Sample information and sequencing statistics. Table S2. Results of chromosomal D-statistics. Table S3. D-statistics and f d -statistics for all the predicted candidate introgression loci. Table S4. Results of chromosomal dxy. Table S5. Results of dxy for all the candidate introgression loci. Table S6. Read depth analyses for all the predicted candidate introgression loci among four focal species. Table S7. Results of D-statistics to examine gene flow between other species and H. m. nanna. Table S8. Gene annotations of 41 candidate introgression loci. Table S9. Autosome versus Z chromosome population genetic statistics. (DOCX 123 kb
Table S1. Primer sequences (Forward and Reverse) for each gene and species. Table S2. Descriptive pa...
List of candidate genes for the European population and the values of the significant statistics obs...
Comparative analyses of the Lepidoptera genomes, related to Figs. 2 and 4. (XLSX 113 kb
A maximum-likelihood phylogeny of 32 samples combined with dating of the nodes. Divergence times wer...
Absolute genomic divergence across the red color pattern (D) interval and unlinked loci. Sliding win...
Decay of divergence with recombination distance. The curves represent the decay of genomic divergenc...
Phenotyping data for MN and ND individuals. Table containing the wing and development time measureme...
List of exemplar mycalesines taxa included in the study and the gene regions amplified and sequenced...
Phylogenetic network at loci unlinked to color pattern. Neighbor-net splits tree network at loci unl...
Primers used in the AFLP protocol. Table S2 Error rates of the loci obtained by each primer combinat...
Quality and composition of Lepidoptera genomes, related to Table 1. (XLSX 53 kb
kdr L1014 codon region DNA based population differentiation for population pairs (estimates of F ST ...
Table S1. Primer names, sequences used in PCR reactions of genes sequenced. Table S2. List of groupi...
Table S1. D. pseudoobscura species group lines used in this study. Table S2. TEs found in D. obscura...
Table presenting detailed information of the AHE matrix composition, including locus information, ca...
Table S1. Primer sequences (Forward and Reverse) for each gene and species. Table S2. Descriptive pa...
List of candidate genes for the European population and the values of the significant statistics obs...
Comparative analyses of the Lepidoptera genomes, related to Figs. 2 and 4. (XLSX 113 kb
A maximum-likelihood phylogeny of 32 samples combined with dating of the nodes. Divergence times wer...
Absolute genomic divergence across the red color pattern (D) interval and unlinked loci. Sliding win...
Decay of divergence with recombination distance. The curves represent the decay of genomic divergenc...
Phenotyping data for MN and ND individuals. Table containing the wing and development time measureme...
List of exemplar mycalesines taxa included in the study and the gene regions amplified and sequenced...
Phylogenetic network at loci unlinked to color pattern. Neighbor-net splits tree network at loci unl...
Primers used in the AFLP protocol. Table S2 Error rates of the loci obtained by each primer combinat...
Quality and composition of Lepidoptera genomes, related to Table 1. (XLSX 53 kb
kdr L1014 codon region DNA based population differentiation for population pairs (estimates of F ST ...
Table S1. Primer names, sequences used in PCR reactions of genes sequenced. Table S2. List of groupi...
Table S1. D. pseudoobscura species group lines used in this study. Table S2. TEs found in D. obscura...
Table presenting detailed information of the AHE matrix composition, including locus information, ca...
Table S1. Primer sequences (Forward and Reverse) for each gene and species. Table S2. Descriptive pa...
List of candidate genes for the European population and the values of the significant statistics obs...
Comparative analyses of the Lepidoptera genomes, related to Figs. 2 and 4. (XLSX 113 kb