
George Maglakelidze (663678)
Dipak K. Sarkar (307352)

November 2014

<p>Forward primer (FP), Reverse primer (RP), Methyl forward primer (MFP), Methyl reverse primer (MRP...

Sequences of the primers used in the reverse transcription and RT-PCR.

Dong Li (212687)
Long Ji (622763)
Lianbo Liu (622764)
Yizhi Liu (90863)
Haifeng Hou (622765)
Kunkun Yu (622766)
Qiang Sun (225630)
Zhongtang Zhao (520419)

August 2014

<p><b>RT:</b> reverse-transcription; F: forward primer; R: reverse primer.</p><p>Sequences of the pr...

Forward and reverse primer sequences, product sizes and accession numbers for genes analyzed by qRT-PCR. bp: base pairs.

Kirsten Hogg (283182)
Charlotte Wood (344407)
Alan S. McNeilly (70318)
W. Colin Duncan (209189)

February 2013

<p>Forward and reverse primer sequences, product sizes and accession numbers for genes analyzed by q...

Sequences of the primers employed for <i>BRAF<sup>V600E</sup></i> analysis.

Luigi Laghi (17644)
Stefania Beghelli (306462)
Antonino Spinelli (306464)
Paolo Bianchi (17641)
Gianluca Basso (306465)
Giuseppe Di Caro (306466)
Anna Brecht (306468)
Giuseppe Celesti (306470)
Giona Turri (306472)
Samantha Bersani (306474)
Guido Schumacher (306476)
Christoph Röcken (170345)
Ilona Gräntzdörffer (306477)
Massimo Roncalli (17647)
Alessandro Zerbi (306478)
Peter Neuhaus (74029)
Claudio Bassi (306480)
Marco Montorsi (306482)
Aldo Scarpa (242345)
Alberto Malesci (17643)

February 2013

<p>Sequences of the primers employed for <i>BRAF<sup>V600E</sup></i> analysis.</p

List of forward and reverse primers (from 5′ to 3′) used in Real-time PCR analysis.

Regina Hoo (673911)
Jian Hang Lam (546775)
Ludovic Huot (120251)
Aakanksha Pant (673912)
Rui Li (4631)
David Hot (120264)
Sylvie Alonso (284565)

December 2014

<p>List of forward and reverse primers (from 5′ to 3′) used in Real-time PCR analysis.</p

Primer sequences used to analyze <i>MMR</i>.

Gloria Perazzoli (811155)
Jose Prados (778445)
Raul Ortiz (778443)
Octavio Caba (811156)
Laura Cabeza (811157)
Maria Berdasco (5665351)
Beatriz Gónzalez (5665354)
Consolación Melguizo (5665357)

October 2015

<p>All primers are written in a 5' to 3' direction and grouped according to pairs. F, forward primer...

Primer sequences used in the study, NCBI reference sequences, and amplicon sizes (base pairs).

Daniela Gabbia (406250)
Luisa Pozzo (4593601)
Giorgia Zigiotto (5787290)
Marco Roverso (5787293)
Diana Sacchi (5787296)
Arianna Dalla Pozza (5787299)
Maria Carrara (2211856)
Sara Bogialli (1598125)
Annarosa Floreani (5787302)
Maria Guido (204356)
Sara De Martin (406249)

September 2018

Primer sequences used in the study, NCBI reference sequences, and amplicon sizes (base pairs).</p

Sequences of the primers used in real-time polymerase chain reaction and reverse transcription.

Roman Moravčík (17145102)
Soňa Olejárová (17145105)
Jana Zlacká (17145108)
Iveta Herichová (12969233)

October 2023

Sequences of the primers used in real-time polymerase chain reaction and reverse transcription.</p

PCR primer sequences for SNP amplification and extension.

Jianhua Jin (537722)
Faming Lin (642086)
Shiyu Liao (589987)
Qiyu Bao (8800)
Liyan Ni (129626)

October 2014

<p>F = Forward; R = Reverse; E = Extension.</p><p>PCR primer sequences for SNP amplification a...

Forward and reverse primer sequences used for quantitative real time PCR analyses.

Eva E. R. Philipp (133863)
Wiebke Wessels (133866)
Heike Gruber (133869)
Julia Strahl (133870)
Anika E. Wagner (133872)
Insa M. A. Ernst (133876)
Gerald Rimbach (133878)
Lars Kraemer (133880)
Stefan Schreiber (36915)
Doris Abele (133883)
Philip Rosenstiel (68103)

September 2012

<p>Forward and reverse primer sequences used for quantitative real time PCR analyses.</p

Sequence of primers used in the study to amplification segments for analysis of each SNP.

