Additional file 5: Table S1. of Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing

Additional file 1: of Genomic introgression through interspecific hybridization counteracts genetic bottleneck during soybean domestication

Xutong Wang (5929328)
Liyang Chen (6279566)
Jianxin Ma (430457)

January 2019

Table S1. Identities, codes, introgression rates, and genotypes of the accessions used in this study...

Additional file 4: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S4. General linear model association of polymorphic sites of soybean FT family genes with rela...

Additional file 6: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S6. Flowering time (Ve-R1) and growth duration (Ve-R7 and Ve-R8) data in Beijing, China, in 20...

Additional file 9: Table S5. of Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing

João Maldonado dos Santos (3546500)
Babu Valliyodan (131241)
Trupti Joshi (51047)
Saad Khan (296295)
Yang Liu (4829)
Juexin Wang (213596)
Tri Vuong (3397577)
Marcelo Oliveira (3546488)
Francismar Marcelino-Guimarães (3546503)
Dong Xu (1234428)
Henry Nguyen (493314)
Ricardo Abdelnoor (3546497)

February 2016

Summary of the most relevant results from the Gene Ontology (GO) enrichment analysis. (DOCX 117 kb

Additional file 3: Figure S3. of Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing

João Maldonado dos Santos (3546500)
Babu Valliyodan (131241)
Trupti Joshi (51047)
Saad Khan (296295)
Yang Liu (4829)
Juexin Wang (213596)
Tri Vuong (3397577)
Marcelo Oliveira (3546488)
Francismar Marcelino-Guimarães (3546503)
Dong Xu (1234428)
Henry Nguyen (493314)
Ricardo Abdelnoor (3546497)

February 2016

Copy number variation for each Brazilian soybean line used in this study. (PNG 144 kb

Additional file 8: Table S4. of Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing

João Maldonado dos Santos (3546500)
Babu Valliyodan (131241)
Trupti Joshi (51047)
Saad Khan (296295)
Yang Liu (4829)
Juexin Wang (213596)
Tri Vuong (3397577)
Marcelo Oliveira (3546488)
Francismar Marcelino-Guimarães (3546503)
Dong Xu (1234428)
Henry Nguyen (493314)
Ricardo Abdelnoor (3546497)

February 2016

Number of SNPs associated to important regions on Brazilian soybean cultivars. All: SNP present in a...

Additional file 5: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S5. Polymorphic sites of the 10 soybean FT family genes from the present study. (DOCX 56 kb

Additional file 2: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S2. Sequence of primers for the 10 FT family genes in soybean. (DOCX 15 kb

Additional file 5: of Genomic consequences of selection and genome-wide association mapping in soybean

Zixiang Wen (3159711)
John Boyse (3436280)
Qijian Song (277210)
Perry Cregan (741207)
Dechun Wang (3159705)

September 2015

The frequency distribution of variation of 9 traits in tested soybean accessions. (DOCX 87 kb

Additional file 1: Table S1. of The development and use of a molecular model for soybean maturity groups

Tiffany Langewisch (551047)
Julian Lenis (4055656)
Guo-Liang Jiang (715827)
Dechun Wang (3159705)
Vince Pantalone (3406655)
Kristin Bilyeu (551052)

May 2017

E genotypes of major maturity genes of landraces. Table S2. E genotypes of major maturity genes of C...

Additional file 5: of Genome-wide association study of four yield-related traits at the R6 stage in soybean

Xiangnan Li (3459992)
Xiaoli Zhang (135098)
Longming Zhu (5882234)
Yuanpeng Bu (5023004)
Xinfang Wang (747604)
Xing Zhang (11943)
Yang Zhou (65942)
Xiaoting Wang (206653)
Na Guo (198794)
Lijuan Qiu (651900)
Jinming Zhao (349674)
Han Xing (227847)

March 2019

Table S5. SNPs significantly associated with the four yield-related traits. (XLSX 22 kb

Additional file 9: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S9. Polymorphic site features used for defining the haplotypes of the 10 soybean FT family gen...

Additional file 8: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S8. Polymorphic sites used for defining the haplotypes of the 10 soybean FT family genes. (DOC...

Additional file 4: of Genome-wide association study of four yield-related traits at the R6 stage in soybean

Xiangnan Li (3459992)
Xiaoli Zhang (135098)
Longming Zhu (5882234)
Yuanpeng Bu (5023004)
Xinfang Wang (747604)
Xing Zhang (11943)
Yang Zhou (65942)
Xiaoting Wang (206653)
Na Guo (198794)
Lijuan Qiu (651900)
Jinming Zhao (349674)
Han Xing (227847)

March 2019

Table S4. The ecological distribution of 133 soybean landraces from different subgroups. (XLSX 9 kb

Additional file 10: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S10. Different types of soybean FT proteins and their haplotype distribution. (DOCX 18 kb

Additional file 1: of Genomic introgression through interspecific hybridization counteracts genetic bottleneck during soybean domestication

Xutong Wang (5929328)
Liyang Chen (6279566)
Jianxin Ma (430457)

January 2019

Table S1. Identities, codes, introgression rates, and genotypes of the accessions used in this study...

Additional file 4: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S4. General linear model association of polymorphic sites of soybean FT family genes with rela...

Additional file 6: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S6. Flowering time (Ve-R1) and growth duration (Ve-R7 and Ve-R8) data in Beijing, China, in 20...

