Additional file 3: of Quantitative trait loci analysis and genome-wide comparison for silique related traits in Brassica napus

Additional file 9: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S8. GO annotations of the 19 genes with frame-shift mutation InDels in the associated regions....

Additional file 5: Figure S3. of Mapping a major QTL responsible for dwarf architecture in Brassica napus using a single-nucleotide polymorphism marker approach

Yankun Wang (334944)
Wenjing Chen (383602)
Pu Chu (334947)
Shubei Wan (3531770)
Mao Yang (643298)
Mingming Wang (394106)
Rongzhan Guan (227840)

August 2016

Dot matrix of the BnDWF/DCL1 mapping interval of B. napus cv. ‘Darmor-bzh’ to B. napus cv. ‘ZS11’. (...

Additional file 3: Table S3. of An integrated analysis of QTL mapping and RNA sequencing provides further insights and promising candidates for pod number variation in rapeseed (Brassica napus L.)

Jiang Ye (3631216)
Yuhua Yang (1850752)
Bo Chen (1234734)
Jiaqin Shi (215142)
Meizhong Luo (18394)
Jiepeng Zhan (3631219)
Xinfa Wang (127764)
Guihua Liu (101769)
Hanzhong Wang (127769)

January 2017

List of QTLs identified in the our and other studies for pod number in rapeseed. (XLSX 21Â kb

Additional file 9: of Quantitative trait loci analysis and genome-wide comparison for silique related traits in Brassica napus

Xiaodong Wang (66801)
Li Chen (5749)
Aina Wang (185270)
Hao Wang (39217)
Jianhua Tian (215242)
Xiaoping Zhao (130328)
Hongbo Chao (3539594)
Yajun Zhao (491464)
Weiguo Zhao (187373)
Jun Xiang (494729)
Jianping Gan (3202890)
Maoteng Li (417063)

March 2016

Comparative mapping of homologous linkage groups between B. napus and B. rapa/B. oleracea. (DOCX 132...

Additional file 2: of Quantitative trait loci analysis and genome-wide comparison for silique related traits in Brassica napus

Xiaodong Wang (66801)
Li Chen (5749)
Aina Wang (185270)
Hao Wang (39217)
Jianhua Tian (215242)
Xiaoping Zhao (130328)
Hongbo Chao (3539594)
Yajun Zhao (491464)
Weiguo Zhao (187373)
Jun Xiang (494729)
Jianping Gan (3202890)
Maoteng Li (417063)

March 2016

Linear model comparison for different traits in three microenvironments. (DOCX 2412Â kb

Additional file 3: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S2. Information about the mapped reads based on the transcriptome sequencing data. (DOCX 15 kb

Additional file 12: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Figure S2. Stability of the multi-silique trait under one environment and variation of this trait ac...

Additional file 3: Table S3. of Synteny analysis of genes and distribution of loci controlling oil content and fatty acid profile based on QTL alignment map in Brassica napus

Nadia Raboanatahiry (4511053)
Hongbo Chao (3539594)
Liangxing Guo (4511050)
Jianping Gan (3202890)
Jun Xiang (494729)
Mingli Yan (4511047)
Libin Zhang (483030)
Longjiang Yu (422867)
Maoteng Li (417063)

October 2017

Overlapping QTLs for FA and OC in nine populations, mapped to B. napus âDarmor-bzhâ reference ge...

Additional file 8: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S7. GO annotations of the 104 genes with non-synonymous mutation SNPs in the associated region...

Additional file 4: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S3. Annotations of the 2041 genes in the two intersection associated regions. (XLSX 340 kb

Additional file 5: Table S5. of Synteny analysis of genes and distribution of loci controlling oil content and fatty acid profile based on QTL alignment map in Brassica napus

Nadia Raboanatahiry (4511053)
Hongbo Chao (3539594)
Liangxing Guo (4511050)
Jianping Gan (3202890)
Jun Xiang (494729)
Mingli Yan (4511047)
Libin Zhang (483030)
Longjiang Yu (422867)
Maoteng Li (417063)

October 2017

Comparison with Wang et al. (2015) study, showing same A. thaliana orthologous genes of detected can...

