Additional file 4: of Bioinformatic prediction of transcription factor binding sites at promoter regions of genes for photoperiod and vernalization responses in model and temperate cereal plants

Additional file 14: of Comparison of Trihelix transcription factors between wheat and Brachypodium distachyon at genome-wide

Chengwei Wang (652074)
Yu Wang (12152)
Qi Pan (126009)
Shoukun Chen (4358179)
Cuizhu Feng (6370574)
Jiangbo Hai (6370577)
Haifeng Li (142063)

February 2019

The promoter regions of TaGT and BdGT genes in different subfamilies. (XLSX 14 kb

Additional file 13: of Comparison of Trihelix transcription factors between wheat and Brachypodium distachyon at genome-wide

Chengwei Wang (652074)
Yu Wang (12152)
Qi Pan (126009)
Shoukun Chen (4358179)
Cuizhu Feng (6370574)
Jiangbo Hai (6370577)
Haifeng Li (142063)

February 2019

More than 80% of TaGTs and BdGTs contained plant growth/development - and stress response-related ci...

Additional file 1: of Identification of a G2-like transcription factor, OsPHL3, functions as a negative regulator of flowering in rice by co-expression and reverse genetic analysis

Liping Zeng (3295554)
Xue Liu (420033)
Zhuangzhi Zhou (544617)
Dayong Li (205740)
Xianfeng Zhao (310968)
Lihuang Zhu (456727)
Yingfeng Luo (64395)
Songnian Hu (6480)

August 2018

Table S1. The Pearson correlation coefficient value between flowering time regulators (OsGI, Ghd7, O...

Additional file 3: of Bioinformatic prediction of transcription factor binding sites at promoter regions of genes for photoperiod and vernalization responses in model and temperate cereal plants

Fred Peng (57408)
Zhiqiu Hu (150363)
Rong-Cai Yang (492877)

August 2016

The predicted transcription factor binding sites (TFBSs) in the promoters of genes in the pathways o...

Additional file 5: of Bioinformatic prediction of transcription factor binding sites at promoter regions of genes for photoperiod and vernalization responses in model and temperate cereal plants

Fred Peng (57408)
Zhiqiu Hu (150363)
Rong-Cai Yang (492877)

August 2016

The intraspecific Tajimaâs D values of TFBSs in Arabidopsis, Brachypodium, wheat and barley. (XLS ...

Additional file 1: of Bioinformatics identification of new targets for improving low temperature stress tolerance in spring and winter wheat

Alain Tchagang (3843931)
Franรงois Fauteux (3843928)
Dan Tulpan (3843934)
Youlian Pan (68548)

March 2017

Selected and significant transcription factor gene interactions data inferred by the linear model an...

Additional file 30: of Comparison of Trihelix transcription factors between wheat and Brachypodium distachyon at genome-wide

Chengwei Wang (652074)
Yu Wang (12152)
Qi Pan (126009)
Shoukun Chen (4358179)
Cuizhu Feng (6370574)
Jiangbo Hai (6370577)
Haifeng Li (142063)

February 2019

Expression patterns of BdGT genes in various B. distachyon (a) organs (Leaf, inflorescence, anther, ...

Additional file 12: of Comparison of Trihelix transcription factors between wheat and Brachypodium distachyon at genome-wide

Chengwei Wang (652074)
Yu Wang (12152)
Qi Pan (126009)
Shoukun Chen (4358179)
Cuizhu Feng (6370574)
Jiangbo Hai (6370577)
Haifeng Li (142063)

February 2019

The promoter regions of TaGT and BdGT genes contained plant growth/development - and stress response...

Additional file 6: of Auxin controls circadian flower opening and closure in the waterlily

Meiyu Ke (5505689)
Zhen Gao (609801)
Jianqing Chen (50319)
Yuting Qiu (5505692)
Liangsheng Zhang (494306)
Xu Chen (432759)

July 2018

Description of flower opening-associated signaling events with downregulations. (A-F) GO items and h...

Additional file 29: of Comparison of Trihelix transcription factors between wheat and Brachypodium distachyon at genome-wide

Chengwei Wang (652074)
Yu Wang (12152)
Qi Pan (126009)
Shoukun Chen (4358179)
Cuizhu Feng (6370574)
Jiangbo Hai (6370577)
Haifeng Li (142063)

February 2019

Expression patterns of TaGT genes in various wheat tissues (a) and stresses (b).The expression data ...

Additional file 4: of RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways

Stephen Pearce (115425)
Nestor Kippes (3483818)
Andrew Chen (110838)
Juan Debernardi (3483821)
Jorge Dubcovsky (110843)

June 2016

FDR-adj P <0.01 PHYB/PHYC-regulated genes significant in just one experiment. In different tabs, 532...