Mónica Alexandra Bustos (14725057)
Luz Dary Castañeda-Castañeda (14725060)
Carmen Rosa Acosta (14725063)
Diana García (14725066)
Diana Patricia Bohada (14725069)
Raúl Rodríguez (830321)
Martha Inírida Guerrero (13117365)

March 2023

Sequence of primers used in the study to amplification segments for analysis of each SNP.</p

Primer sequences (5’-3’) for methylation analysis.

Adriano Azevedo Mello (812698)
Mariana Ferreira Leal (147538)
Juan Antonio Rey (394565)
Giovanny Rebouças Pinto (394568)
Leticia Martins Lamarão (4909240)
Raquel Carvalho Montenegro (229884)
Ana Paula Negreiros Nunes Alves (812699)
Paulo Pimentel Assumpção (147541)
Barbara do Nascimento Borges (5222315)
Marília Cardoso Smith (570268)
Rommel Rodriguez Burbano (3279684)

October 2015

<p>MSP: primers for methyl-specific PCR; BSP: primers for Bisulfite Sequencing PCR; M: primer for me...

Primers used in this study.

Yueqiang Leng (276522)
Shaobin Zhong (4258)

May 2015

<p>*Underlined sequences are complementary to M13F and M13R sequences, respectively.</p><p>Primers u...

List of primer sequences used in this study.

Xueqi Qu (707144)
Maren Pröll (707145)
Christiane Neuhoff (412997)
Rui Zhang (13940)
Mehmet Ulas Cinar (413003)
Md. Munir Hossain (707146)
Dawit Tesfaye (79384)
Christine Große-Brinkhaus (412998)
Dessie Salilew-Wondim (479277)
Ernst Tholen (79379)
Christian Looft (413001)
Michael Hölker (79376)
Karl Schellander (79383)
Muhammad Jasim Uddin (413002)

March 2015

<p>F: Forward primer; R: Reverse primer; bp: base pair.</p><p>List of primer sequences used in this ...

Primers sequence.

Meijiao He (666387)
Yongtai Gong (666388)
Jing Shi (16730)
Zhenwei Pan (296083)
Hui Zou (666389)
Danghui Sun (666390)
Xin Tu (205018)
Xiangyang Tan (402544)
Jianqiang Li (390212)
Weimin Li (131040)
Bin Liu (5899)
Jingyi Xue (338024)
Li Sheng (118074)
Chunhong Xiu (666391)
Ning Yang (114965)
Hongjie Xue (666392)
Xue Ding (666393)
Chengyuan Yu (666394)
Yue Li (102191)

November 2014

<p>RT, RT primers; FP, forward primer; RP, reverse primer.</p><p>Primers sequence.</p

Primer sequences.

Omkaram Gangisetty (663676)
Rola Bekdash (663677)
George Maglakelidze (663678)
Dipak K. Sarkar (307352)

November 2014

<p>Forward primer (FP), Reverse primer (RP), Methyl forward primer (MFP), Methyl reverse primer (MRP...

Sequences of the primers used in the reverse transcription and RT-PCR.

Dong Li (212687)
Long Ji (622763)
Lianbo Liu (622764)
Yizhi Liu (90863)
Haifeng Hou (622765)
Kunkun Yu (622766)
Qiang Sun (225630)
Zhongtang Zhao (520419)

August 2014

<p><b>RT:</b> reverse-transcription; F: forward primer; R: reverse primer.</p><p>Sequences of the pr...

Forward and reverse primer sequences, product sizes and accession numbers for genes analyzed by qRT-PCR. bp: base pairs.

Kirsten Hogg (283182)
Charlotte Wood (344407)
Alan S. McNeilly (70318)
W. Colin Duncan (209189)

February 2013

<p>Forward and reverse primer sequences, product sizes and accession numbers for genes analyzed by q...

Sequences of the primers employed for <i>BRAF<sup>V600E</sup></i> analysis.

