mRNA expression of histone deacetylases in the 2D12 cell line. HDAC1, HDAC2, HDAC3, and HDAC8 relative mRNA levels in the non-stimulated 2D12 cells and 2D12 cells stimulated for 24 h with TNF-α and PMA were determined by qRT-PCR. mRNA expression was normalized to the expression of RNA polymerase II, polypeptide A (POLR2A) housekeeping gene. Data are presented as a mean ± SD of triplicates. The p values were calculated by the non-paired Student’s t test. Significance was assigned as follows: ** for p values <0.01, *** for p values <0.001. (TIF 63 kb
Box plot representation of DNA methylation alterations of analysed genes in biopsies and macrodissec...
(A) Surface DC and MAC markers analysed by flow cytometry during DC and MAC differentiation in the p...
Functional annotation of 38 decreased (A) and 41 increased (B) genes in chromosomes 16, 17, 19, and ...
High levels of DNA methylation of proviral 5’ LTR remain stable after repeated cellular stimulation ...
5’ LTR CpG methylation of the HIV-1 provirus in the latent reservoir of infected patients who were t...
Chromosomal distribution of H3K4me3 binding sites in HIV-1 latently infected cells. Enrichment patte...
Chromosomal distribution of H3K9ac binding sites in HIV-1 latently infected cells. Enrichment patter...
(A) DNA methylation dynamics of selected loci during MO-to-DC and MO-to-MAC differentiation and matu...
Chromosomal distribution of H3K9ac binding sites in HIV-1 latently infected cells. Enrichment patter...
Figure S1. Venn diagram of the differentially expressed genes (DEGs) identified from each individual...
Correlation of methylation level at different gene features with transcript and protein expression l...
Figure S1. Knockdown of DOT1L leads to decreased H3K79 methylation. a SW837 cells were transfected w...
Additional file 2: Figure S1. dCA inhibits HIV expression in HIV chronically infected HeLa-CD4 cells...
Lists of 38 decreased genes and 41 increased genes identified in the co-occurrence of two histone mo...
Table S1A. All the significantly down-regulated genes in the LC group. B. All the significantly up-r...
Box plot representation of DNA methylation alterations of analysed genes in biopsies and macrodissec...
(A) Surface DC and MAC markers analysed by flow cytometry during DC and MAC differentiation in the p...
Functional annotation of 38 decreased (A) and 41 increased (B) genes in chromosomes 16, 17, 19, and ...
High levels of DNA methylation of proviral 5’ LTR remain stable after repeated cellular stimulation ...
5’ LTR CpG methylation of the HIV-1 provirus in the latent reservoir of infected patients who were t...
Chromosomal distribution of H3K4me3 binding sites in HIV-1 latently infected cells. Enrichment patte...
Chromosomal distribution of H3K9ac binding sites in HIV-1 latently infected cells. Enrichment patter...
(A) DNA methylation dynamics of selected loci during MO-to-DC and MO-to-MAC differentiation and matu...
Chromosomal distribution of H3K9ac binding sites in HIV-1 latently infected cells. Enrichment patter...
Figure S1. Venn diagram of the differentially expressed genes (DEGs) identified from each individual...
Correlation of methylation level at different gene features with transcript and protein expression l...
Figure S1. Knockdown of DOT1L leads to decreased H3K79 methylation. a SW837 cells were transfected w...
Additional file 2: Figure S1. dCA inhibits HIV expression in HIV chronically infected HeLa-CD4 cells...
Lists of 38 decreased genes and 41 increased genes identified in the co-occurrence of two histone mo...
Table S1A. All the significantly down-regulated genes in the LC group. B. All the significantly up-r...
Box plot representation of DNA methylation alterations of analysed genes in biopsies and macrodissec...
(A) Surface DC and MAC markers analysed by flow cytometry during DC and MAC differentiation in the p...
Functional annotation of 38 decreased (A) and 41 increased (B) genes in chromosomes 16, 17, 19, and ...