Additional file 3: Table S2. of Fine mapping and RNA-Seq unravels candidate genes for a major QTL controlling multiple fiber quality traits at the T1 region in upland cotton

Table_1_Single-Locus and Multi-Locus Genome-Wide Association Studies in the Genetic Dissection of Fiber Quality Traits in Upland Cotton (Gossypium hirsutum L.).XLS

Chengqi Li (5640227)
Yuanzhi Fu (5640230)
Runrun Sun (5640233)
Yuanyuan Wang (20181)
Qinglian Wang (174003)

August 2018

A major breeding target in Upland cotton (Gossypium hirsutum L.) is to improve the fiber quality. To...

Additional file 12: Table S8. of Genome-wide SSR-based association mapping for fiber quality in nation-wide upland cotton inbreed cultivars in China

Xinhui Nie (820233)
Cong Huang (555049)
Chunyuan You (3519035)
Wu Li (283210)
Wenxia Zhao (730714)
Chao Shen (520343)
Beibei Zhang (509356)
Hantao Wang (760364)
Zhenhua Yan (760367)
Baoshen Dai (3519038)
Maojun Wang (439244)
Xianlong Zhang (211930)
Zhongxu Lin (277115)

May 2016

The results of the comparison of the allelic variation loci-related fiber quality and the Gossypium ...

Additional file 13: Table S9. of Genome-wide SSR-based association mapping for fiber quality in nation-wide upland cotton inbreed cultivars in China

Xinhui Nie (820233)
Cong Huang (555049)
Chunyuan You (3519035)
Wu Li (283210)
Wenxia Zhao (730714)
Chao Shen (520343)
Beibei Zhang (509356)
Hantao Wang (760364)
Zhenhua Yan (760367)
Baoshen Dai (3519038)
Maojun Wang (439244)
Xianlong Zhang (211930)
Zhongxu Lin (277115)

May 2016

The results of the comparison of the allelic variation loci-related fiber quality and the Gossypium ...

Additional file 5: Table S4. of Fine mapping and RNA-Seq unravels candidate genes for a major QTL controlling multiple fiber quality traits at the T1 region in upland cotton

Dexin Liu (138735)
Jian Zhang (1682)
Xueying Liu (344877)
Wenwen Wang (534041)
Dajun Liu (111263)
Zhonghua Teng (531125)
Xiaomei Fang (1662148)
Zhaoyun Tan (3487865)
Shiyi Tang (3487862)
Jinghong Yang (3487868)
Jianwei Zhong (329148)
Zhengsheng Zhang (3487871)

April 2016

Correlation coefficient among fiber quality traits in F2 population. (XLSX 10Â kb

Additional file 2: Figure S1. of Fine mapping and RNA-Seq unravels candidate genes for a major QTL controlling multiple fiber quality traits at the T1 region in upland cotton

Dexin Liu (138735)
Jian Zhang (1682)
Xueying Liu (344877)
Wenwen Wang (534041)
Dajun Liu (111263)
Zhonghua Teng (531125)
Xiaomei Fang (1662148)
Zhaoyun Tan (3487865)
Shiyi Tang (3487862)
Jinghong Yang (3487868)
Jianwei Zhong (329148)
Zhengsheng Zhang (3487871)

April 2016

The frequency distribution of five fiber quality traits in 1434-individual F2 population in 2011. (D...

Additional file 1: Table S1. of Identification of candidate genes for fiber length quantitative trait loci through RNA-Seq and linkage and physical mapping in cotton

Xihua Li (148840)
Man Wu (176916)
Guoyuan Liu (3860371)
Wenfeng Pei (843644)
Honghong Zhai (799135)
Jiwen Yu (534751)
Jinfa Zhang (121196)
Shuxun Yu (89036)

May 2017

Average fiber quality of the two BILs tested in different environments based on Yu et al. [37]. (DOC...

Additional file 7: of Genetic variation of dynamic fiber elongation and developmental quantitative trait locus mapping of fiber length in upland cotton (Gossypium hirsutum L.)

