<p>The evolutionary rates for the stages of the three lineages were calculated using BEAST2. The mean evolutionary rates for the VRC26, CH103, and VRC01 lineages decreased about 80%, 45%, and 35% respectively over their study periods. However, the observed evolutionary rate decrease is not statistically significant for clade 08 light chain, clade H3, and L3. Each stage is labeled with the format of lineage name, chain name, and stage. Because clades of the VRC01 lineage showed more than 30% divergence from each other, we chose four representative clades (03+06, 08, H3, and L3) and calculated their evolutionary rates separately. The mean and 95% HPD are shown for each stage. Stages from the same chain of a lineage are connected to reveal lon...
<p><strong>Data from:</strong></p> <p><em>Cooper N. & Purvis A. (2009). What factors shape rates of ...
<p>N: the number of haplotypes in each box. Diagonal (bold): within haplogroup percentage genetic di...
<p>The effective size (<i>N<sub>e</sub></i>) of the populations evolved is given in the top row of t...
<p>The mean and 95% highest probability density interval (HPD) are shown for each stage. Stages from...
<p>To study the dynamics of evolutionary rate, selection pressure and mutability over time, we separ...
* Quantifying phenotypic evolutionary rates and their variation across phylogenetic trees is a major...
(A) From Fig 3, RWHs H1A1, H1B1 and H1C1 define lineage L28, while RWHs H2A2, H2B2 and H2C3 define l...
<p>Bayesian skyline plots showing the evolutionary and transmission histories of a) clade I and b) c...
1.Quantifying phenotypic evolutionary rates and their variation across phylogenetic trees is a major...
Motivation The evolution of antibody repertoires represents a hallmark feature of adaptive B-cell i...
<div><p>Horizontal bars indicate the relative rates of change among taxa for each family (where rate...
Molecular phylogenies are increasingly being used to investigate the patterns and mechanisms of macr...
<p>Black lines: individual empirical curves from the BEAST analysis. Blue (clade A) and red (clade B...
<p>The mean evolutionary rate per amino acid site within the UL32 gene was calculated to identify ge...
<p>This plot shows the estimated evolutionary rates for each CDS in RSVA and RSVB. Error bars repres...
<p><strong>Data from:</strong></p> <p><em>Cooper N. & Purvis A. (2009). What factors shape rates of ...
<p>N: the number of haplotypes in each box. Diagonal (bold): within haplogroup percentage genetic di...
<p>The effective size (<i>N<sub>e</sub></i>) of the populations evolved is given in the top row of t...
<p>The mean and 95% highest probability density interval (HPD) are shown for each stage. Stages from...
<p>To study the dynamics of evolutionary rate, selection pressure and mutability over time, we separ...
* Quantifying phenotypic evolutionary rates and their variation across phylogenetic trees is a major...
(A) From Fig 3, RWHs H1A1, H1B1 and H1C1 define lineage L28, while RWHs H2A2, H2B2 and H2C3 define l...
<p>Bayesian skyline plots showing the evolutionary and transmission histories of a) clade I and b) c...
1.Quantifying phenotypic evolutionary rates and their variation across phylogenetic trees is a major...
Motivation The evolution of antibody repertoires represents a hallmark feature of adaptive B-cell i...
<div><p>Horizontal bars indicate the relative rates of change among taxa for each family (where rate...
Molecular phylogenies are increasingly being used to investigate the patterns and mechanisms of macr...
<p>Black lines: individual empirical curves from the BEAST analysis. Blue (clade A) and red (clade B...
<p>The mean evolutionary rate per amino acid site within the UL32 gene was calculated to identify ge...
<p>This plot shows the estimated evolutionary rates for each CDS in RSVA and RSVB. Error bars repres...
<p><strong>Data from:</strong></p> <p><em>Cooper N. & Purvis A. (2009). What factors shape rates of ...
<p>N: the number of haplotypes in each box. Diagonal (bold): within haplogroup percentage genetic di...
<p>The effective size (<i>N<sub>e</sub></i>) of the populations evolved is given in the top row of t...