Additional file 9: Table S7. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Additional file 4: of Phenotypic and genetic characterization of tomato mutants provides new insights into leaf development and its relationship to agronomic traits

Marybel Jáquez-Gutiérrez (6590693)
Alejandro Atarés (234316)
Benito Pineda (234303)
Pilar Angarita (6590696)
Carlos Ribelles (6590699)
Begoña García-Sogo (234324)
Jorge Sánchez-López (6590702)
Carmen Capel (4227619)
Fernando Yuste-Lisbona (6590705)
Rafael Lozano (234333)
Vicente Moreno (234329)

April 2019

Table S2. Number of T-DNA inserts with a functional nptII marker gene in tomato mutants altered in l...

Additional file 9: Table S4. of Genome-wide analysis of tomato NF-Y factors and their role in fruit ripening

Shan Li (110392)
Ka Li (399537)
Zheng Ju (3587018)
Dongyan Cao (707201)
Daqi Fu (452767)
Hongliang Zhu (815482)
Benzhong Zhu (452766)
Yunbo Luo (187631)

January 2016

Primers for plasmid construction used in subcellular localization assays. (PDF 79 kb

Additional file 1: of Mosaic mitochondrial-plastid insertions into the nuclear genome show evidence of both non-homologous end joining and homologous recombination

Shir Portugez (5927207)
William Martin (2830)
Einat Hazkani-Covo (269900)

November 2018

Table S1. Organelle insertions identified in nine plant species. Table contains information about th...

Additional file 10: Table S8. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

Comparison of NF10547 high confidence Tnt1 insertion loci identified from WGS vs TAIL-PCR. (XLS 33Â ...

Additional file 7: Table S5. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

List of high confidence Tnt1 insertion loci and its supporting reads/nodes identified from NF10547 b...

Additional file 8: Table S6. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

List of low confidence Tnt1 insertion loci and its supporting reads/nodes identified from NF10547 by...

Additional file 5: Table S3. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

List of high confidence Tnt1 insertion loci and its supporting reads/nodes identified from NF11217 b...

Additional file 2: Table S1. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

Chromosomal locations of NF11217 TAIL-PCR FSTs recovered from R0, R1 and BC1F2 generations. (XLS 53Â...

Additional file 1: of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

List of sequences of all NF11217 flanking sequence tags (FSTs) obtained from R0, R1 and BC1 F2 gener...

Additional file 14: Figure S2. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

Comparison of Mtnin-16â˛s encoded sequence with that of Lotus japonicus NIN and M. truncatula NIN. ...

Identifying Tnt1 transposon insertions in the NPF1B gene of Medicago truncatula through PCR screening

Bardsley, Katherine Anne

March 2019

The NPF1B gene is retained in many species that are able to perform root symbioses, mycorrhizae and ...

Additional file 4: Table S4. of Pre-announcement of symbiotic guests: transcriptional reprogramming by mycorrhizal lipochitooligosaccharides shows a strict co-dependency on the GRAS transcription factors NSP1 and RAM1

Natalija Hohnjec (3450776)
Lisa Czaja-Hasse (3450782)
Claudia Hogekamp (3450779)
Helge Küster (416276)

November 2015

Ten subsets from Additional file 3: Table S3, where genes activated at least 1.5-fold (p < 0.05) in ...

Additional file 1: Table S1. of The anaerobic linalool metabolism in Thauera linaloolentis 47 Lol

Robert Marmulla (3479282)
Edinson Cala (3479279)
Stephanie Markert (124599)
Thomas Schweder (124606)
Jens Harder (3479285)

April 2016

Transposon insertion mutants. The table presents the transposon insertion mutants (name, NCBI access...

Genetic Analysis of Medicago Truncatula Plants with a Defective Mtire Gene

Alexis, Naudin

August 2015

Leguminous plants are able to fix nitrogen by establishing a symbiotic relationship with soil dwelli...

Additional file 1: Table S1. of Overexpression of MfPIP2-7 from Medicago falcata promotes cold tolerance and growth under NO3 − deficiency in transgenic tobacco plants

Chunliu Zhuo (3432683)
Ting Wang (16292)
Zhenfei Guo (3432686)
Shaoyun Lu (3432689)

June 2016

Primers for quantitative real-time PCR. Figure S1. Phylogenetic analysis of MfPIP2-7 in falcata with...

Additional file 4: of Phenotypic and genetic characterization of tomato mutants provides new insights into leaf development and its relationship to agronomic traits

Marybel Jáquez-Gutiérrez (6590693)
Alejandro Atarés (234316)
Benito Pineda (234303)
Pilar Angarita (6590696)
Carlos Ribelles (6590699)
Begoña García-Sogo (234324)
Jorge Sánchez-López (6590702)
Carmen Capel (4227619)
Fernando Yuste-Lisbona (6590705)
Rafael Lozano (234333)
Vicente Moreno (234329)

April 2019

Table S2. Number of T-DNA inserts with a functional nptII marker gene in tomato mutants altered in l...

Additional file 9: Table S4. of Genome-wide analysis of tomato NF-Y factors and their role in fruit ripening

Shan Li (110392)
Ka Li (399537)
Zheng Ju (3587018)
Dongyan Cao (707201)
Daqi Fu (452767)
Hongliang Zhu (815482)
Benzhong Zhu (452766)
Yunbo Luo (187631)

January 2016

Primers for plasmid construction used in subcellular localization assays. (PDF 79 kb

Additional file 1: of Mosaic mitochondrial-plastid insertions into the nuclear genome show evidence of both non-homologous end joining and homologous recombination

Shir Portugez (5927207)
William Martin (2830)
Einat Hazkani-Covo (269900)

November 2018

Table S1. Organelle insertions identified in nine plant species. Table contains information about th...

