Additional file 1: Table S1. of Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR)

Additional file 3: Document 1. of Population differentiation in allele frequencies of obesity-associated SNPs

Linyong Mao (184164)
Yayin Fang (4586473)
Michael Campbell (562588)
William Southerland (4586470)

November 2017

Population-level average of composite genetic risk scores and allele frequencies. The document illus...

Additional file 5: Figure S2. of Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity

Rishika De (3518948)
Ting Hu (110925)
Jason Moore (377082)
Diane Gilbert-Diamond (425358)

December 2015

Null distribution of heterophilicity values of SH2B1 from 1000 permuted networks. Null distribution ...

Table_1_Genome-Wide Interaction and Pathway Association Studies for Body Mass Index.DOC

Hongxiao Jiao (787972)
Yong Zang (5773367)
Miaomiao Zhang (170754)
Yuan Zhang (41832)
Yaogang Wang (838346)
Kai Wang (21246)
R. Arlen Price (6652190)
Wei-Dong Li (223291)

May 2019

Objective: We investigated gene interactions (epistasis) for body mass index (BMI) in a European-Ame...

Additional file 4: Table S3. of Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR)

Rishika De (3518948)
Shefali Verma (3518951)
Fotios Drenos (113686)
Emily Holzinger (619708)
Michael Holmes (1490563)
Molly Hall (3518942)
David Crosslin (3518945)
David Carrell (449597)
Hakon Hakonarson (102913)
Gail Jarvik (3518954)
Eric Larson (391725)
Jennifer Pacheco (667678)
Laura Rasmussen-Torvik (3473966)
Carrie Moore (58598)
Folkert Asselbergs (3246126)
Jason Moore (377082)
Marylyn Ritchie (102183)
Brendan Keating (56416)
Diane Gilbert-Diamond (425358)

December 2015

Details of LD expanded models. Number of LD-expanded (proxy) SNP-SNP models generated for each origi...

Additional file 6:Â Additional Acknowledgements. of Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR)

Rishika De (3518948)
Shefali Verma (3518951)
Fotios Drenos (113686)
Emily Holzinger (619708)
Michael Holmes (1490563)
Molly Hall (3518942)
David Crosslin (3518945)
David Carrell (449597)
Hakon Hakonarson (102913)
Gail Jarvik (3518954)
Eric Larson (391725)
Jennifer Pacheco (667678)
Laura Rasmussen-Torvik (3473966)
Carrie Moore (58598)
Folkert Asselbergs (3246126)
Jason Moore (377082)
Marylyn Ritchie (102183)
Brendan Keating (56416)
Diane Gilbert-Diamond (425358)

December 2015

Acknowledgements and detailed descriptions of the five studies that provided the data for the analys...

Additional file 5: Table S4. of Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR)

Rishika De (3518948)
Shefali Verma (3518951)
Fotios Drenos (113686)
Emily Holzinger (619708)
Michael Holmes (1490563)
Molly Hall (3518942)
David Crosslin (3518945)
David Carrell (449597)
Hakon Hakonarson (102913)
Gail Jarvik (3518954)
Eric Larson (391725)
Jennifer Pacheco (667678)
Laura Rasmussen-Torvik (3473966)
Carrie Moore (58598)
Folkert Asselbergs (3246126)
Jason Moore (377082)
Marylyn Ritchie (102183)
Brendan Keating (56416)
Diane Gilbert-Diamond (425358)

December 2015

Results from QMDR association analysis of main effect filtered SNP-SNP models replicated in eMERGE d...

Additional file 1: Table S1. of Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity

Rishika De (3518948)
Ting Hu (110925)
Jason Moore (377082)
Diane Gilbert-Diamond (425358)

December 2015

Gene categorization. Shown here are the chromosomal locations (NCBI build 36) used to assign a SNP t...

Additional file 1: Table S1. of Predicting gene targets from integrative analyses of summary data from GWAS and eQTL studies for 28 human complex traits

Jennifer Pavlides (3449879)
Zhihong Zhu (227325)
Jacob Gratten (3300798)
Allan McRae (3400103)
Naomi Wray (3449882)
Jian Yang (12136)

August 2016

GWAS information. Table S2. SMR results (P SMR <8.4 × 10–6). Table S3. SMR and HEIDI results (P HEID...

Additional file 1: Table S1. of Population differentiation in allele frequencies of obesity-associated SNPs

Linyong Mao (184164)
Yayin Fang (4586473)
Michael Campbell (562588)
William Southerland (4586470)

November 2017

Effect allele frequencies in 26 populations for obesity SNPs. The table lists 225 obesity-associated...

Additional file 1: Table S1. of Multiethnic genome-wide association study identifies ethnic-specific associations with body mass index in Hispanics and African Americans

Yasmmyn Salinas (3533240)
Leyao Wang (837838)
Andrew DeWan (264155)

June 2016

Unadjusted associations between participant characteristics and BMI across the MESA ethnic groups. (...