Jianjiang Ma (3807421)
Yanhui Geng (4530784)
Wenfeng Pei (843644)
Man Wu (176916)
Xingli Li (736261)
Guoyuan Liu (3860371)
Dan Li (106345)
Qifeng Ma (534752)
XinShan Zang (6059306)
Shuxun Yu (89036)
Jinfa Zhang (121196)
Jiwen Yu (534751)

December 2018

Table S5. Correlation coefficients between SNP markers and FL at maturity in CRI36 × Hai 7124 BILs. ...

Additional file 9: of Genetic variation of dynamic fiber elongation and developmental quantitative trait locus mapping of fiber length in upland cotton (Gossypium hirsutum L.)

Jianjiang Ma (3807421)
Yanhui Geng (4530784)
Wenfeng Pei (843644)
Man Wu (176916)
Xingli Li (736261)
Guoyuan Liu (3860371)
Dan Li (106345)
Qifeng Ma (534752)
XinShan Zang (6059306)
Shuxun Yu (89036)
Jinfa Zhang (121196)
Jiwen Yu (534751)

December 2018

Table S6.. KEGG analysis of all candidate genes associated with dynamic fiber length. (XLSX 14âkb

Additional file 3: of Comparative fiber property and transcriptome analyses reveal key genes potentially related to high fiber strength in cotton (Gossypium hirsutum L.) line MD52ne

Md Islam (257385)
David Fang (3399707)
Gregory Thyssen (531000)
Chris Delhom (2290288)
Yongliang Liu (561185)
Hee Kim (2025640)

February 2016

Differentially expressed genes at 20 DPA between MD52ne and MD90ne. This table contains 1080 allotet...

Table_3_Single-Locus and Multi-Locus Genome-Wide Association Studies in the Genetic Dissection of Fiber Quality Traits in Upland Cotton (Gossypium hirsutum L.).XLS

Chengqi Li (5640227)
Yuanzhi Fu (5640230)
Runrun Sun (5640233)
Yuanyuan Wang (20181)
Qinglian Wang (174003)

August 2018

A major breeding target in Upland cotton (Gossypium hirsutum L.) is to improve the fiber quality. To...

Additional file 2: of A high density SLAF-SNP genetic map and QTL detection for fibre quality traits in Gossypium hirsutum

Iftikhar Ali (185774)
Zhonghua Teng (531125)
Yuting Bai (3428096)
Qing Yang (67856)
Yongshui Hao (6059186)
Juan Hou (34052)
Yongbin Jia (6059189)
Lixia Tian (383098)
Xueying Liu (344877)
Zhaoyun Tan (3487865)
Wenwen Wang (534041)
Kiirya Kenneth (6059192)
Abdalla Sharkh (6059195)
Dexin Liu (138735)
Kai Guo (54091)
Jian Zhang (1682)
Dajun Liu (111263)
Zhengsheng Zhang (3487871)

December 2018

Table S2. QTL for fiber quality in RIL population in three environments (XLSX 20 kb

Table_2_Single-Locus and Multi-Locus Genome-Wide Association Studies in the Genetic Dissection of Fiber Quality Traits in Upland Cotton (Gossypium hirsutum L.).XLS

Chengqi Li (5640227)
Yuanzhi Fu (5640230)
Runrun Sun (5640233)
Yuanyuan Wang (20181)
Qinglian Wang (174003)

August 2018

A major breeding target in Upland cotton (Gossypium hirsutum L.) is to improve the fiber quality. To...

Table_3_Identification of Introgressed Alleles Conferring High Fiber Quality Derived From Gossypium barbadense L. in Secondary Mapping Populations of G. hirsutum L..XLSX

Yu Chen (4211599)
Guodong Liu (278986)
Hehuan Ma (5530952)
Zhangqiang Song (5530955)
Chuanyun Zhang (5530958)
Jingxia Zhang (286513)
Junhao Zhang (2539645)
Furong Wang (1555870)
Jun Zhang (48506)

July 2018

<p>The improvement of fiber quality is an essential goal in cotton breeding. In our previous studies...