Additional file 10: Table S8. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

Comparison of NF10547 high confidence Tnt1 insertion loci identified from WGS vs TAIL-PCR. (XLS 33Â ...

Additional file 7: Table S5. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

List of high confidence Tnt1 insertion loci and its supporting reads/nodes identified from NF10547 b...

Additional file 8: Table S6. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

List of low confidence Tnt1 insertion loci and its supporting reads/nodes identified from NF10547 by...

Additional file 5: Table S3. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

List of high confidence Tnt1 insertion loci and its supporting reads/nodes identified from NF11217 b...

Additional file 2: Table S1. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

Chromosomal locations of NF11217 TAIL-PCR FSTs recovered from R0, R1 and BC1F2 generations. (XLS 53Â...

Additional file 1: of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

List of sequences of all NF11217 flanking sequence tags (FSTs) obtained from R0, R1 and BC1 F2 gener...

Additional file 14: Figure S2. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Vijaykumar Veerappan (1861978)
Mehul Jani (3415130)
Khem Kadel (3415115)
Taylor Troiani (3415121)
Ronny Gale (3415136)
Tyler Mayes (3415133)
Elena Shulaev (3415127)
Jiangqi Wen (612044)
Kirankumar Mysore (3415118)
Rajeev Azad (3415139)
Rebecca Dickstein (3415124)

February 2016

Comparison of Mtnin-16â˛s encoded sequence with that of Lotus japonicus NIN and M. truncatula NIN. ...

Identifying Tnt1 transposon insertions in the NPF1B gene of Medicago truncatula through PCR screening

Bardsley, Katherine Anne

March 2019

The NPF1B gene is retained in many species that are able to perform root symbioses, mycorrhizae and ...

Additional file 4: Table S4. of Pre-announcement of symbiotic guests: transcriptional reprogramming by mycorrhizal lipochitooligosaccharides shows a strict co-dependency on the GRAS transcription factors NSP1 and RAM1

Natalija Hohnjec (3450776)
Lisa Czaja-Hasse (3450782)
Claudia Hogekamp (3450779)
Helge Küster (416276)

November 2015

Ten subsets from Additional file 3: Table S3, where genes activated at least 1.5-fold (p < 0.05) in ...

Additional file 1: Table S1. of The anaerobic linalool metabolism in Thauera linaloolentis 47 Lol

Robert Marmulla (3479282)
Edinson Cala (3479279)
Stephanie Markert (124599)
Thomas Schweder (124606)
Jens Harder (3479285)

April 2016

Transposon insertion mutants. The table presents the transposon insertion mutants (name, NCBI access...

Genetic Analysis of Medicago Truncatula Plants with a Defective Mtire Gene

Alexis, Naudin

August 2015

Leguminous plants are able to fix nitrogen by establishing a symbiotic relationship with soil dwelli...

Additional file 1: Table S1. of Overexpression of MfPIP2-7 from Medicago falcata promotes cold tolerance and growth under NO3 − deficiency in transgenic tobacco plants

Chunliu Zhuo (3432683)
Ting Wang (16292)
Zhenfei Guo (3432686)
Shaoyun Lu (3432689)

June 2016

Primers for quantitative real-time PCR. Figure S1. Phylogenetic analysis of MfPIP2-7 in falcata with...

Additional file 4: of Phenotypic and genetic characterization of tomato mutants provides new insights into leaf development and its relationship to agronomic traits

Marybel Jáquez-Gutiérrez (6590693)
Alejandro Atarés (234316)
Benito Pineda (234303)
Pilar Angarita (6590696)
Carlos Ribelles (6590699)
Begoña García-Sogo (234324)
Jorge Sánchez-López (6590702)
Carmen Capel (4227619)
Fernando Yuste-Lisbona (6590705)
Rafael Lozano (234333)
Vicente Moreno (234329)

April 2019

Table S2. Number of T-DNA inserts with a functional nptII marker gene in tomato mutants altered in l...

Additional file 9: Table S4. of Genome-wide analysis of tomato NF-Y factors and their role in fruit ripening

Shan Li (110392)
Ka Li (399537)
Zheng Ju (3587018)
Dongyan Cao (707201)
Daqi Fu (452767)
Hongliang Zhu (815482)
Benzhong Zhu (452766)
Yunbo Luo (187631)

January 2016

Primers for plasmid construction used in subcellular localization assays. (PDF 79 kb

Additional file 1: of Mosaic mitochondrial-plastid insertions into the nuclear genome show evidence of both non-homologous end joining and homologous recombination

Shir Portugez (5927207)
William Martin (2830)
Einat Hazkani-Covo (269900)

November 2018

Table S1. Organelle insertions identified in nine plant species. Table contains information about th...

Additional file 9: Table S7. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Abstract

Extracted data

Topics

Additional file 9: Table S7. of Rapid identification of causative insertions underlying Medicago truncatula Tnt1 mutants defective in symbiotic nitrogen fixation from a forward genetic screen by whole genome sequencing

Abstract

Extracted data

Topics

Related items

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