Additional file 10: Figure S6. of Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity

Rishika De (3518948)
Ting Hu (110925)
Jason Moore (377082)
Diane Gilbert-Diamond (425358)

December 2015

Frequency distribution of node betweenness centrality values within the SEN. Frequency distribution ...

Additional file 9: Figure S5. of Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity

Rishika De (3518948)
Ting Hu (110925)
Jason Moore (377082)
Diane Gilbert-Diamond (425358)

December 2015

Frequency distribution of node degree values within the SEN. Frequency distribution of node degree o...

Additional file 1: of The integration of weighted human gene association networks based on link prediction

Jian Yang (12136)
Tinghong Yang (3703315)
Duzhi Wu (3703318)
Limei Lin (206497)
Fan Yang (1413)
Jing Zhao (21160)

January 2017

The Integration of Weighted Human Gene Association Networks Based on Link Prediction. Table S1. The ...

Additional file 11: Figure S7. of Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity

Rishika De (3518948)
Ting Hu (110925)
Jason Moore (377082)
Diane Gilbert-Diamond (425358)

December 2015

Frequency distribution of node closeness centrality values within the SEN. Frequency distribution of...

Additional file 1: Table S1. of Chromosomal microarray analysis in the genetic evaluation of 279 patients with syndromic obesity

Carla DâAngelo (4823349)
Monica Varela (4823334)
Claudia de Castro (4823340)
Paulo Otto (3505370)
Ana Perez (4823337)
Charles LourenĂ§o (4823346)
Chong Kim (3411230)
Debora Bertola (206523)
Fernando Kok (3505364)
Luis Garcia-Alonso (152388)
Celia Koiffmann (4823343)

February 2018

Full description of clinical findings in patients enrolled in this study. (XLSX 71 kb

Additional file 3: Document 1. of Population differentiation in allele frequencies of obesity-associated SNPs

Linyong Mao (184164)
Yayin Fang (4586473)
Michael Campbell (562588)
William Southerland (4586470)

November 2017

Population-level average of composite genetic risk scores and allele frequencies. The document illus...

Additional file 5: Figure S2. of Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity

Rishika De (3518948)
Ting Hu (110925)
Jason Moore (377082)
Diane Gilbert-Diamond (425358)

December 2015

Null distribution of heterophilicity values of SH2B1 from 1000 permuted networks. Null distribution ...

Table_1_Genome-Wide Interaction and Pathway Association Studies for Body Mass Index.DOC

Hongxiao Jiao (787972)
Yong Zang (5773367)
Miaomiao Zhang (170754)
Yuan Zhang (41832)
Yaogang Wang (838346)
Kai Wang (21246)
R. Arlen Price (6652190)
Wei-Dong Li (223291)

May 2019

Objective: We investigated gene interactions (epistasis) for body mass index (BMI) in a European-Ame...

Additional file 4: Table S3. of Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR)

Rishika De (3518948)
Shefali Verma (3518951)
Fotios Drenos (113686)
Emily Holzinger (619708)
Michael Holmes (1490563)
Molly Hall (3518942)
David Crosslin (3518945)
David Carrell (449597)
Hakon Hakonarson (102913)
Gail Jarvik (3518954)
Eric Larson (391725)
Jennifer Pacheco (667678)
Laura Rasmussen-Torvik (3473966)
Carrie Moore (58598)
Folkert Asselbergs (3246126)
Jason Moore (377082)
Marylyn Ritchie (102183)
Brendan Keating (56416)
Diane Gilbert-Diamond (425358)

December 2015

Details of LD expanded models. Number of LD-expanded (proxy) SNP-SNP models generated for each origi...

Additional file 6:Â Additional Acknowledgements. of Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR)

Rishika De (3518948)
Shefali Verma (3518951)
Fotios Drenos (113686)
Emily Holzinger (619708)
Michael Holmes (1490563)
Molly Hall (3518942)
David Crosslin (3518945)
David Carrell (449597)
Hakon Hakonarson (102913)
Gail Jarvik (3518954)
Eric Larson (391725)
Jennifer Pacheco (667678)
Laura Rasmussen-Torvik (3473966)
Carrie Moore (58598)
Folkert Asselbergs (3246126)
Jason Moore (377082)
Marylyn Ritchie (102183)
Brendan Keating (56416)
Diane Gilbert-Diamond (425358)

December 2015

Acknowledgements and detailed descriptions of the five studies that provided the data for the analys...

