<p>We aim to describe the immunogenicity of a peptide:HLA combination as a number between 0 and 1. For each subject, the outcome of the ELISpot assay is known, together with a list of their HLA alleles. The user can add prior knowledge in the form of a prior distribution. In the example, the prior knowledge describes the belief that HLA class II allele <i>A</i> is not immunogenetic in combination with the peptide, while HLA class-II allele <i>B</i> is. The output of the algorithm consists of posterior marginal distributions of the values <i>E</i><sub><i>j</i></sub>. In the example, it is found that allele <i>A</i> is more immunogenic that allele <i>B</i> in combination with the peptide.</p
Since CD8+ T cell response is crucial to combat intracellular infections and cancer, identification ...
BackgroundPrediction of T cell immunogenicity is a topic of considerable interest, both in terms of ...
Immunodominant T cell epitopes preferentially targeted in multiple individuals are the critical elem...
<p>(A) Correlation of experimental and predicted immunogenicity of each peptide. The experimental im...
ABSTRACT: This report describes an algorithm for identifying acceptable HLA antigens for highly allo...
<p>Accordingly, where possible, these algorithms were deployed to predict the binding of each recogn...
Methods applied in immunological bioinformatics A large variety of methods are commonly used in the ...
<p>The major histocompatibility complex of class II (MHCII) immunopeptidome represents the repertoir...
Promiscuous T-cell epitopes make ideal targets for vaccine development. We report here a computation...
Identification of promiscuous peptides, which bind to human leukocyte antigen, is indispensable for ...
Based on the success of cancer immunotherapy, personalized cancer vaccines have recently emerged as ...
The identification of major histocompatibility complex (MHC) class-II restricted peptides is an impo...
Motivation: T-cell epitopes serve as molecular keys to initiate adaptive immune responses. Identific...
Since CD8+ T cell response is crucial to combat intracellular infections and cancer, identification ...
Abstract. Human adaptive immune response relies on the recognition of short peptides through protein...
Since CD8+ T cell response is crucial to combat intracellular infections and cancer, identification ...
BackgroundPrediction of T cell immunogenicity is a topic of considerable interest, both in terms of ...
Immunodominant T cell epitopes preferentially targeted in multiple individuals are the critical elem...
<p>(A) Correlation of experimental and predicted immunogenicity of each peptide. The experimental im...
ABSTRACT: This report describes an algorithm for identifying acceptable HLA antigens for highly allo...
<p>Accordingly, where possible, these algorithms were deployed to predict the binding of each recogn...
Methods applied in immunological bioinformatics A large variety of methods are commonly used in the ...
<p>The major histocompatibility complex of class II (MHCII) immunopeptidome represents the repertoir...
Promiscuous T-cell epitopes make ideal targets for vaccine development. We report here a computation...
Identification of promiscuous peptides, which bind to human leukocyte antigen, is indispensable for ...
Based on the success of cancer immunotherapy, personalized cancer vaccines have recently emerged as ...
The identification of major histocompatibility complex (MHC) class-II restricted peptides is an impo...
Motivation: T-cell epitopes serve as molecular keys to initiate adaptive immune responses. Identific...
Since CD8+ T cell response is crucial to combat intracellular infections and cancer, identification ...
Abstract. Human adaptive immune response relies on the recognition of short peptides through protein...
Since CD8+ T cell response is crucial to combat intracellular infections and cancer, identification ...
BackgroundPrediction of T cell immunogenicity is a topic of considerable interest, both in terms of ...
Immunodominant T cell epitopes preferentially targeted in multiple individuals are the critical elem...