Box-and-whisker plots of DNA methylation values in graft donors in the discovery cohort assessed using MethyLight and 450K arrays. Only HSCT donors of the discovery cohort that were profiled on both assay platforms are shown. We identified a DNA hypomethylation phenotype at the top-ranked DMP cg20475486 in graft donors matched to recipients with severe aGVHD. HSCT donors matched to healthy recipients and those matched to recipients diagnosed with mild aGVHD could not be discriminated. (PDF 256 kb
Figure S1. Overview of the EvoImmunoPop experimental setting. Figure S2. Exploring the non-linear ef...
DNA methylation is thought to be an important determinant of human phenotypic variation, but its inh...
Materials and methods. Table S1. Primer sequences. Table S2. Clonality detected in the two patients ...
Quality assessment of the Illumina Infinium HumanMethylation450 assay. The quality of the 450K array...
Estimation of differential leukocyte counts. For each sample, the composition of major leukocyte cel...
Figure S1. DNA methylation in the genomic region mapping on CD34 gene in donors (to) and in receivin...
Table S3. Hypo- and Hyper-methylated genes deriving from p2 t4 vs all other t4 patients comparisons....
Ontology annotation of genes flanking DMRs using GREAT. We report the ontology of genes flanking the...
Background Allogeneic hematopoietic stem cell transplantation (HSCT) is a curative treatment for man...
Table S2. Differentially methylated CpGs in iPSC-derived HPCs versus CD34+ cells. Promoter-associate...
Figure S2. Enrichment of hyper- and hypomethylated CpG sites in iPSC-derived HPCs. Changes in DNA me...
Figure S3. Comparison of differentially methylated CpG sites across different cell types. Heatmap of...
Allogeneic hematopoietic cell transplantation (HCT) is used to treat many blood-based disorders and ...
Figures S2. Box plots showing the distribution of beta values in cg05784862(KSR1), cg07154254(ELF3),...
Figure S1. A Manhattan plot showing all individual CpG sites and their p values. Figure S2A-P. Diffe...
Figure S1. Overview of the EvoImmunoPop experimental setting. Figure S2. Exploring the non-linear ef...
DNA methylation is thought to be an important determinant of human phenotypic variation, but its inh...
Materials and methods. Table S1. Primer sequences. Table S2. Clonality detected in the two patients ...
Quality assessment of the Illumina Infinium HumanMethylation450 assay. The quality of the 450K array...
Estimation of differential leukocyte counts. For each sample, the composition of major leukocyte cel...
Figure S1. DNA methylation in the genomic region mapping on CD34 gene in donors (to) and in receivin...
Table S3. Hypo- and Hyper-methylated genes deriving from p2 t4 vs all other t4 patients comparisons....
Ontology annotation of genes flanking DMRs using GREAT. We report the ontology of genes flanking the...
Background Allogeneic hematopoietic stem cell transplantation (HSCT) is a curative treatment for man...
Table S2. Differentially methylated CpGs in iPSC-derived HPCs versus CD34+ cells. Promoter-associate...
Figure S2. Enrichment of hyper- and hypomethylated CpG sites in iPSC-derived HPCs. Changes in DNA me...
Figure S3. Comparison of differentially methylated CpG sites across different cell types. Heatmap of...
Allogeneic hematopoietic cell transplantation (HCT) is used to treat many blood-based disorders and ...
Figures S2. Box plots showing the distribution of beta values in cg05784862(KSR1), cg07154254(ELF3),...
Figure S1. A Manhattan plot showing all individual CpG sites and their p values. Figure S2A-P. Diffe...
Figure S1. Overview of the EvoImmunoPop experimental setting. Figure S2. Exploring the non-linear ef...
DNA methylation is thought to be an important determinant of human phenotypic variation, but its inh...
Materials and methods. Table S1. Primer sequences. Table S2. Clonality detected in the two patients ...