Additional file 9: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

A global phylogeny of Formica provides novel insights into the evolutionary origins and transitions of social parasitism in ants

Marek L. Borowiec
Stefan P. Cover
Christian Rabeling

April 2019

Data from publication "A global phylogeny of Formica provides novel insights into the evolutionary o...

Fig. 1 in Ultra-Conserved Element Phylogenomics of New World Ponera (Hymenoptera: Formicidae) Illuminates the Origin and Phylogeographic History of the Endemic Exotic Ant Ponera exotica

Branstetter, Michael G.
Longino, John T.

March 2019

Fig. 1. Phylogeny of NewWorld and selected Old World Ponera, inferred using the program IQ-TREE and ...

Fig. 9 in UCE Phylogenomics Resolves Major Relationships Among Ectaheteromorph Ants (Hymenoptera: Formicidae: Ectatomminae, Heteroponerinae): A New Classification For the Subfamilies and the Description of a New Genus

Camacho, G P
Franco, W
Branstetter, M G
Pie, M R
Longino, J T
Schultz, T R
Feitosa, R M

January 2022

Fig. 9. Dorsal view of mesosoma, showing: A) Promesonotal suture absent (Gnamptogenys acuminata—USNM...

Additional file 8: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Phylogenetic trees from analyses not illustrated in the main text. Additional results from Bayesian ...

Additional file 10: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Summary of taxon exclusion experiments. Summary sketches of phylogenetic relationships contrasting t...

Additional file 1: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Comprehensive description of methods. An extensive version of the methods section, giving a more det...

Additional file 2: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Genbank accessions for PCR-amplified sequences included in this study. Table including specimen iden...

Additional file 5: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Dispersal constraint matrices used for DEC and S-DEC analyses in RASP. (PDF 75Â kb

Additional file 3: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Calibration points used to define prior calibration densities for dating analyses with BEAST. (PDF 9...

Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Blaimer, Bonnie B
Brady, Seán G
Schultz, Ted R
Lloyd, Michael W
Fisher, Brian L
Ward, Philip S

December 2015

BackgroundUltraconserved elements (UCEs) have been successfully used in phylogenomics for a variety ...

Additional file 9: of Elusive ditrysian phylogeny: an account of combining systematized morphology with molecular data (Lepidoptera)

Maria HeikkilĂ¤ (3505547)
Marko Mutanen (127088)
Niklas Wahlberg (7740)
Pasi Sihvonen (218934)
Lauri Kaila (218937)

November 2015

Phylogenetic tree from maximum likelihood analysis of combined morphological and molecular data, 473...

Data from: Convergent evolution of the army ant syndrome and congruence in big-data phylogenetics

Borowiec, Marek L.

January 2019

Army ants are a charismatic group of organisms characterized by a suite of morphological and behavio...

Additional file 3: of Phylogenomic analysis of Apoidea sheds new light on the sister group of bees

Manuela Sann (5237537)
Oliver Niehuis (153801)
Ralph Peters (3399620)
Christoph Mayer (57204)
Alexey Kozlov (5237534)
Lars Podsiadlowski (21724)
Sarah Bank (4519429)
Karen Meusemann (216039)
Bernhard Misof (153798)
Christoph Bleidorn (187253)
Michael Ohl (586920)

May 2018

Table 1. Information on grouping of species in a given quartet when assessing the phylogenetic posit...

Additional file 10: of Deep divergence and rapid evolutionary rates in gut-associated Acetobacteraceae of ants

Bryan Brown (174875)
Jennifer Wernegreen (3484133)

July 2016

Alignment file of 1,333 nucleotides and 36 taxa. This alignment was used for phylogenetic inference ...

Phylogeography in Response to Reproductive Strategies and Ecogeographic Isolation in Ant Species on Madagascar: Genus Mystrium (Formicidae: Amblyoponinae)

Natalie r. Graham (697792)

December 2015

<p>Nexus file from four gene nuclear phylogeny (long-wavelength rhodopsin, 28s, wingless and abdomin...

A global phylogeny of Formica provides novel insights into the evolutionary origins and transitions of social parasitism in ants

Marek L. Borowiec
Stefan P. Cover
Christian Rabeling

April 2019

Data from publication "A global phylogeny of Formica provides novel insights into the evolutionary o...

Fig. 1 in Ultra-Conserved Element Phylogenomics of New World Ponera (Hymenoptera: Formicidae) Illuminates the Origin and Phylogeographic History of the Endemic Exotic Ant Ponera exotica

Branstetter, Michael G.
Longino, John T.

March 2019

Fig. 1. Phylogeny of NewWorld and selected Old World Ponera, inferred using the program IQ-TREE and ...

