<p>(A-D) A representative 2D projection average was derived for each PlxnA1<sub>1-6</sub>-Fab complex by the further refinement of the images shown in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0156719#pone.0156719.g003" target="_blank">Fig 3</a>. Bar: 100 Å. (E-H) Cartoon representation of the modeled PlxnA1<sub>1-6</sub> protein (gray) upon simulated Fab binding. The viewing orientation for the complex models was arbitrarily chosen to maximize shape similarity with the EM images.</p
The tendency of docking scoring functions to generate crystal close conformations of ligands bound t...
<p>The model shows the final seven poses for the PIP-box peptide (cartoon) docked into the binding s...
<p><b>(A) in the <i>B</i>. <i>malayi</i> protein and (B) in the <i>H</i>. <i>sapiens</i> protein.</b...
<p>LAO docking poses are shown (purple) for (a) apo, (b) gen1, (c) gen4 and (d) gen6 aligned to the ...
Proteins play crucial roles in every cellular process by interacting with each other, nucleic acids,...
An adequate description of entire genomes has to include information on the three-dimensional (3D) s...
Computational methods for docking ligands have been shown to be remarkably dependent on precise prot...
<p>B1 and B2 shows molecular docking of Rv2005c with AM (red) & KM (blue) respectively, orange color...
<p><b>Copyright information:</b></p><p>Taken from "Setting up a large set of protein-ligand PDB comp...
<p>3D images obtained from native ACE (PDB 1O8A) (Panel A) and molecular docking simulation (Panel B...
Benchmarks for molecular docking have historically focused on re-docking the cognate ligand of a wel...
A realistic prediction of the structure of protein-protein complexes is of major importance to obtai...
Abstract: The success of ligand docking calculations typically depends on the quality of the recepto...
X-ray structures are known for three members of the Major Facilitator Superfamily (MFS) of membrane ...
Selected docking poses for Wozniak et al manuscript. File name include the structure id (PDBID or Al...
The tendency of docking scoring functions to generate crystal close conformations of ligands bound t...
<p>The model shows the final seven poses for the PIP-box peptide (cartoon) docked into the binding s...
<p><b>(A) in the <i>B</i>. <i>malayi</i> protein and (B) in the <i>H</i>. <i>sapiens</i> protein.</b...
<p>LAO docking poses are shown (purple) for (a) apo, (b) gen1, (c) gen4 and (d) gen6 aligned to the ...
Proteins play crucial roles in every cellular process by interacting with each other, nucleic acids,...
An adequate description of entire genomes has to include information on the three-dimensional (3D) s...
Computational methods for docking ligands have been shown to be remarkably dependent on precise prot...
<p>B1 and B2 shows molecular docking of Rv2005c with AM (red) & KM (blue) respectively, orange color...
<p><b>Copyright information:</b></p><p>Taken from "Setting up a large set of protein-ligand PDB comp...
<p>3D images obtained from native ACE (PDB 1O8A) (Panel A) and molecular docking simulation (Panel B...
Benchmarks for molecular docking have historically focused on re-docking the cognate ligand of a wel...
A realistic prediction of the structure of protein-protein complexes is of major importance to obtai...
Abstract: The success of ligand docking calculations typically depends on the quality of the recepto...
X-ray structures are known for three members of the Major Facilitator Superfamily (MFS) of membrane ...
Selected docking poses for Wozniak et al manuscript. File name include the structure id (PDBID or Al...
The tendency of docking scoring functions to generate crystal close conformations of ligands bound t...
<p>The model shows the final seven poses for the PIP-box peptide (cartoon) docked into the binding s...
<p><b>(A) in the <i>B</i>. <i>malayi</i> protein and (B) in the <i>H</i>. <i>sapiens</i> protein.</b...