<p>A q-value cutoff of 0.05 was used to select enriched gene sets in all three tissues. The heat map represents the Z-scores obtained from a parametric analysis of gene set enrichment q-values for term enrichment. Red represents enriched genes in the treatment group that were over-represented compared with the control set. Blue represents the enriched genes in the treatment group that were under-represented compared with the control set. The absolute values represent the enrichment level. The bar represents the Z-score region from -3 to 3.</p
Thirty cells were sampled for each cluster. Each vertical line represents scaled z-score value of ge...
<p>The relative mRNA abundance of four selected HD-ZIP genes was normalized with respect to two refe...
<p>(A) and (B) Fold enrichment for down-regulated (A) and up-regulated (B) genes for 283 TE families...
<p>(<b>A</b>) Up-regulated genes. (<b>B</b>) Down-regulated genes. Genes up or down-regulated by tem...
<p>Differentially expressed genes displaying a 2.0 fold or more increase in microarray measurement l...
<p>Up-regulated (red) and down-regulated (green) genes were quantified (A). The ten comparison resul...
<p>The weight value obtained from the WGCNA package was used as a parameter for the parametric analy...
<p>The heatmap was created by MultiExperiment Viewer based on the log2-transformed values of the rel...
<p>The relative mRNA abundance of 20 selected C2HC2-ZF genes was normalized with respect to the refe...
<p>The expression levels of genes are presented using fold-change values transformed to log<sub>2</s...
<p>The relative mRNA abundance of 12 selected HD-Zip genes was normalized with respect to the refere...
<p>The relative mRNA abundance of 44 selected C2HC2-ZF genes was normalized with respect to the refe...
<p>The heat map represents the hierarchical clustering of 49 genes being differentially expressed ac...
<p>(A) The number of up-/down-regulated genes under four abiotic stresses. Vertical axis indicated t...
<p>Each plot contains all identified transcripts (grey dots), as well as the analysis-specific DE tr...
Thirty cells were sampled for each cluster. Each vertical line represents scaled z-score value of ge...
<p>The relative mRNA abundance of four selected HD-ZIP genes was normalized with respect to two refe...
<p>(A) and (B) Fold enrichment for down-regulated (A) and up-regulated (B) genes for 283 TE families...
<p>(<b>A</b>) Up-regulated genes. (<b>B</b>) Down-regulated genes. Genes up or down-regulated by tem...
<p>Differentially expressed genes displaying a 2.0 fold or more increase in microarray measurement l...
<p>Up-regulated (red) and down-regulated (green) genes were quantified (A). The ten comparison resul...
<p>The weight value obtained from the WGCNA package was used as a parameter for the parametric analy...
<p>The heatmap was created by MultiExperiment Viewer based on the log2-transformed values of the rel...
<p>The relative mRNA abundance of 20 selected C2HC2-ZF genes was normalized with respect to the refe...
<p>The expression levels of genes are presented using fold-change values transformed to log<sub>2</s...
<p>The relative mRNA abundance of 12 selected HD-Zip genes was normalized with respect to the refere...
<p>The relative mRNA abundance of 44 selected C2HC2-ZF genes was normalized with respect to the refe...
<p>The heat map represents the hierarchical clustering of 49 genes being differentially expressed ac...
<p>(A) The number of up-/down-regulated genes under four abiotic stresses. Vertical axis indicated t...
<p>Each plot contains all identified transcripts (grey dots), as well as the analysis-specific DE tr...
Thirty cells were sampled for each cluster. Each vertical line represents scaled z-score value of ge...
<p>The relative mRNA abundance of four selected HD-ZIP genes was normalized with respect to two refe...
<p>(A) and (B) Fold enrichment for down-regulated (A) and up-regulated (B) genes for 283 TE families...