Refined subtype labels and intrinsic probes. The refined breast cancer subtype labels defined for each sample in the METABRIC dataset are listed in Table S1. Table S2 shows the annotated probes selected in the CM1 list and the average occurrence of each probe. (XLSX 58 kb
Tumor, lymph node, metastasis (TNM) classification for defining subgroups of patients with locally a...
The clinical parameters of the tumors used in the 2D-DIGE analysis are given in this table: Sex, tum...
Ranked list of significant probe sets up and down-regulated in MCF-7/Twist cells, primary tumors, an...
Classifiers Performance. The document contains information on the ensemble learning approach with re...
Figure S2. t-SNE plots showing subtype clustering of Luminal A cases in the TCGA cohort according to...
Additional file 1: Table 1. Intrinsic subtype defined at primary diagnosis or re-biopsy
Figure S6. Building TNBC subtyping classifier in METABRIC using common genes from TNBC signature gro...
Table S1. Number of patients for breast cancer subtype in the TCGA dataset according to IHC status. ...
Table S1. Top ten genes ranked by differences in gene expression between Tertile 1 (pure) and Tertil...
Figure S2. Gene Set Enrichment Analysis (GSEA) analysis between subtypes in breast cancer. (A-F) GSE...
Table S3. Molecular characteristics of Luminal A breast cancers in the TCGA cohort classified by sub...
Figure S3. Comparison of community classifications from each reconciliation method with intrinsic br...
The Cancer Genome Atlas (TCGA) and Molecular Taxonomy of Breast Cancer International Consortium (MET...
Figure S1. t-SNE plots for all subtypes in the TCGA cohort, showing: 1) luminal subtypes cluster rel...
Breast cancer datasets. Summary Tables of GEO datasets retrived and selected for inclusion into the ...
Tumor, lymph node, metastasis (TNM) classification for defining subgroups of patients with locally a...
The clinical parameters of the tumors used in the 2D-DIGE analysis are given in this table: Sex, tum...
Ranked list of significant probe sets up and down-regulated in MCF-7/Twist cells, primary tumors, an...
Classifiers Performance. The document contains information on the ensemble learning approach with re...
Figure S2. t-SNE plots showing subtype clustering of Luminal A cases in the TCGA cohort according to...
Additional file 1: Table 1. Intrinsic subtype defined at primary diagnosis or re-biopsy
Figure S6. Building TNBC subtyping classifier in METABRIC using common genes from TNBC signature gro...
Table S1. Number of patients for breast cancer subtype in the TCGA dataset according to IHC status. ...
Table S1. Top ten genes ranked by differences in gene expression between Tertile 1 (pure) and Tertil...
Figure S2. Gene Set Enrichment Analysis (GSEA) analysis between subtypes in breast cancer. (A-F) GSE...
Table S3. Molecular characteristics of Luminal A breast cancers in the TCGA cohort classified by sub...
Figure S3. Comparison of community classifications from each reconciliation method with intrinsic br...
The Cancer Genome Atlas (TCGA) and Molecular Taxonomy of Breast Cancer International Consortium (MET...
Figure S1. t-SNE plots for all subtypes in the TCGA cohort, showing: 1) luminal subtypes cluster rel...
Breast cancer datasets. Summary Tables of GEO datasets retrived and selected for inclusion into the ...
Tumor, lymph node, metastasis (TNM) classification for defining subgroups of patients with locally a...
The clinical parameters of the tumors used in the 2D-DIGE analysis are given in this table: Sex, tum...
Ranked list of significant probe sets up and down-regulated in MCF-7/Twist cells, primary tumors, an...