Table S4. Parsimonious gene sets of MCC performance. The file provides all the gene sets of four filters over eleven datasets based on MCC measurement from Tables 5 and 7. (XLSX 19 kb
Table S5. Mann-Whitney p-values of 16 pairwise random walk comparisons among the 676 functional cate...
GWAS information. Table S2. SMR results (P SMR <8.4 × 10–6). Table S3. SMR and HEIDI results (P HEID...
Additional file 3: Table S3. IEI Candidate Genes with Average in all Immune Cells > 0 TPM Filter
Table S3. Parsimonious gene sets of AUC performance. The file provides all the gene sets of four fil...
Table S5. Candidate genes. The file provides all the candidate genes selected by four filters over e...
Table S7. GSEA Results. The file provides the details of all the enrichment groups and genes summari...
Table S6. Collapsed Genes. The file is a supplement to Table 9 to provide all the collapsed genes ov...
Table S1. Number of significantly enriched gene sets using top 100 genes from each feature score. Th...
Table with detailed results of surrogate sensitivity, false positive rate and evaluation time for ev...
Table S2. List of genes differentially expressed used in the case studies. (XLSX 75 kb
Table S5. Predicted results of miREM using different HP p-values and EM parameters. (XLSX 115 kb
Table S3. Predicted breast cancer driver genes by the seven permutation models. Table S4. Predicted ...
Preliminary set of genes with primer sequences for screening based on literature search. Additional ...
Breast cancer gene signature. The full list of 232 genes (probesets) and their ranks for the optimal...
The file contains three sheets labelled Table S1 - S3. The tables list the genes that are currently ...
Table S5. Mann-Whitney p-values of 16 pairwise random walk comparisons among the 676 functional cate...
GWAS information. Table S2. SMR results (P SMR <8.4 × 10–6). Table S3. SMR and HEIDI results (P HEID...
Additional file 3: Table S3. IEI Candidate Genes with Average in all Immune Cells > 0 TPM Filter
Table S3. Parsimonious gene sets of AUC performance. The file provides all the gene sets of four fil...
Table S5. Candidate genes. The file provides all the candidate genes selected by four filters over e...
Table S7. GSEA Results. The file provides the details of all the enrichment groups and genes summari...
Table S6. Collapsed Genes. The file is a supplement to Table 9 to provide all the collapsed genes ov...
Table S1. Number of significantly enriched gene sets using top 100 genes from each feature score. Th...
Table with detailed results of surrogate sensitivity, false positive rate and evaluation time for ev...
Table S2. List of genes differentially expressed used in the case studies. (XLSX 75 kb
Table S5. Predicted results of miREM using different HP p-values and EM parameters. (XLSX 115 kb
Table S3. Predicted breast cancer driver genes by the seven permutation models. Table S4. Predicted ...
Preliminary set of genes with primer sequences for screening based on literature search. Additional ...
Breast cancer gene signature. The full list of 232 genes (probesets) and their ranks for the optimal...
The file contains three sheets labelled Table S1 - S3. The tables list the genes that are currently ...
Table S5. Mann-Whitney p-values of 16 pairwise random walk comparisons among the 676 functional cate...
GWAS information. Table S2. SMR results (P SMR <8.4 × 10–6). Table S3. SMR and HEIDI results (P HEID...
Additional file 3: Table S3. IEI Candidate Genes with Average in all Immune Cells > 0 TPM Filter
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