The location and SNP number for five susceptibility genes belonging to the network associated with leprosy. Table S2. The location and probe sets number for genes belonging to the subnetwork from PI3K-AKT signaling pathway and Notch signaling pathway. Table S3. Type I error rates of four methods (40 vertices and 54 edges in the network). Table S4. Type I error rates of four methods given the deviation from the normal distribution. Figure S1. A network including 40 vertices and 54 edges. Figure S2. The statistical power of the four methods under three scenarios. (a) only vertices change, (b) only edges change, (c) both vertices and edges change. (PDF 140 kb
Scatter plots of gene expression values between samples. A figure illustrating how similar of genes ...
List of 1655 genes with a negative jGRP statistic meaning a down-regulation in LUAD tissues relative...
Supplementary figures and tables. Figure S1: Comparison of thresholds to retrieve the number of comm...
The type I error rates of the seven methods without correlation and interaction under (β 1 = 0, β 2 ...
Information gain values for 1241 edges within the network at the percolation threshold. Shown here a...
Table S1. The sensitivity and specificity of GRIPT with CADD and other tests under the AR and AD mod...
Null distribution of heterophilicity values of KCTD15 from 1000 permuted networks. Null distribution...
Additional file 2. Figure S1. Estimated power for the seven SNP-set methods under the polygenic case...
Null distribution of heterophilicity values of SH2B1 from 1000 permuted networks. Null distribution ...
Figure S1. The directed acyclic subgraph of the human cell hierarchical taxonomy graph. Figure S2 Th...
Supplementary figure: a. Odds ratio for the distribution of transcription factor HGMD missense mutat...
Results of randomization and statistical tests for top 10 schizophrenia miRNAs. Columns from the lef...
Mutual information values for 58 SNPs within the network at the percolation threshold. Shown here ar...
Comparison between groups of NFD and non-NFD genes in random networks with respect to the proportion...
Figure S1. Test of the Poisson distribution of nonsense mutations in URA3. Figure S2. The effect of ...
Scatter plots of gene expression values between samples. A figure illustrating how similar of genes ...
List of 1655 genes with a negative jGRP statistic meaning a down-regulation in LUAD tissues relative...
Supplementary figures and tables. Figure S1: Comparison of thresholds to retrieve the number of comm...
The type I error rates of the seven methods without correlation and interaction under (β 1 = 0, β 2 ...
Information gain values for 1241 edges within the network at the percolation threshold. Shown here a...
Table S1. The sensitivity and specificity of GRIPT with CADD and other tests under the AR and AD mod...
Null distribution of heterophilicity values of KCTD15 from 1000 permuted networks. Null distribution...
Additional file 2. Figure S1. Estimated power for the seven SNP-set methods under the polygenic case...
Null distribution of heterophilicity values of SH2B1 from 1000 permuted networks. Null distribution ...
Figure S1. The directed acyclic subgraph of the human cell hierarchical taxonomy graph. Figure S2 Th...
Supplementary figure: a. Odds ratio for the distribution of transcription factor HGMD missense mutat...
Results of randomization and statistical tests for top 10 schizophrenia miRNAs. Columns from the lef...
Mutual information values for 58 SNPs within the network at the percolation threshold. Shown here ar...
Comparison between groups of NFD and non-NFD genes in random networks with respect to the proportion...
Figure S1. Test of the Poisson distribution of nonsense mutations in URA3. Figure S2. The effect of ...
Scatter plots of gene expression values between samples. A figure illustrating how similar of genes ...
List of 1655 genes with a negative jGRP statistic meaning a down-regulation in LUAD tissues relative...
Supplementary figures and tables. Figure S1: Comparison of thresholds to retrieve the number of comm...