Additional file 10: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S9. KEGG enrichment of the 2041 genes in the intersection associated regions. (XLSX 12 kb

Additional file 7: of Unconditional and conditional QTL analyses of seed fatty acid composition in Brassica napus L.

Feng Chen (25347)
Wei Zhang (405)
Kunjiang Yu (4996664)
Lijie Sun (224007)
Jianqin Gao (4471147)
Xiaoying Zhou (119401)
Qi Peng (702503)
Sanxiong Fu (4996667)
Maolong Hu (621735)
Weihua Long (697682)
Huiming Pu (4471144)
Song Chen (69646)
Xiaodong Wang (66801)
Jiefu Zhang (4471138)

March 2018

The locations of conditional consensus QTLs associated with fatty acids in the AH map. Conditional c...

Additional file 5: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S4. GO enrichment in biological processes (BP) category of the genes. (XLSX 123 kb

Additional file 6: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S5. GO enrichment in cellular components (CC) category of the genes. (XLSX 26 kb

Additional file 9: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S8. GO annotations of the 19 genes with frame-shift mutation InDels in the associated regions....

Additional file 5: Figure S3. of Mapping a major QTL responsible for dwarf architecture in Brassica napus using a single-nucleotide polymorphism marker approach

Yankun Wang (334944)
Wenjing Chen (383602)
Pu Chu (334947)
Shubei Wan (3531770)
Mao Yang (643298)
Mingming Wang (394106)
Rongzhan Guan (227840)

August 2016

Dot matrix of the BnDWF/DCL1 mapping interval of B. napus cv. ‘Darmor-bzh’ to B. napus cv. ‘ZS11’. (...

Additional file 3: Table S3. of An integrated analysis of QTL mapping and RNA sequencing provides further insights and promising candidates for pod number variation in rapeseed (Brassica napus L.)

Jiang Ye (3631216)
Yuhua Yang (1850752)
Bo Chen (1234734)
Jiaqin Shi (215142)
Meizhong Luo (18394)
Jiepeng Zhan (3631219)
Xinfa Wang (127764)
Guihua Liu (101769)
Hanzhong Wang (127769)

January 2017

List of QTLs identified in the our and other studies for pod number in rapeseed. (XLSX 21Â kb

Additional file 9: of Quantitative trait loci analysis and genome-wide comparison for silique related traits in Brassica napus

Xiaodong Wang (66801)
Li Chen (5749)
Aina Wang (185270)
Hao Wang (39217)
Jianhua Tian (215242)
Xiaoping Zhao (130328)
Hongbo Chao (3539594)
Yajun Zhao (491464)
Weiguo Zhao (187373)
Jun Xiang (494729)
Jianping Gan (3202890)
Maoteng Li (417063)

March 2016

Comparative mapping of homologous linkage groups between B. napus and B. rapa/B. oleracea. (DOCX 132...

Additional file 2: of Quantitative trait loci analysis and genome-wide comparison for silique related traits in Brassica napus

Xiaodong Wang (66801)
Li Chen (5749)
Aina Wang (185270)
Hao Wang (39217)
Jianhua Tian (215242)
Xiaoping Zhao (130328)
Hongbo Chao (3539594)
Yajun Zhao (491464)
Weiguo Zhao (187373)
Jun Xiang (494729)
Jianping Gan (3202890)
Maoteng Li (417063)

March 2016

Linear model comparison for different traits in three microenvironments. (DOCX 2412Â kb

Additional file 3: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S2. Information about the mapped reads based on the transcriptome sequencing data. (DOCX 15 kb

Additional file 12: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Figure S2. Stability of the multi-silique trait under one environment and variation of this trait ac...