2009, In silico analysis of transcription factor repertoire and prediction of stress responsive transcription factors in soybean

Keiichi Mochida
Takuhiro Yoshida
Tetsuya Sakurai
Kazuko Yamaguchi-shinozaki

September 2016

The interactions between transcription factors (TFs) and cis-regulatory DNA sequences control gene e...

2009, In silico analysis of transcription factor repertoire and prediction of stress responsive transcription factors in soybean

Keiichi Mochida
Takuhiro Yoshida
Tetsuya Sakurai
Kazuko Yamaguchi-shinozaki
Kazuo Shinozaki
Lam-son Phan Tran

September 2016

The interactions between transcription factors (TFs) and cis-regulatory DNA sequences control gene e...

2009, In silico analysis of transcription factor repertoire and prediction of stress responsive transcription factors in soybean

Keiichi Mochida
Takuhiro Yoshida
Tetsuya Sakurai
Kazuko Yamaguchi-shinozaki

August 2016

The interactions between transcription factors (TFs) and cis-regulatory DNA sequences control gene e...

Additional file 4: of Ubiquitin-related genes are differentially expressed in isogenic lines contrasting for pericarp cell size and grain weight in hexaploid wheat

Jemima Brinton (4799733)
James Simmonds (702706)
Cristobal Uauy (779399)

January 2018

Transcription factor binding sites identified in outside 5A DE transcripts. (XLSX 28 kb

Additional file 14: of Comparison of Trihelix transcription factors between wheat and Brachypodium distachyon at genome-wide

Chengwei Wang (652074)
Yu Wang (12152)
Qi Pan (126009)
Shoukun Chen (4358179)
Cuizhu Feng (6370574)
Jiangbo Hai (6370577)
Haifeng Li (142063)

February 2019

The promoter regions of TaGT and BdGT genes in different subfamilies. (XLSX 14 kb

Additional file 13: of Comparison of Trihelix transcription factors between wheat and Brachypodium distachyon at genome-wide

Chengwei Wang (652074)
Yu Wang (12152)
Qi Pan (126009)
Shoukun Chen (4358179)
Cuizhu Feng (6370574)
Jiangbo Hai (6370577)
Haifeng Li (142063)

February 2019

More than 80% of TaGTs and BdGTs contained plant growth/development - and stress response-related ci...

Additional file 1: of Identification of a G2-like transcription factor, OsPHL3, functions as a negative regulator of flowering in rice by co-expression and reverse genetic analysis

Liping Zeng (3295554)
Xue Liu (420033)
Zhuangzhi Zhou (544617)
Dayong Li (205740)
Xianfeng Zhao (310968)
Lihuang Zhu (456727)
Yingfeng Luo (64395)
Songnian Hu (6480)

August 2018

Table S1. The Pearson correlation coefficient value between flowering time regulators (OsGI, Ghd7, O...

Additional file 3: of Bioinformatic prediction of transcription factor binding sites at promoter regions of genes for photoperiod and vernalization responses in model and temperate cereal plants

Fred Peng (57408)
Zhiqiu Hu (150363)
Rong-Cai Yang (492877)

August 2016

The predicted transcription factor binding sites (TFBSs) in the promoters of genes in the pathways o...

Additional file 5: of Bioinformatic prediction of transcription factor binding sites at promoter regions of genes for photoperiod and vernalization responses in model and temperate cereal plants

Fred Peng (57408)
Zhiqiu Hu (150363)
Rong-Cai Yang (492877)

August 2016

The intraspecific Tajimaâs D values of TFBSs in Arabidopsis, Brachypodium, wheat and barley. (XLS ...

Additional file 1: of Bioinformatics identification of new targets for improving low temperature stress tolerance in spring and winter wheat

Alain Tchagang (3843931)
Franรงois Fauteux (3843928)
Dan Tulpan (3843934)
Youlian Pan (68548)

March 2017

Selected and significant transcription factor gene interactions data inferred by the linear model an...

Additional file 30: of Comparison of Trihelix transcription factors between wheat and Brachypodium distachyon at genome-wide

Chengwei Wang (652074)
Yu Wang (12152)
Qi Pan (126009)
Shoukun Chen (4358179)
Cuizhu Feng (6370574)
Jiangbo Hai (6370577)
Haifeng Li (142063)

February 2019

Expression patterns of BdGT genes in various B. distachyon (a) organs (Leaf, inflorescence, anther, ...