Luigi Laghi (17644)
Stefania Beghelli (306462)
Antonino Spinelli (306464)
Paolo Bianchi (17641)
Gianluca Basso (306465)
Giuseppe Di Caro (306466)
Anna Brecht (306468)
Giuseppe Celesti (306470)
Giona Turri (306472)
Samantha Bersani (306474)
Guido Schumacher (306476)
Christoph Röcken (170345)
Ilona Gräntzdörffer (306477)
Massimo Roncalli (17647)
Alessandro Zerbi (306478)
Peter Neuhaus (74029)
Claudio Bassi (306480)
Marco Montorsi (306482)
Aldo Scarpa (242345)
Alberto Malesci (17643)

February 2013

<p>Sequences of the primers employed for <i>BRAF<sup>V600E</sup></i> analysis.</p

List of forward and reverse primers (from 5′ to 3′) used in Real-time PCR analysis.

Regina Hoo (673911)
Jian Hang Lam (546775)
Ludovic Huot (120251)
Aakanksha Pant (673912)
Rui Li (4631)
David Hot (120264)
Sylvie Alonso (284565)

December 2014

<p>List of forward and reverse primers (from 5′ to 3′) used in Real-time PCR analysis.</p

Primer sequences used to analyze <i>MMR</i>.

Gloria Perazzoli (811155)
Jose Prados (778445)
Raul Ortiz (778443)
Octavio Caba (811156)
Laura Cabeza (811157)
Maria Berdasco (5665351)
Beatriz Gónzalez (5665354)
Consolación Melguizo (5665357)

October 2015

<p>All primers are written in a 5' to 3' direction and grouped according to pairs. F, forward primer...

Primer sequences used in the study, NCBI reference sequences, and amplicon sizes (base pairs).

Daniela Gabbia (406250)
Luisa Pozzo (4593601)
Giorgia Zigiotto (5787290)
Marco Roverso (5787293)
Diana Sacchi (5787296)
Arianna Dalla Pozza (5787299)
Maria Carrara (2211856)
Sara Bogialli (1598125)
Annarosa Floreani (5787302)
Maria Guido (204356)
Sara De Martin (406249)

September 2018

Primer sequences used in the study, NCBI reference sequences, and amplicon sizes (base pairs).</p

Sequences of the primers used in real-time polymerase chain reaction and reverse transcription.

Roman Moravčík (17145102)
Soňa Olejárová (17145105)
Jana Zlacká (17145108)
Iveta Herichová (12969233)

October 2023

Sequences of the primers used in real-time polymerase chain reaction and reverse transcription.</p

PCR primer sequences for SNP amplification and extension.

Jianhua Jin (537722)
Faming Lin (642086)
Shiyu Liao (589987)
Qiyu Bao (8800)
Liyan Ni (129626)

October 2014

<p>F = Forward; R = Reverse; E = Extension.</p><p>PCR primer sequences for SNP amplification a...

Forward and reverse primer sequences used for quantitative real time PCR analyses.

Eva E. R. Philipp (133863)
Wiebke Wessels (133866)
Heike Gruber (133869)
Julia Strahl (133870)
Anika E. Wagner (133872)
Insa M. A. Ernst (133876)
Gerald Rimbach (133878)
Lars Kraemer (133880)
Stefan Schreiber (36915)
Doris Abele (133883)
Philip Rosenstiel (68103)

September 2012

<p>Forward and reverse primer sequences used for quantitative real time PCR analyses.</p

Sequence of primers used in the study to amplification segments for analysis of each SNP.

Mónica Alexandra Bustos (14725057)
Luz Dary Castañeda-Castañeda (14725060)
Carmen Rosa Acosta (14725063)
Diana García (14725066)
Diana Patricia Bohada (14725069)
Raúl Rodríguez (830321)
Martha Inírida Guerrero (13117365)

March 2023

Sequence of primers used in the study to amplification segments for analysis of each SNP.</p

Primer sequences (5’-3’) for methylation analysis.

Adriano Azevedo Mello (812698)
Mariana Ferreira Leal (147538)
Juan Antonio Rey (394565)
Giovanny Rebouças Pinto (394568)
Leticia Martins Lamarão (4909240)
Raquel Carvalho Montenegro (229884)
Ana Paula Negreiros Nunes Alves (812699)
Paulo Pimentel Assumpção (147541)
Barbara do Nascimento Borges (5222315)
Marília Cardoso Smith (570268)
Rommel Rodriguez Burbano (3279684)

October 2015

<p>MSP: primers for methyl-specific PCR; BSP: primers for Bisulfite Sequencing PCR; M: primer for me...

Primers used in this study.

Yueqiang Leng (276522)
Shaobin Zhong (4258)

May 2015

<p>*Underlined sequences are complementary to M13F and M13R sequences, respectively.</p><p>Primers u...