Additional file 5: Table S4. of Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR)

Rishika De (3518948)
Shefali Verma (3518951)
Fotios Drenos (113686)
Emily Holzinger (619708)
Michael Holmes (1490563)
Molly Hall (3518942)
David Crosslin (3518945)
David Carrell (449597)
Hakon Hakonarson (102913)
Gail Jarvik (3518954)
Eric Larson (391725)
Jennifer Pacheco (667678)
Laura Rasmussen-Torvik (3473966)
Carrie Moore (58598)
Folkert Asselbergs (3246126)
Jason Moore (377082)
Marylyn Ritchie (102183)
Brendan Keating (56416)
Diane Gilbert-Diamond (425358)

December 2015

Results from QMDR association analysis of main effect filtered SNP-SNP models replicated in eMERGE d...

Additional file 1: Table S1. of Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity

Rishika De (3518948)
Ting Hu (110925)
Jason Moore (377082)
Diane Gilbert-Diamond (425358)

December 2015

Gene categorization. Shown here are the chromosomal locations (NCBI build 36) used to assign a SNP t...

Additional file 1: Table S1. of Predicting gene targets from integrative analyses of summary data from GWAS and eQTL studies for 28 human complex traits

Jennifer Pavlides (3449879)
Zhihong Zhu (227325)
Jacob Gratten (3300798)
Allan McRae (3400103)
Naomi Wray (3449882)
Jian Yang (12136)

August 2016

GWAS information. Table S2. SMR results (P SMR <8.4 × 10–6). Table S3. SMR and HEIDI results (P HEID...

Additional file 1: Table S1. of Population differentiation in allele frequencies of obesity-associated SNPs

Linyong Mao (184164)
Yayin Fang (4586473)
Michael Campbell (562588)
William Southerland (4586470)

November 2017

Effect allele frequencies in 26 populations for obesity SNPs. The table lists 225 obesity-associated...

Additional file 1: Table S1. of Multiethnic genome-wide association study identifies ethnic-specific associations with body mass index in Hispanics and African Americans

Yasmmyn Salinas (3533240)
Leyao Wang (837838)
Andrew DeWan (264155)

June 2016

Unadjusted associations between participant characteristics and BMI across the MESA ethnic groups. (...

Additional file 10: Figure S6. of Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity

Rishika De (3518948)
Ting Hu (110925)
Jason Moore (377082)
Diane Gilbert-Diamond (425358)

December 2015

Frequency distribution of node betweenness centrality values within the SEN. Frequency distribution ...

Additional file 9: Figure S5. of Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity

Rishika De (3518948)
Ting Hu (110925)
Jason Moore (377082)
Diane Gilbert-Diamond (425358)

December 2015

Frequency distribution of node degree values within the SEN. Frequency distribution of node degree o...

Additional file 1: of The integration of weighted human gene association networks based on link prediction

Jian Yang (12136)
Tinghong Yang (3703315)
Duzhi Wu (3703318)
Limei Lin (206497)
Fan Yang (1413)
Jing Zhao (21160)

January 2017

The Integration of Weighted Human Gene Association Networks Based on Link Prediction. Table S1. The ...

Additional file 11: Figure S7. of Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity

Rishika De (3518948)
Ting Hu (110925)
Jason Moore (377082)
Diane Gilbert-Diamond (425358)

December 2015

Frequency distribution of node closeness centrality values within the SEN. Frequency distribution of...

Additional file 1: Table S1. of Chromosomal microarray analysis in the genetic evaluation of 279 patients with syndromic obesity

Carla DâAngelo (4823349)
Monica Varela (4823334)
Claudia de Castro (4823340)
Paulo Otto (3505370)
Ana Perez (4823337)
Charles LourenĂ§o (4823346)
Chong Kim (3411230)
Debora Bertola (206523)
Fernando Kok (3505364)
Luis Garcia-Alonso (152388)
Celia Koiffmann (4823343)

February 2018

Full description of clinical findings in patients enrolled in this study. (XLSX 71 kb

Additional file 3: Document 1. of Population differentiation in allele frequencies of obesity-associated SNPs

Linyong Mao (184164)
Yayin Fang (4586473)
Michael Campbell (562588)
William Southerland (4586470)

November 2017

Population-level average of composite genetic risk scores and allele frequencies. The document illus...

Additional file 5: Figure S2. of Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity

Rishika De (3518948)
Ting Hu (110925)
Jason Moore (377082)
Diane Gilbert-Diamond (425358)

December 2015

Null distribution of heterophilicity values of SH2B1 from 1000 permuted networks. Null distribution ...

Table_1_Genome-Wide Interaction and Pathway Association Studies for Body Mass Index.DOC

Hongxiao Jiao (787972)
Yong Zang (5773367)
Miaomiao Zhang (170754)
Yuan Zhang (41832)
Yaogang Wang (838346)
Kai Wang (21246)
R. Arlen Price (6652190)
Wei-Dong Li (223291)

May 2019

Objective: We investigated gene interactions (epistasis) for body mass index (BMI) in a European-Ame...

Additional file 1: Table S1. of Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR)

Abstract

Extracted data

Additional file 1: Table S1. of Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR)

Abstract

Extracted data

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