Additional file 7: Table S4. of A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Additional file 5: of Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance

Chenglin Chai (45748)
Yongqin Wang (515167)
Trupti Joshi (51047)
Babu Valliyodan (131241)
Silvas Prince (3462488)
Lydia Michel (3543893)
Dong Xu (1234428)
Henry Nguyen (493314)

August 2015

Integration of TF ORFeome information into Soykb. On the TF-ORFeome data page in SoyKB (A), clicking...

Additional file 6: of Implications of ethylene biosynthesis and signaling in soybean drought stress tolerance

Fabricio Arraes (3580706)
Magda Beneventi (3580694)
Maria Lisei de Sa (3580700)
Joaquin Paixao (3580697)
Erika Albuquerque (3580688)
Silvana Marin (3580691)
Eduardo Purgatto (1948921)
Alexandre Nepomuceno (514830)
Maria Grossi-de-Sa (3580703)

September 2015

Real Time PCR (RT-qPCR) Primers (Method S1). Gene summary and primers for Real Time PCR. (PDF 227Â k...

Additional file 4: of Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance

Chenglin Chai (45748)
Yongqin Wang (515167)
Trupti Joshi (51047)
Babu Valliyodan (131241)
Silvas Prince (3462488)
Lydia Michel (3543893)
Dong Xu (1234428)
Henry Nguyen (493314)

August 2015

Tissue/organ expression pattern of TF genes. The expression of soybean TF-ORFeome candidates in seve...

Additional file 1: Table S1. of A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Prateek Tripathi (759017)
Roel Rabara (3547952)
R. Reese (3547946)
Marissa Miller (3547949)
Jai Rohila (3547967)
Senthil Subramanian (3547955)
Qingxi Shen (3547970)
Dominique Morandi (3547958)
Heike BĂźcking (3547961)
Vladimir Shulaev (461443)
Paul Rushton (3547964)

February 2016

Heat maps and box plots of all detectable metabolites of known identity. (XLSX 1476Â kb

Additional file 18: Table S14. of A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Prateek Tripathi (759017)
Roel Rabara (3547952)
R. Reese (3547946)
Marissa Miller (3547949)
Jai Rohila (3547967)
Senthil Subramanian (3547955)
Qingxi Shen (3547970)
Dominique Morandi (3547958)
Heike BĂźcking (3547961)
Vladimir Shulaev (461443)
Paul Rushton (3547964)

February 2016

Differentially accumulated proteins during dehydration in soybean roots. (XLSX 23Â kb

Additional file 15: Figure S4. of A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Prateek Tripathi (759017)
Roel Rabara (3547952)
R. Reese (3547946)
Marissa Miller (3547949)
Jai Rohila (3547967)
Senthil Subramanian (3547955)
Qingxi Shen (3547970)
Dominique Morandi (3547958)
Heike BĂźcking (3547961)
Vladimir Shulaev (461443)
Paul Rushton (3547964)

February 2016

Phylogenetic analyses of the bHLH transcription factor family from soybean. (PDF 71Â kb

Additional file 17: Table S13. of A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Prateek Tripathi (759017)
Roel Rabara (3547952)
R. Reese (3547946)
Marissa Miller (3547949)
Jai Rohila (3547967)
Senthil Subramanian (3547955)
Qingxi Shen (3547970)
Dominique Morandi (3547958)
Heike BĂźcking (3547961)
Vladimir Shulaev (461443)
Paul Rushton (3547964)

February 2016

qRT-PCR verification of expression patterns of 14 genes from the oligo array analysis. (PDF 1550Â kb

A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Tripathi, Prateek
Rabara, Roel C.
Reese, R. Neil
Miller, Marissa A.
Rohila, Jai S.
Subramanian, Senthil
Shen, Qingxi J.
Morandi, Dominique
Bücking, Heike
Shulaev, Vladimir
Rushton, Paul J.

February 2016

This article identifies metabolites, proteins, and genes that are strongly up or down regulated duri...