Additional file 9: Table S5. of Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing

João Maldonado dos Santos (3546500)
Babu Valliyodan (131241)
Trupti Joshi (51047)
Saad Khan (296295)
Yang Liu (4829)
Juexin Wang (213596)
Tri Vuong (3397577)
Marcelo Oliveira (3546488)
Francismar Marcelino-Guimarães (3546503)
Dong Xu (1234428)
Henry Nguyen (493314)
Ricardo Abdelnoor (3546497)

February 2016

Summary of the most relevant results from the Gene Ontology (GO) enrichment analysis. (DOCX 117 kb

Additional file 3: Figure S3. of Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing

João Maldonado dos Santos (3546500)
Babu Valliyodan (131241)
Trupti Joshi (51047)
Saad Khan (296295)
Yang Liu (4829)
Juexin Wang (213596)
Tri Vuong (3397577)
Marcelo Oliveira (3546488)
Francismar Marcelino-Guimarães (3546503)
Dong Xu (1234428)
Henry Nguyen (493314)
Ricardo Abdelnoor (3546497)

February 2016

Copy number variation for each Brazilian soybean line used in this study. (PNG 144 kb

Additional file 8: Table S4. of Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing

João Maldonado dos Santos (3546500)
Babu Valliyodan (131241)
Trupti Joshi (51047)
Saad Khan (296295)
Yang Liu (4829)
Juexin Wang (213596)
Tri Vuong (3397577)
Marcelo Oliveira (3546488)
Francismar Marcelino-Guimarães (3546503)
Dong Xu (1234428)
Henry Nguyen (493314)
Ricardo Abdelnoor (3546497)

February 2016

Number of SNPs associated to important regions on Brazilian soybean cultivars. All: SNP present in a...

Additional file 5: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S5. Polymorphic sites of the 10 soybean FT family genes from the present study. (DOCX 56 kb

Additional file 2: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S2. Sequence of primers for the 10 FT family genes in soybean. (DOCX 15 kb

Additional file 5: of Genomic consequences of selection and genome-wide association mapping in soybean

Zixiang Wen (3159711)
John Boyse (3436280)
Qijian Song (277210)
Perry Cregan (741207)
Dechun Wang (3159705)

September 2015

The frequency distribution of variation of 9 traits in tested soybean accessions. (DOCX 87 kb

Additional file 1: Table S1. of The development and use of a molecular model for soybean maturity groups

Tiffany Langewisch (551047)
Julian Lenis (4055656)
Guo-Liang Jiang (715827)
Dechun Wang (3159705)
Vince Pantalone (3406655)
Kristin Bilyeu (551052)

May 2017

E genotypes of major maturity genes of landraces. Table S2. E genotypes of major maturity genes of C...

Additional file 5: of Genome-wide association study of four yield-related traits at the R6 stage in soybean

Xiangnan Li (3459992)
Xiaoli Zhang (135098)
Longming Zhu (5882234)
Yuanpeng Bu (5023004)
Xinfang Wang (747604)
Xing Zhang (11943)
Yang Zhou (65942)
Xiaoting Wang (206653)
Na Guo (198794)
Lijuan Qiu (651900)
Jinming Zhao (349674)
Han Xing (227847)

March 2019

Table S5. SNPs significantly associated with the four yield-related traits. (XLSX 22 kb

Additional file 9: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S9. Polymorphic site features used for defining the haplotypes of the 10 soybean FT family gen...

Additional file 8: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S8. Polymorphic sites used for defining the haplotypes of the 10 soybean FT family genes. (DOC...

Additional file 4: of Genome-wide association study of four yield-related traits at the R6 stage in soybean

Xiangnan Li (3459992)
Xiaoli Zhang (135098)
Longming Zhu (5882234)
Yuanpeng Bu (5023004)
Xinfang Wang (747604)
Xing Zhang (11943)
Yang Zhou (65942)
Xiaoting Wang (206653)
Na Guo (198794)
Lijuan Qiu (651900)
Jinming Zhao (349674)
Han Xing (227847)

March 2019

Table S4. The ecological distribution of 133 soybean landraces from different subgroups. (XLSX 9 kb

Additional file 10: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S10. Different types of soybean FT proteins and their haplotype distribution. (DOCX 18 kb

Additional file 1: of Genomic introgression through interspecific hybridization counteracts genetic bottleneck during soybean domestication

Xutong Wang (5929328)
Liyang Chen (6279566)
Jianxin Ma (430457)

January 2019

Table S1. Identities, codes, introgression rates, and genotypes of the accessions used in this study...

Additional file 4: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S4. General linear model association of polymorphic sites of soybean FT family genes with rela...

Additional file 6: of Natural variations of FT family genes in soybean varieties covering a wide range of maturity groups

Bingjun Jiang (82454)
Shouwei Zhang (1554022)
Wenwen Song (232286)
Mohammad Khan (365560)
Shi Sun (470303)
Chengsheng Zhang (203519)
Tingting Wu (228837)
Cunxiang Wu (82962)
Tianfu Han (82963)

March 2019

Table S6. Flowering time (Ve-R1) and growth duration (Ve-R7 and Ve-R8) data in Beijing, China, in 20...

Additional file 5: Table S1. of Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing

Abstract

Extracted data

Additional file 5: Table S1. of Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing

Abstract

Extracted data

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