Additional file 3: of Identification of stable quantitative trait loci (QTLs) for fiber quality traits across multiple environments in Gossypium hirsutum recombinant inbred line population

Muhammad Jamshed (1892518)
Fei Jia (688426)
Juwu Gong (781989)
Koffi Palanga (3467450)
Yuzhen Shi (781988)
Junwen Li (781986)
Haihong Shang (781990)
Aiying Liu (301366)
Tingting Chen (111216)
Zhen Zhang (86004)
Juan Cai (470988)
Qun Ge (781991)
Zhi Liu (165121)
Quanwei Lu (781993)
Xiaoying Deng (781994)
Yunna Tan (781995)
Harun or Rashid (3559178)
Zareen Sarfraz (3559172)
Murtaza Hassan (3559175)
Wankui Gong (781997)
Youlu Yuan (688107)

March 2016

Position and markers details of identified QTLs for fiber quality traits in an intraspecific RIL. (X...

Table_4_Single-Locus and Multi-Locus Genome-Wide Association Studies in the Genetic Dissection of Fiber Quality Traits in Upland Cotton (Gossypium hirsutum L.).XLS

Chengqi Li (5640227)
Yuanzhi Fu (5640230)
Runrun Sun (5640233)
Yuanyuan Wang (20181)
Qinglian Wang (174003)

August 2018

A major breeding target in Upland cotton (Gossypium hirsutum L.) is to improve the fiber quality. To...

Table_1_Single-Locus and Multi-Locus Genome-Wide Association Studies in the Genetic Dissection of Fiber Quality Traits in Upland Cotton (Gossypium hirsutum L.).XLS

Chengqi Li (5640227)
Yuanzhi Fu (5640230)
Runrun Sun (5640233)
Yuanyuan Wang (20181)
Qinglian Wang (174003)

August 2018

A major breeding target in Upland cotton (Gossypium hirsutum L.) is to improve the fiber quality. To...

Additional file 12: Table S8. of Genome-wide SSR-based association mapping for fiber quality in nation-wide upland cotton inbreed cultivars in China

Xinhui Nie (820233)
Cong Huang (555049)
Chunyuan You (3519035)
Wu Li (283210)
Wenxia Zhao (730714)
Chao Shen (520343)
Beibei Zhang (509356)
Hantao Wang (760364)
Zhenhua Yan (760367)
Baoshen Dai (3519038)
Maojun Wang (439244)
Xianlong Zhang (211930)
Zhongxu Lin (277115)

May 2016

The results of the comparison of the allelic variation loci-related fiber quality and the Gossypium ...

Additional file 13: Table S9. of Genome-wide SSR-based association mapping for fiber quality in nation-wide upland cotton inbreed cultivars in China

Xinhui Nie (820233)
Cong Huang (555049)
Chunyuan You (3519035)
Wu Li (283210)
Wenxia Zhao (730714)
Chao Shen (520343)
Beibei Zhang (509356)
Hantao Wang (760364)
Zhenhua Yan (760367)
Baoshen Dai (3519038)
Maojun Wang (439244)
Xianlong Zhang (211930)
Zhongxu Lin (277115)

May 2016

The results of the comparison of the allelic variation loci-related fiber quality and the Gossypium ...

Additional file 5: Table S4. of Fine mapping and RNA-Seq unravels candidate genes for a major QTL controlling multiple fiber quality traits at the T1 region in upland cotton

Dexin Liu (138735)
Jian Zhang (1682)
Xueying Liu (344877)
Wenwen Wang (534041)
Dajun Liu (111263)
Zhonghua Teng (531125)
Xiaomei Fang (1662148)
Zhaoyun Tan (3487865)
Shiyi Tang (3487862)
Jinghong Yang (3487868)
Jianwei Zhong (329148)
Zhengsheng Zhang (3487871)

April 2016

Correlation coefficient among fiber quality traits in F2 population. (XLSX 10Â kb

Additional file 2: Figure S1. of Fine mapping and RNA-Seq unravels candidate genes for a major QTL controlling multiple fiber quality traits at the T1 region in upland cotton

Dexin Liu (138735)
Jian Zhang (1682)
Xueying Liu (344877)
Wenwen Wang (534041)
Dajun Liu (111263)
Zhonghua Teng (531125)
Xiaomei Fang (1662148)
Zhaoyun Tan (3487865)
Shiyi Tang (3487862)
Jinghong Yang (3487868)
Jianwei Zhong (329148)
Zhengsheng Zhang (3487871)

April 2016

The frequency distribution of five fiber quality traits in 1434-individual F2 population in 2011. (D...