A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Tripathi, Prateek
Rabara, Roel C.
Reese, R. Neil
Miller, Marissa A.
Rohila, Jai S.
Subramanian, Senthil
Shen, Qingxi J.
Morandi, Dominique
Bücking, Heike
Shulaev, Vladimir

January 2016

Background: The purpose of this project was to identify metabolites, proteins, genes, and promoters ...

A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Tripathi, Prateek
Rabara, Roel C.
Reese, R. Neil
Miller, Marissa A.
Rohila, Jai S.
Subramanian, Senthil
Shen, Qingxi J.
Morandi, Dominique
Bücking, Heike
Shulaev, Vladimir
Rushton, Paul J.

February 2016

This article identifies metabolites, proteins, and genes that are strongly up or down regulated duri...

Additional file 1:Supplementary Figures (Figs. S1-S10). of Implications of ethylene biosynthesis and signaling in soybean drought stress tolerance

Fabricio Arraes (3580706)
Magda Beneventi (3580694)
Maria Lisei de Sa (3580700)
Joaquin Paixao (3580697)
Erika Albuquerque (3580688)
Silvana Marin (3580691)
Eduardo Purgatto (1948921)
Alexandre Nepomuceno (514830)
Maria Grossi-de-Sa (3580703)

September 2015

Figure S1.Â Soybean Chromosomal Ideogram; Figure S2. Gene Ontology Classification; Figure S3. Prote...

Additional file 5: of Implications of ethylene biosynthesis and signaling in soybean drought stress tolerance

Fabricio Arraes (3580706)
Magda Beneventi (3580694)
Maria Lisei de Sa (3580700)
Joaquin Paixao (3580697)
Erika Albuquerque (3580688)
Silvana Marin (3580691)
Eduardo Purgatto (1948921)
Alexandre Nepomuceno (514830)
Maria Grossi-de-Sa (3580703)

September 2015

Real Time PCR (RT-qPCR) Cycle Threshold (C t ) (Tables S10-S11). Table S10. Target and endogenous ge...

Additional file 8: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

Man Zhang (466843)
Yanhui Liu (151413)
Hang Shi (120167)
Mingliang Guo (4877395)
Mengnan Chai (4877389)
Qing He (351975)
Maokai Yan (4877386)
Du Cao (4381888)
Lihua Zhao (566464)
Hanyang Cai (4877392)
Yuan Qin (260617)

February 2018

Table S6. The expression profiles (log2-based values) of the soybean bZIP genes after drought treatm...

Additional file 3: of Implications of ethylene biosynthesis and signaling in soybean drought stress tolerance

Fabricio Arraes (3580706)
Magda Beneventi (3580694)
Maria Lisei de Sa (3580700)
Joaquin Paixao (3580697)
Erika Albuquerque (3580688)
Silvana Marin (3580691)
Eduardo Purgatto (1948921)
Alexandre Nepomuceno (514830)
Maria Grossi-de-Sa (3580703)

September 2015

In silicoÂ Characterization of Ethylene Soybean Genes. Detailed description of characterization, gen...

Additional file 1: of Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance

Chenglin Chai (45748)
Yongqin Wang (515167)
Trupti Joshi (51047)
Babu Valliyodan (131241)
Silvas Prince (3462488)
Lydia Michel (3543893)
Dong Xu (1234428)
Henry Nguyen (493314)

August 2015

Fold change of expression of TF genes under water stress. The expressions (shown as fold change) of ...

Additional file 5: of Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance

Chenglin Chai (45748)
Yongqin Wang (515167)
Trupti Joshi (51047)
Babu Valliyodan (131241)
Silvas Prince (3462488)
Lydia Michel (3543893)
Dong Xu (1234428)
Henry Nguyen (493314)

August 2015

Integration of TF ORFeome information into Soykb. On the TF-ORFeome data page in SoyKB (A), clicking...

Additional file 6: of Implications of ethylene biosynthesis and signaling in soybean drought stress tolerance

Fabricio Arraes (3580706)
Magda Beneventi (3580694)
Maria Lisei de Sa (3580700)
Joaquin Paixao (3580697)
Erika Albuquerque (3580688)
Silvana Marin (3580691)
Eduardo Purgatto (1948921)
Alexandre Nepomuceno (514830)
Maria Grossi-de-Sa (3580703)

September 2015

Real Time PCR (RT-qPCR) Primers (Method S1). Gene summary and primers for Real Time PCR. (PDF 227Â k...