Fig. 9 in UCE Phylogenomics Resolves Major Relationships Among Ectaheteromorph Ants (Hymenoptera: Formicidae: Ectatomminae, Heteroponerinae): A New Classification For the Subfamilies and the Description of a New Genus

Camacho, G P
Franco, W
Branstetter, M G
Pie, M R
Longino, J T
Schultz, T R
Feitosa, R M

January 2022

Fig. 9. Dorsal view of mesosoma, showing: A) Promesonotal suture absent (Gnamptogenys acuminata—USNM...

Additional file 8: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Phylogenetic trees from analyses not illustrated in the main text. Additional results from Bayesian ...

Additional file 10: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Summary of taxon exclusion experiments. Summary sketches of phylogenetic relationships contrasting t...

Additional file 1: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Comprehensive description of methods. An extensive version of the methods section, giving a more det...

Additional file 2: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Genbank accessions for PCR-amplified sequences included in this study. Table including specimen iden...

Additional file 5: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Dispersal constraint matrices used for DEC and S-DEC analyses in RASP. (PDF 75Â kb

Additional file 3: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Calibration points used to define prior calibration densities for dating analyses with BEAST. (PDF 9...

Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Blaimer, Bonnie B
Brady, Seán G
Schultz, Ted R
Lloyd, Michael W
Fisher, Brian L
Ward, Philip S

December 2015

BackgroundUltraconserved elements (UCEs) have been successfully used in phylogenomics for a variety ...

Additional file 9: of Elusive ditrysian phylogeny: an account of combining systematized morphology with molecular data (Lepidoptera)

Maria HeikkilĂ¤ (3505547)
Marko Mutanen (127088)
Niklas Wahlberg (7740)
Pasi Sihvonen (218934)
Lauri Kaila (218937)

November 2015

Phylogenetic tree from maximum likelihood analysis of combined morphological and molecular data, 473...

Data from: Convergent evolution of the army ant syndrome and congruence in big-data phylogenetics

Borowiec, Marek L.

January 2019

Army ants are a charismatic group of organisms characterized by a suite of morphological and behavio...

Additional file 3: of Phylogenomic analysis of Apoidea sheds new light on the sister group of bees

Manuela Sann (5237537)
Oliver Niehuis (153801)
Ralph Peters (3399620)
Christoph Mayer (57204)
Alexey Kozlov (5237534)
Lars Podsiadlowski (21724)
Sarah Bank (4519429)
Karen Meusemann (216039)
Bernhard Misof (153798)
Christoph Bleidorn (187253)
Michael Ohl (586920)

May 2018

Table 1. Information on grouping of species in a given quartet when assessing the phylogenetic posit...

Additional file 10: of Deep divergence and rapid evolutionary rates in gut-associated Acetobacteraceae of ants

Bryan Brown (174875)
Jennifer Wernegreen (3484133)

July 2016

Alignment file of 1,333 nucleotides and 36 taxa. This alignment was used for phylogenetic inference ...

Phylogeography in Response to Reproductive Strategies and Ecogeographic Isolation in Ant Species on Madagascar: Genus Mystrium (Formicidae: Amblyoponinae)

Natalie r. Graham (697792)

December 2015

<p>Nexus file from four gene nuclear phylogeny (long-wavelength rhodopsin, 28s, wingless and abdomin...

A global phylogeny of Formica provides novel insights into the evolutionary origins and transitions of social parasitism in ants

Marek L. Borowiec
Stefan P. Cover
Christian Rabeling

April 2019

Data from publication "A global phylogeny of Formica provides novel insights into the evolutionary o...

Fig. 1 in Ultra-Conserved Element Phylogenomics of New World Ponera (Hymenoptera: Formicidae) Illuminates the Origin and Phylogeographic History of the Endemic Exotic Ant Ponera exotica

Branstetter, Michael G.
Longino, John T.

March 2019

Fig. 1. Phylogeny of NewWorld and selected Old World Ponera, inferred using the program IQ-TREE and ...

Fig. 9 in UCE Phylogenomics Resolves Major Relationships Among Ectaheteromorph Ants (Hymenoptera: Formicidae: Ectatomminae, Heteroponerinae): A New Classification For the Subfamilies and the Description of a New Genus

Camacho, G P
Franco, W
Branstetter, M G
Pie, M R
Longino, J T
Schultz, T R
Feitosa, R M

January 2022

Fig. 9. Dorsal view of mesosoma, showing: A) Promesonotal suture absent (Gnamptogenys acuminata—USNM...

Additional file 9: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Abstract

Extracted data

Additional file 9: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Abstract

Extracted data

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