Clone verification and the identification of potential target genes for 360 Nipi clones; genes that are potentially targeted by more than one clone; identification of clones potentially targeting histone genes; phenotypic characterization; comparison with published data. (XLSX 211 kb
Testing whether ToxA-responsive genes defend against ToxA. This table lists the genes that were prev...
Additional file 8: Table S7. Enriched biological processes revealed by standard RNA-seq (infected sa...
Primers and gRNAs used in this study. The strain name (SX), allele name for deletions (mj), lincRNA ...
Details of how Nipi clones where selected after the second round of screening. (PDF 60 kb
Analysis of enrichment of predicted Nipi proteins in conserved protein complexes. (XLSX 136 kb
Species used in phylogenetic clustering listed in the same order as in Fig. 8. (XLSX 47 kb
Additional file 2: Table S1. Five biological replicates of four group samples used in this study
Raw data of Phsp-6::GFP reporter measurements. Gene-by-gene data of the fold change (FC) and adjuste...
Table of treatment comparison results. A table with the spots that are significantly different betwe...
Additional file 3: Table S2. Tissue-specific genes detected in single-worm samples
Strains and genotypes. Matrix with the strain names and genotypes of the recombinant inbred lines us...
Specificity of tissue-restricted RNAi strains. This table lists the results of RNAi feeding experime...
Additional file 4: Table S3. Enriched biological processes revealed by standard RNA-seq relative to ...
Raw data of size measurements. Gene-by-gene data of the fold change (FC) and adjusted P value (adj.p...
Additional file 9: Table S8. Attenuated biological processes revealed by standard RNA-seq (infected ...
Testing whether ToxA-responsive genes defend against ToxA. This table lists the genes that were prev...
Additional file 8: Table S7. Enriched biological processes revealed by standard RNA-seq (infected sa...
Primers and gRNAs used in this study. The strain name (SX), allele name for deletions (mj), lincRNA ...
Details of how Nipi clones where selected after the second round of screening. (PDF 60 kb
Analysis of enrichment of predicted Nipi proteins in conserved protein complexes. (XLSX 136 kb
Species used in phylogenetic clustering listed in the same order as in Fig. 8. (XLSX 47 kb
Additional file 2: Table S1. Five biological replicates of four group samples used in this study
Raw data of Phsp-6::GFP reporter measurements. Gene-by-gene data of the fold change (FC) and adjuste...
Table of treatment comparison results. A table with the spots that are significantly different betwe...
Additional file 3: Table S2. Tissue-specific genes detected in single-worm samples
Strains and genotypes. Matrix with the strain names and genotypes of the recombinant inbred lines us...
Specificity of tissue-restricted RNAi strains. This table lists the results of RNAi feeding experime...
Additional file 4: Table S3. Enriched biological processes revealed by standard RNA-seq relative to ...
Raw data of size measurements. Gene-by-gene data of the fold change (FC) and adjusted P value (adj.p...
Additional file 9: Table S8. Attenuated biological processes revealed by standard RNA-seq (infected ...
Testing whether ToxA-responsive genes defend against ToxA. This table lists the genes that were prev...
Additional file 8: Table S7. Enriched biological processes revealed by standard RNA-seq (infected sa...
Primers and gRNAs used in this study. The strain name (SX), allele name for deletions (mj), lincRNA ...