Additional file 4: of Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance

Chenglin Chai (45748)
Yongqin Wang (515167)
Trupti Joshi (51047)
Babu Valliyodan (131241)
Silvas Prince (3462488)
Lydia Michel (3543893)
Dong Xu (1234428)
Henry Nguyen (493314)

August 2015

Tissue/organ expression pattern of TF genes. The expression of soybean TF-ORFeome candidates in seve...

Additional file 1: Table S1. of A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Prateek Tripathi (759017)
Roel Rabara (3547952)
R. Reese (3547946)
Marissa Miller (3547949)
Jai Rohila (3547967)
Senthil Subramanian (3547955)
Qingxi Shen (3547970)
Dominique Morandi (3547958)
Heike BĂźcking (3547961)
Vladimir Shulaev (461443)
Paul Rushton (3547964)

February 2016

Heat maps and box plots of all detectable metabolites of known identity. (XLSX 1476Â kb

Additional file 18: Table S14. of A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Prateek Tripathi (759017)
Roel Rabara (3547952)
R. Reese (3547946)
Marissa Miller (3547949)
Jai Rohila (3547967)
Senthil Subramanian (3547955)
Qingxi Shen (3547970)
Dominique Morandi (3547958)
Heike BĂźcking (3547961)
Vladimir Shulaev (461443)
Paul Rushton (3547964)

February 2016

Differentially accumulated proteins during dehydration in soybean roots. (XLSX 23Â kb

Additional file 15: Figure S4. of A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Prateek Tripathi (759017)
Roel Rabara (3547952)
R. Reese (3547946)
Marissa Miller (3547949)
Jai Rohila (3547967)
Senthil Subramanian (3547955)
Qingxi Shen (3547970)
Dominique Morandi (3547958)
Heike BĂźcking (3547961)
Vladimir Shulaev (461443)
Paul Rushton (3547964)

February 2016

Phylogenetic analyses of the bHLH transcription factor family from soybean. (PDF 71Â kb

Additional file 17: Table S13. of A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Prateek Tripathi (759017)
Roel Rabara (3547952)
R. Reese (3547946)
Marissa Miller (3547949)
Jai Rohila (3547967)
Senthil Subramanian (3547955)
Qingxi Shen (3547970)
Dominique Morandi (3547958)
Heike BĂźcking (3547961)
Vladimir Shulaev (461443)
Paul Rushton (3547964)

February 2016

qRT-PCR verification of expression patterns of 14 genes from the oligo array analysis. (PDF 1550Â kb

A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Tripathi, Prateek
Rabara, Roel C.
Reese, R. Neil
Miller, Marissa A.
Rohila, Jai S.
Subramanian, Senthil
Shen, Qingxi J.
Morandi, Dominique
Bücking, Heike
Shulaev, Vladimir
Rushton, Paul J.

February 2016

This article identifies metabolites, proteins, and genes that are strongly up or down regulated duri...

A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Tripathi, Prateek
Rabara, Roel C.
Reese, R. Neil
Miller, Marissa A.
Rohila, Jai S.
Subramanian, Senthil
Shen, Qingxi J.
Morandi, Dominique
Bücking, Heike
Shulaev, Vladimir

January 2016

Background: The purpose of this project was to identify metabolites, proteins, genes, and promoters ...

A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Tripathi, Prateek
Rabara, Roel C.
Reese, R. Neil
Miller, Marissa A.
Rohila, Jai S.
Subramanian, Senthil
Shen, Qingxi J.
Morandi, Dominique
Bücking, Heike
Shulaev, Vladimir
Rushton, Paul J.

February 2016

This article identifies metabolites, proteins, and genes that are strongly up or down regulated duri...

