Additional file 6: of Genome-wide association mapping revealed a diverse genetic basis of seed dormancy across subpopulations in rice (Oryza sativa L.)

The Genome-wide association mapping results for Germination Percentage (GP) of the freshly harvested seeds (FHS) in whole, Aus, indica and japonica populations. The figure shows neighbor-joining tree, histogram of the phenotypes (GP), quantile-quantile plot of the expected null distribution and the observed P-value and the Manhattan plots of GP of freshly harvested seeds in populations using LMM and LR methods. (PDF 795 kb