<p>(A) Species-level clusters at a dDDH threshold of 70% and (B) group-level clusters at 31.8% dDDH threshold. The phylogenomic tree from <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0150183#pone.0150183.g003" target="_blank">Fig 3B</a> was used for ordering strains in the symmetric matrix. Black boxes on the heatmap matrix represent species or group clusters according to the OPTSIL results.</p
The scale bar represents color corresponded to pairwise dN/dS ratios. The cladogram above the heatma...
<p>The data collected refer to 3 independent biological replicates, each consisting of a pool of 15 ...
The scale bar showed the color corresponded to dN/dS ratios. The cladogram above the heatmap corresp...
<p>Dendritic heat map representing the fifth mutation step of the simulated mutation lineage data ge...
<p>Heatmap represents the number of shared orthologs between strains, the tree was inferred by compl...
<p>Dendritic heat maps representing 0 through 15 mutations of the simulated mutation lineage data ge...
<p>Hierarchical clustering obtained using Pearson's correlation considering the set of 2,900 differe...
<p>Both heat-plots of the similarity matrices and trees created from the same data are shown. <b>A</...
<p>MG-RAST heatmaps representing the phylogenetic diversity of the four samples at the phylum (left)...
<p>Dendritic heat maps representing generations 0 through 15 of the simulated population growth data...
<p>Each square represents the Spearman’s correlation coefficient between the frequencies of the phyl...
<p>(<b>A</b>) A heat map depicting the genomic relationship between DGRP lines. Genome size is order...
<p>SCB34 and RS218 are highlighted by the arrows, among 33 additional representative <i>E</i>. <i>co...
<p>A, B, C, and D: the GSE38611, GSE2466, GSE9992 and GSE46261 cohorts, respectively. Cluster member...
<p>(A) total microbiota, (B) active microbiota. Colors in the figure depict the percentage range of ...
The scale bar represents color corresponded to pairwise dN/dS ratios. The cladogram above the heatma...
<p>The data collected refer to 3 independent biological replicates, each consisting of a pool of 15 ...
The scale bar showed the color corresponded to dN/dS ratios. The cladogram above the heatmap corresp...
<p>Dendritic heat map representing the fifth mutation step of the simulated mutation lineage data ge...
<p>Heatmap represents the number of shared orthologs between strains, the tree was inferred by compl...
<p>Dendritic heat maps representing 0 through 15 mutations of the simulated mutation lineage data ge...
<p>Hierarchical clustering obtained using Pearson's correlation considering the set of 2,900 differe...
<p>Both heat-plots of the similarity matrices and trees created from the same data are shown. <b>A</...
<p>MG-RAST heatmaps representing the phylogenetic diversity of the four samples at the phylum (left)...
<p>Dendritic heat maps representing generations 0 through 15 of the simulated population growth data...
<p>Each square represents the Spearman’s correlation coefficient between the frequencies of the phyl...
<p>(<b>A</b>) A heat map depicting the genomic relationship between DGRP lines. Genome size is order...
<p>SCB34 and RS218 are highlighted by the arrows, among 33 additional representative <i>E</i>. <i>co...
<p>A, B, C, and D: the GSE38611, GSE2466, GSE9992 and GSE46261 cohorts, respectively. Cluster member...
<p>(A) total microbiota, (B) active microbiota. Colors in the figure depict the percentage range of ...
The scale bar represents color corresponded to pairwise dN/dS ratios. The cladogram above the heatma...
<p>The data collected refer to 3 independent biological replicates, each consisting of a pool of 15 ...
The scale bar showed the color corresponded to dN/dS ratios. The cladogram above the heatmap corresp...