Additional file 1:Supplementary Figures (Figs. S1-S10). of Implications of ethylene biosynthesis and signaling in soybean drought stress tolerance

Fabricio Arraes (3580706)
Magda Beneventi (3580694)
Maria Lisei de Sa (3580700)
Joaquin Paixao (3580697)
Erika Albuquerque (3580688)
Silvana Marin (3580691)
Eduardo Purgatto (1948921)
Alexandre Nepomuceno (514830)
Maria Grossi-de-Sa (3580703)

September 2015

Figure S1.Â Soybean Chromosomal Ideogram; Figure S2. Gene Ontology Classification; Figure S3. Prote...

Additional file 5: of Implications of ethylene biosynthesis and signaling in soybean drought stress tolerance

Fabricio Arraes (3580706)
Magda Beneventi (3580694)
Maria Lisei de Sa (3580700)
Joaquin Paixao (3580697)
Erika Albuquerque (3580688)
Silvana Marin (3580691)
Eduardo Purgatto (1948921)
Alexandre Nepomuceno (514830)
Maria Grossi-de-Sa (3580703)

September 2015

Real Time PCR (RT-qPCR) Cycle Threshold (C t ) (Tables S10-S11). Table S10. Target and endogenous ge...

Additional file 8: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

Man Zhang (466843)
Yanhui Liu (151413)
Hang Shi (120167)
Mingliang Guo (4877395)
Mengnan Chai (4877389)
Qing He (351975)
Maokai Yan (4877386)
Du Cao (4381888)
Lihua Zhao (566464)
Hanyang Cai (4877392)
Yuan Qin (260617)

February 2018

Table S6. The expression profiles (log2-based values) of the soybean bZIP genes after drought treatm...

Additional file 3: of Implications of ethylene biosynthesis and signaling in soybean drought stress tolerance

Fabricio Arraes (3580706)
Magda Beneventi (3580694)
Maria Lisei de Sa (3580700)
Joaquin Paixao (3580697)
Erika Albuquerque (3580688)
Silvana Marin (3580691)
Eduardo Purgatto (1948921)
Alexandre Nepomuceno (514830)
Maria Grossi-de-Sa (3580703)

September 2015

In silicoÂ Characterization of Ethylene Soybean Genes. Detailed description of characterization, gen...

Additional file 1: of Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance

Chenglin Chai (45748)
Yongqin Wang (515167)
Trupti Joshi (51047)
Babu Valliyodan (131241)
Silvas Prince (3462488)
Lydia Michel (3543893)
Dong Xu (1234428)
Henry Nguyen (493314)

August 2015

Fold change of expression of TF genes under water stress. The expressions (shown as fold change) of ...

Additional file 5: of Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance

Chenglin Chai (45748)
Yongqin Wang (515167)
Trupti Joshi (51047)
Babu Valliyodan (131241)
Silvas Prince (3462488)
Lydia Michel (3543893)
Dong Xu (1234428)
Henry Nguyen (493314)

August 2015

Integration of TF ORFeome information into Soykb. On the TF-ORFeome data page in SoyKB (A), clicking...

Additional file 6: of Implications of ethylene biosynthesis and signaling in soybean drought stress tolerance

Fabricio Arraes (3580706)
Magda Beneventi (3580694)
Maria Lisei de Sa (3580700)
Joaquin Paixao (3580697)
Erika Albuquerque (3580688)
Silvana Marin (3580691)
Eduardo Purgatto (1948921)
Alexandre Nepomuceno (514830)
Maria Grossi-de-Sa (3580703)

September 2015

Real Time PCR (RT-qPCR) Primers (Method S1). Gene summary and primers for Real Time PCR. (PDF 227Â k...

Additional file 4: of Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance

Chenglin Chai (45748)
Yongqin Wang (515167)
Trupti Joshi (51047)
Babu Valliyodan (131241)
Silvas Prince (3462488)
Lydia Michel (3543893)
Dong Xu (1234428)
Henry Nguyen (493314)

August 2015

Tissue/organ expression pattern of TF genes. The expression of soybean TF-ORFeome candidates in seve...

Additional file 7: Table S4. of A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Abstract

Extracted data

Additional file 7: Table S4. of A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes

Abstract

Extracted data

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