Additional file 3: Table S3. of Synteny analysis of genes and distribution of loci controlling oil content and fatty acid profile based on QTL alignment map in Brassica napus

Nadia Raboanatahiry (4511053)
Hongbo Chao (3539594)
Liangxing Guo (4511050)
Jianping Gan (3202890)
Jun Xiang (494729)
Mingli Yan (4511047)
Libin Zhang (483030)
Longjiang Yu (422867)
Maoteng Li (417063)

October 2017

Overlapping QTLs for FA and OC in nine populations, mapped to B. napus âDarmor-bzhâ reference ge...

Additional file 8: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S7. GO annotations of the 104 genes with non-synonymous mutation SNPs in the associated region...

Additional file 4: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S3. Annotations of the 2041 genes in the two intersection associated regions. (XLSX 340 kb

Additional file 5: Table S5. of Synteny analysis of genes and distribution of loci controlling oil content and fatty acid profile based on QTL alignment map in Brassica napus

Nadia Raboanatahiry (4511053)
Hongbo Chao (3539594)
Liangxing Guo (4511050)
Jianping Gan (3202890)
Jun Xiang (494729)
Mingli Yan (4511047)
Libin Zhang (483030)
Longjiang Yu (422867)
Maoteng Li (417063)

October 2017

Comparison with Wang et al. (2015) study, showing same A. thaliana orthologous genes of detected can...

Additional file 10: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S9. KEGG enrichment of the 2041 genes in the intersection associated regions. (XLSX 12 kb

Additional file 7: of Unconditional and conditional QTL analyses of seed fatty acid composition in Brassica napus L.

Feng Chen (25347)
Wei Zhang (405)
Kunjiang Yu (4996664)
Lijie Sun (224007)
Jianqin Gao (4471147)
Xiaoying Zhou (119401)
Qi Peng (702503)
Sanxiong Fu (4996667)
Maolong Hu (621735)
Weihua Long (697682)
Huiming Pu (4471144)
Song Chen (69646)
Xiaodong Wang (66801)
Jiefu Zhang (4471138)

March 2018

The locations of conditional consensus QTLs associated with fatty acids in the AH map. Conditional c...

Additional file 5: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S4. GO enrichment in biological processes (BP) category of the genes. (XLSX 123 kb

Additional file 6: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S5. GO enrichment in cellular components (CC) category of the genes. (XLSX 26 kb

Additional file 9: of Identification of genomic regions associated with multi-silique trait in Brassica napus

Liang Chai (6627410)
Jinfang Zhang (348213)
Kun Lu (404977)
Haojie Li (273528)
Lintao Wu (813896)
Hongshen Wan (6627413)
Benchuan Zheng (6627416)
Cheng Cui (289585)
Jun Jiang (149215)
Liangcai Jiang (6627419)

April 2019

Table S8. GO annotations of the 19 genes with frame-shift mutation InDels in the associated regions....

Additional file 5: Figure S3. of Mapping a major QTL responsible for dwarf architecture in Brassica napus using a single-nucleotide polymorphism marker approach

Yankun Wang (334944)
Wenjing Chen (383602)
Pu Chu (334947)
Shubei Wan (3531770)
Mao Yang (643298)
Mingming Wang (394106)
Rongzhan Guan (227840)

August 2016

Dot matrix of the BnDWF/DCL1 mapping interval of B. napus cv. ‘Darmor-bzh’ to B. napus cv. ‘ZS11’. (...

Additional file 3: Table S3. of An integrated analysis of QTL mapping and RNA sequencing provides further insights and promising candidates for pod number variation in rapeseed (Brassica napus L.)

Jiang Ye (3631216)
Yuhua Yang (1850752)
Bo Chen (1234734)
Jiaqin Shi (215142)
Meizhong Luo (18394)
Jiepeng Zhan (3631219)
Xinfa Wang (127764)
Guihua Liu (101769)
Hanzhong Wang (127769)

January 2017

List of QTLs identified in the our and other studies for pod number in rapeseed. (XLSX 21Â kb

Additional file 3: of Quantitative trait loci analysis and genome-wide comparison for silique related traits in Brassica napus

Abstract

Extracted data

Additional file 3: of Quantitative trait loci analysis and genome-wide comparison for silique related traits in Brassica napus

Abstract

Extracted data

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