Additional file 1: Table S1. of Identification of candidate genes for fiber length quantitative trait loci through RNA-Seq and linkage and physical mapping in cotton

Xihua Li (148840)
Man Wu (176916)
Guoyuan Liu (3860371)
Wenfeng Pei (843644)
Honghong Zhai (799135)
Jiwen Yu (534751)
Jinfa Zhang (121196)
Shuxun Yu (89036)

May 2017

Average fiber quality of the two BILs tested in different environments based on Yu et al. [37]. (DOC...

Additional file 7: of Genetic variation of dynamic fiber elongation and developmental quantitative trait locus mapping of fiber length in upland cotton (Gossypium hirsutum L.)

Jianjiang Ma (3807421)
Yanhui Geng (4530784)
Wenfeng Pei (843644)
Man Wu (176916)
Xingli Li (736261)
Guoyuan Liu (3860371)
Dan Li (106345)
Qifeng Ma (534752)
XinShan Zang (6059306)
Shuxun Yu (89036)
Jinfa Zhang (121196)
Jiwen Yu (534751)

December 2018

Table S5. Correlation coefficients between SNP markers and FL at maturity in CRI36 × Hai 7124 BILs. ...

Additional file 9: of Genetic variation of dynamic fiber elongation and developmental quantitative trait locus mapping of fiber length in upland cotton (Gossypium hirsutum L.)

Jianjiang Ma (3807421)
Yanhui Geng (4530784)
Wenfeng Pei (843644)
Man Wu (176916)
Xingli Li (736261)
Guoyuan Liu (3860371)
Dan Li (106345)
Qifeng Ma (534752)
XinShan Zang (6059306)
Shuxun Yu (89036)
Jinfa Zhang (121196)
Jiwen Yu (534751)

December 2018

Table S6.. KEGG analysis of all candidate genes associated with dynamic fiber length. (XLSX 14âkb

Additional file 3: of Comparative fiber property and transcriptome analyses reveal key genes potentially related to high fiber strength in cotton (Gossypium hirsutum L.) line MD52ne

Md Islam (257385)
David Fang (3399707)
Gregory Thyssen (531000)
Chris Delhom (2290288)
Yongliang Liu (561185)
Hee Kim (2025640)

February 2016

Differentially expressed genes at 20 DPA between MD52ne and MD90ne. This table contains 1080 allotet...

Table_3_Single-Locus and Multi-Locus Genome-Wide Association Studies in the Genetic Dissection of Fiber Quality Traits in Upland Cotton (Gossypium hirsutum L.).XLS

Chengqi Li (5640227)
Yuanzhi Fu (5640230)
Runrun Sun (5640233)
Yuanyuan Wang (20181)
Qinglian Wang (174003)

August 2018

A major breeding target in Upland cotton (Gossypium hirsutum L.) is to improve the fiber quality. To...

Additional file 2: of A high density SLAF-SNP genetic map and QTL detection for fibre quality traits in Gossypium hirsutum

Iftikhar Ali (185774)
Zhonghua Teng (531125)
Yuting Bai (3428096)
Qing Yang (67856)
Yongshui Hao (6059186)
Juan Hou (34052)
Yongbin Jia (6059189)
Lixia Tian (383098)
Xueying Liu (344877)
Zhaoyun Tan (3487865)
Wenwen Wang (534041)
Kiirya Kenneth (6059192)
Abdalla Sharkh (6059195)
Dexin Liu (138735)
Kai Guo (54091)
Jian Zhang (1682)
Dajun Liu (111263)
Zhengsheng Zhang (3487871)

December 2018

Table S2. QTL for fiber quality in RIL population in three environments (XLSX 20 kb

Table_2_Single-Locus and Multi-Locus Genome-Wide Association Studies in the Genetic Dissection of Fiber Quality Traits in Upland Cotton (Gossypium hirsutum L.).XLS

Chengqi Li (5640227)
Yuanzhi Fu (5640230)
Runrun Sun (5640233)
Yuanyuan Wang (20181)
Qinglian Wang (174003)

August 2018

A major breeding target in Upland cotton (Gossypium hirsutum L.) is to improve the fiber quality. To...