Additional file 12: of Comparison of Trihelix transcription factors between wheat and Brachypodium distachyon at genome-wide

Chengwei Wang (652074)
Yu Wang (12152)
Qi Pan (126009)
Shoukun Chen (4358179)
Cuizhu Feng (6370574)
Jiangbo Hai (6370577)
Haifeng Li (142063)

February 2019

The promoter regions of TaGT and BdGT genes contained plant growth/development - and stress response...

Additional file 6: of Auxin controls circadian flower opening and closure in the waterlily

Meiyu Ke (5505689)
Zhen Gao (609801)
Jianqing Chen (50319)
Yuting Qiu (5505692)
Liangsheng Zhang (494306)
Xu Chen (432759)

July 2018

Description of flower opening-associated signaling events with downregulations. (A-F) GO items and h...

Additional file 29: of Comparison of Trihelix transcription factors between wheat and Brachypodium distachyon at genome-wide

Chengwei Wang (652074)
Yu Wang (12152)
Qi Pan (126009)
Shoukun Chen (4358179)
Cuizhu Feng (6370574)
Jiangbo Hai (6370577)
Haifeng Li (142063)

February 2019

Expression patterns of TaGT genes in various wheat tissues (a) and stresses (b).The expression data ...

Additional file 4: of RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways

Stephen Pearce (115425)
Nestor Kippes (3483818)
Andrew Chen (110838)
Juan Debernardi (3483821)
Jorge Dubcovsky (110843)

June 2016

FDR-adj P <0.01 PHYB/PHYC-regulated genes significant in just one experiment. In different tabs, 532...

2009, In silico analysis of transcription factor repertoire and prediction of stress responsive transcription factors in soybean

Keiichi Mochida
Takuhiro Yoshida
Tetsuya Sakurai
Kazuko Yamaguchi-shinozaki

September 2016

The interactions between transcription factors (TFs) and cis-regulatory DNA sequences control gene e...

2009, In silico analysis of transcription factor repertoire and prediction of stress responsive transcription factors in soybean

Keiichi Mochida
Takuhiro Yoshida
Tetsuya Sakurai
Kazuko Yamaguchi-shinozaki
Kazuo Shinozaki
Lam-son Phan Tran

September 2016

The interactions between transcription factors (TFs) and cis-regulatory DNA sequences control gene e...

2009, In silico analysis of transcription factor repertoire and prediction of stress responsive transcription factors in soybean

Keiichi Mochida
Takuhiro Yoshida
Tetsuya Sakurai
Kazuko Yamaguchi-shinozaki

August 2016

The interactions between transcription factors (TFs) and cis-regulatory DNA sequences control gene e...

Additional file 4: of Ubiquitin-related genes are differentially expressed in isogenic lines contrasting for pericarp cell size and grain weight in hexaploid wheat

Jemima Brinton (4799733)
James Simmonds (702706)
Cristobal Uauy (779399)

January 2018

Transcription factor binding sites identified in outside 5A DE transcripts. (XLSX 28 kb

Additional file 14: of Comparison of Trihelix transcription factors between wheat and Brachypodium distachyon at genome-wide

Chengwei Wang (652074)
Yu Wang (12152)
Qi Pan (126009)
Shoukun Chen (4358179)
Cuizhu Feng (6370574)
Jiangbo Hai (6370577)
Haifeng Li (142063)

February 2019

The promoter regions of TaGT and BdGT genes in different subfamilies. (XLSX 14 kb

Additional file 13: of Comparison of Trihelix transcription factors between wheat and Brachypodium distachyon at genome-wide

Chengwei Wang (652074)
Yu Wang (12152)
Qi Pan (126009)
Shoukun Chen (4358179)
Cuizhu Feng (6370574)
Jiangbo Hai (6370577)
Haifeng Li (142063)

February 2019

More than 80% of TaGTs and BdGTs contained plant growth/development - and stress response-related ci...

Additional file 1: of Identification of a G2-like transcription factor, OsPHL3, functions as a negative regulator of flowering in rice by co-expression and reverse genetic analysis

Liping Zeng (3295554)
Xue Liu (420033)
Zhuangzhi Zhou (544617)
Dayong Li (205740)
Xianfeng Zhao (310968)
Lihuang Zhu (456727)
Yingfeng Luo (64395)
Songnian Hu (6480)

August 2018

Table S1. The Pearson correlation coefficient value between flowering time regulators (OsGI, Ghd7, O...

Additional file 4: of Bioinformatic prediction of transcription factor binding sites at promoter regions of genes for photoperiod and vernalization responses in model and temperate cereal plants

Abstract

Extracted data

Additional file 4: of Bioinformatic prediction of transcription factor binding sites at promoter regions of genes for photoperiod and vernalization responses in model and temperate cereal plants

Abstract

Extracted data

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