Comparison of OTU picking methods (using a subset of data comprising 108,047 sequences)
Background: The Tasmanian devil, the world’s largest carnivorous marsupial, is at risk of extinction...
Phylogeny of XC family chemokines from devil, opossum and human. Description of data: XC family chem...
OTU read numbers and taxonomic assignments. The file contains of discovered OTUs in each replicate, ...
Taxonomic composition of 56 microbiome samples at phylum, class, order, family and genus levels
Estimated taxonomic composition (0.85 similarity cut-off level) of oral sequences with low similarit...
List of OTUs that showed significantly different frequencies between wild and captive devils. Taxa w...
Unweighted and weighted UniFrac distances between samples from different geographic locations
Accession numbers for all data used in this study. Description of data: Table including accession nu...
Presence of Tasmanian devil sequences identified in this study in the devil transcriptomes. (CSV 957...
Additional cytokine sequences identified in the Tasmanian devil genome. Description of data: Md % = ...
Chemokine sequences identified in the Tasmanian devil genome. Description of data: Md % = percent am...
Interferon sequences identified in the Tasmanian devil genome. Description of data: Md % = percent a...
TCR constant regions identified in the Tasmanian devil genome. Description of data: Md % = percent a...
TNF family sequences identified in the devil genome. Description of data: Md % = percent amino acid ...
Additional file 3: Figure S2. Proportional abundances of species recovered from faeces samples after...
Background: The Tasmanian devil, the world’s largest carnivorous marsupial, is at risk of extinction...
Phylogeny of XC family chemokines from devil, opossum and human. Description of data: XC family chem...
OTU read numbers and taxonomic assignments. The file contains of discovered OTUs in each replicate, ...
Taxonomic composition of 56 microbiome samples at phylum, class, order, family and genus levels
Estimated taxonomic composition (0.85 similarity cut-off level) of oral sequences with low similarit...
List of OTUs that showed significantly different frequencies between wild and captive devils. Taxa w...
Unweighted and weighted UniFrac distances between samples from different geographic locations
Accession numbers for all data used in this study. Description of data: Table including accession nu...
Presence of Tasmanian devil sequences identified in this study in the devil transcriptomes. (CSV 957...
Additional cytokine sequences identified in the Tasmanian devil genome. Description of data: Md % = ...
Chemokine sequences identified in the Tasmanian devil genome. Description of data: Md % = percent am...
Interferon sequences identified in the Tasmanian devil genome. Description of data: Md % = percent a...
TCR constant regions identified in the Tasmanian devil genome. Description of data: Md % = percent a...
TNF family sequences identified in the devil genome. Description of data: Md % = percent amino acid ...
Additional file 3: Figure S2. Proportional abundances of species recovered from faeces samples after...
Background: The Tasmanian devil, the world’s largest carnivorous marsupial, is at risk of extinction...
Phylogeny of XC family chemokines from devil, opossum and human. Description of data: XC family chem...
OTU read numbers and taxonomic assignments. The file contains of discovered OTUs in each replicate, ...
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