Table_3_Identification of Introgressed Alleles Conferring High Fiber Quality Derived From Gossypium barbadense L. in Secondary Mapping Populations of G. hirsutum L..XLSX

Yu Chen (4211599)
Guodong Liu (278986)
Hehuan Ma (5530952)
Zhangqiang Song (5530955)
Chuanyun Zhang (5530958)
Jingxia Zhang (286513)
Junhao Zhang (2539645)
Furong Wang (1555870)
Jun Zhang (48506)

July 2018

<p>The improvement of fiber quality is an essential goal in cotton breeding. In our previous studies...

Additional file 3: of Identification of stable quantitative trait loci (QTLs) for fiber quality traits across multiple environments in Gossypium hirsutum recombinant inbred line population

Muhammad Jamshed (1892518)
Fei Jia (688426)
Juwu Gong (781989)
Koffi Palanga (3467450)
Yuzhen Shi (781988)
Junwen Li (781986)
Haihong Shang (781990)
Aiying Liu (301366)
Tingting Chen (111216)
Zhen Zhang (86004)
Juan Cai (470988)
Qun Ge (781991)
Zhi Liu (165121)
Quanwei Lu (781993)
Xiaoying Deng (781994)
Yunna Tan (781995)
Harun or Rashid (3559178)
Zareen Sarfraz (3559172)
Murtaza Hassan (3559175)
Wankui Gong (781997)
Youlu Yuan (688107)

March 2016

Position and markers details of identified QTLs for fiber quality traits in an intraspecific RIL. (X...

Table_4_Single-Locus and Multi-Locus Genome-Wide Association Studies in the Genetic Dissection of Fiber Quality Traits in Upland Cotton (Gossypium hirsutum L.).XLS

Chengqi Li (5640227)
Yuanzhi Fu (5640230)
Runrun Sun (5640233)
Yuanyuan Wang (20181)
Qinglian Wang (174003)

August 2018

A major breeding target in Upland cotton (Gossypium hirsutum L.) is to improve the fiber quality. To...

Table_1_Single-Locus and Multi-Locus Genome-Wide Association Studies in the Genetic Dissection of Fiber Quality Traits in Upland Cotton (Gossypium hirsutum L.).XLS

Chengqi Li (5640227)
Yuanzhi Fu (5640230)
Runrun Sun (5640233)
Yuanyuan Wang (20181)
Qinglian Wang (174003)

August 2018

A major breeding target in Upland cotton (Gossypium hirsutum L.) is to improve the fiber quality. To...

Additional file 12: Table S8. of Genome-wide SSR-based association mapping for fiber quality in nation-wide upland cotton inbreed cultivars in China

Xinhui Nie (820233)
Cong Huang (555049)
Chunyuan You (3519035)
Wu Li (283210)
Wenxia Zhao (730714)
Chao Shen (520343)
Beibei Zhang (509356)
Hantao Wang (760364)
Zhenhua Yan (760367)
Baoshen Dai (3519038)
Maojun Wang (439244)
Xianlong Zhang (211930)
Zhongxu Lin (277115)

May 2016

The results of the comparison of the allelic variation loci-related fiber quality and the Gossypium ...

Additional file 13: Table S9. of Genome-wide SSR-based association mapping for fiber quality in nation-wide upland cotton inbreed cultivars in China

Xinhui Nie (820233)
Cong Huang (555049)
Chunyuan You (3519035)
Wu Li (283210)
Wenxia Zhao (730714)
Chao Shen (520343)
Beibei Zhang (509356)
Hantao Wang (760364)
Zhenhua Yan (760367)
Baoshen Dai (3519038)
Maojun Wang (439244)
Xianlong Zhang (211930)
Zhongxu Lin (277115)

May 2016

The results of the comparison of the allelic variation loci-related fiber quality and the Gossypium ...

Additional file 3: Table S2. of Fine mapping and RNA-Seq unravels candidate genes for a major QTL controlling multiple fiber quality traits at the T1 region in upland cotton

Abstract

Extracted data

Additional file 3: Table S2. of Fine mapping and RNA-Seq unravels candidate genes for a major QTL controlling multiple fiber quality traits at the T1 region in upland cotton

Abstract

Extracted data

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