Analysis of cow orthologues of human profile 27 genes. Nested circles show that of the 50 genes in human expression profile 27 and also affected by ETCHbox expression, 46 genes have orthologues in cow and of these 33 are expressed between oocyte and blastocyst in cow. Mfuzz clustering of the expression profiles of the 33 genes gave five profiles of which three are similar to human profile 27 with peak expression at 8-cell and/or 16-cell stages (clusters A, B, C). These three profiles contain the 19 bovine genes listed. GV, Germinal vesicle; MII, metaphase II oocyte; 4C, 4-cell; 8C, 8-cell; Bl, blastocyst. (PDF 346 kb
BACKGROUND: A central goal of evolutionary biology is to link genomic change to phenotypic evolution...
Table S3. Exhaustive and top-20 lists of up- and down-regulated genes in ipsilateral vs. contralater...
And supplementary text detailing the analysis used to identify clusters of differentially expressed ...
Fragments per kilobase per million reads (FPKM) values after ectopic expression. FPKM mapped for all...
The number of homeobox loci expressed in each of the assessed tissues and cell types. An FPKM of 2 w...
Pargfx alignment, Otx-specific domain, conserved non-coding elements and full human coding sequences...
Raw read counts after ectopic expression. Raw read counts from HiSeq4000 output mapped to human gene...
Heatmap showing human homeobox gene expression and gene names. Expression data for 242 homeobox loci...
ETCH box gene, pseudogene and retrocopy complements in placental mammal species. We classify a locus...
Gene names for homeobox loci expressed in four major expression âphasesâ identified during mouse...
Table S1. Exhaustive and top-20 lists of up- and down-regulated genes in post-partum lactating (L) v...
Table S1. Embryo recovery data. Detail information of in vivo embryo production and ICM/TE immunosur...
Kyoto Encyclopaedia of Genes and Genomes (KEGG) pathways enriched in the ovine mammary gland during ...
Synteny evidence for orthology of Argfx, Dprx, Leutx, Pargfx and Tprx loci between placental mammals...
Eutherian mammals share a common ancestor that evolved into two main placental types, i.e., hemotrop...
BACKGROUND: A central goal of evolutionary biology is to link genomic change to phenotypic evolution...
Table S3. Exhaustive and top-20 lists of up- and down-regulated genes in ipsilateral vs. contralater...
And supplementary text detailing the analysis used to identify clusters of differentially expressed ...
Fragments per kilobase per million reads (FPKM) values after ectopic expression. FPKM mapped for all...
The number of homeobox loci expressed in each of the assessed tissues and cell types. An FPKM of 2 w...
Pargfx alignment, Otx-specific domain, conserved non-coding elements and full human coding sequences...
Raw read counts after ectopic expression. Raw read counts from HiSeq4000 output mapped to human gene...
Heatmap showing human homeobox gene expression and gene names. Expression data for 242 homeobox loci...
ETCH box gene, pseudogene and retrocopy complements in placental mammal species. We classify a locus...
Gene names for homeobox loci expressed in four major expression âphasesâ identified during mouse...
Table S1. Exhaustive and top-20 lists of up- and down-regulated genes in post-partum lactating (L) v...
Table S1. Embryo recovery data. Detail information of in vivo embryo production and ICM/TE immunosur...
Kyoto Encyclopaedia of Genes and Genomes (KEGG) pathways enriched in the ovine mammary gland during ...
Synteny evidence for orthology of Argfx, Dprx, Leutx, Pargfx and Tprx loci between placental mammals...
Eutherian mammals share a common ancestor that evolved into two main placental types, i.e., hemotrop...
BACKGROUND: A central goal of evolutionary biology is to link genomic change to phenotypic evolution...
Table S3. Exhaustive and top-20 lists of up- and down-regulated genes in ipsilateral vs. contralater...
And supplementary text detailing the analysis used to identify clusters of differentially expressed ...