Numeric overview of differential expression levels of possible paralog pairs. (A) Number of paralog pairs that are differentially expressed with a FC of larger than 2 in 15 separate tissues. (B) Number of possible paralog pairs filtered on the minimum number of tissues in which a differential expression of larger than FC 2 is observed. E.g. in the bottom of the scale 27 possible paralog pairs have a FC of larger than 2 in all 15 tissue types listed in panel A. (C and D) The same analysis as in panels A and B respectively with a FC of 4 as cut-off value. With these criteria there are still 4 possible paralog pairs that have a FC larger than 4 in all 15 tissues. (JPG 130Â kb
Results from the Panther database gene set enrichment analysis (GSEA) comparing differences in GO ca...
<p>The transcriptome was assembled from Oujiang color varieties of common carp (RB - red with big bl...
Results from the Broad Institute gene set enrichment analysis (GSEA) highlighting significant pathwa...
Heatmap on the RPKM-normalized data for all the 16 tissue clusters. All the clusters are visualized,...
List of the 89 dissected tissues from 19 organs from adult Carps (1 male, 3 female) and their read c...
BACKGROUND\nThe common carp (Cyprinus carpio) is the oldest, most domesticated and one of the most...
Additional file 6: The up-regulated and down-regulated DEGs in three tissues of grass carp (FDR ≤ 0....
Phenotypic correlations between growth-related traits in eight common. Table S2. List of suggestive ...
Table S4. Expression level for 574 genes with top expression level in liver tissue. (XLSX 91 kb
FASTA file containg a set of 18241 ortholog groups that were obtained using InParanoid [35] for orth...
The data presented in this paper are related to the research article entitled “Transcriptome profili...
Additional file 1: Validation RNA-seq profiles by qRT-PCR. Data were expressed as mean±standard devi...
<p>Differential gene expression analysis between four different tissues of crucian carp.</p
Results from the Broad Institute gene set enrichment analysis (GSEA) highlighting significant pathwa...
Table S1. KEGG enrichment analysis of highly expressed genes in liver tissue. (XLSX 13 kb
Results from the Panther database gene set enrichment analysis (GSEA) comparing differences in GO ca...
<p>The transcriptome was assembled from Oujiang color varieties of common carp (RB - red with big bl...
Results from the Broad Institute gene set enrichment analysis (GSEA) highlighting significant pathwa...
Heatmap on the RPKM-normalized data for all the 16 tissue clusters. All the clusters are visualized,...
List of the 89 dissected tissues from 19 organs from adult Carps (1 male, 3 female) and their read c...
BACKGROUND\nThe common carp (Cyprinus carpio) is the oldest, most domesticated and one of the most...
Additional file 6: The up-regulated and down-regulated DEGs in three tissues of grass carp (FDR ≤ 0....
Phenotypic correlations between growth-related traits in eight common. Table S2. List of suggestive ...
Table S4. Expression level for 574 genes with top expression level in liver tissue. (XLSX 91 kb
FASTA file containg a set of 18241 ortholog groups that were obtained using InParanoid [35] for orth...
The data presented in this paper are related to the research article entitled “Transcriptome profili...
Additional file 1: Validation RNA-seq profiles by qRT-PCR. Data were expressed as mean±standard devi...
<p>Differential gene expression analysis between four different tissues of crucian carp.</p
Results from the Broad Institute gene set enrichment analysis (GSEA) highlighting significant pathwa...
Table S1. KEGG enrichment analysis of highly expressed genes in liver tissue. (XLSX 13 kb
Results from the Panther database gene set enrichment analysis (GSEA) comparing differences in GO ca...
<p>The transcriptome was assembled from Oujiang color varieties of common carp (RB - red with big bl...
Results from the Broad Institute gene set enrichment analysis (GSEA) highlighting significant pathwa...