<p>The available plasmid sequences that deposited in the NCBI GenBank database involved in each strain were extracted and analyzed using Local BLAST (Blastn). Whether the TAs of Ab3 appear in other selected strains was judged according to the fact if the relative genes in other strains displayed the orthologous segments with a query coverage of 30% and identity of 60%. The distribution of the TAs between different strains were identified and illustrated in a 3D graph. X, Y and Z-axis, respectively, denote TA superfamily, organism and the number of genes.</p
<p>A) The depicted phylogenetic tree was obtained using the Sequence Types (ST) of a panel of 59 epi...
<p>(A) Published amino acid sequences (NCBI GenBank) of the six ZIKV strains were used to construct ...
<p>Only selected regions for each of the three plasmids are shown. The percent of protein identity i...
<p>Bacterial species surveyed from 44 different classes are provided on the y-axis and the total num...
<p>The unrooted phylogenetic tree is based on a Bayesian analysis of 232<i>Vulcanisaeta distributa</...
Output from BLASTN searches of complete NCBI Pseudomonas plasmids >200 kbp against sequences of thre...
Metadata available from the NCBI Nucleotide, Bioproject, and Biosample databases for a compiled list...
The purpose of this paper is to examine functional regions of the completely sequenced DNA data of T...
<p>Bayesian analysis was performed to generate the dendrogram provided on the left hand side of the ...
The global clustering of gene families through network analysis has been demonstrated in whole genom...
Many plasmids are mobile genetic elements (MGEs) and, as other members of that group of DNA entities...
Protein-coding regions are represented by the orange arrows and key features/associated genes are sh...
<p><i>recA</i> gene sequence similarity values between strain P3B162<sup>T</sup> and its related <i>...
<p>The table headings represent Lineage (L), Species (Sp), Type and Strain name (Type/Strain) and nu...
Plasmids are mosaic in composition with a maintenance “backbone” as well as “accessory” genes obtain...
<p>A) The depicted phylogenetic tree was obtained using the Sequence Types (ST) of a panel of 59 epi...
<p>(A) Published amino acid sequences (NCBI GenBank) of the six ZIKV strains were used to construct ...
<p>Only selected regions for each of the three plasmids are shown. The percent of protein identity i...
<p>Bacterial species surveyed from 44 different classes are provided on the y-axis and the total num...
<p>The unrooted phylogenetic tree is based on a Bayesian analysis of 232<i>Vulcanisaeta distributa</...
Output from BLASTN searches of complete NCBI Pseudomonas plasmids >200 kbp against sequences of thre...
Metadata available from the NCBI Nucleotide, Bioproject, and Biosample databases for a compiled list...
The purpose of this paper is to examine functional regions of the completely sequenced DNA data of T...
<p>Bayesian analysis was performed to generate the dendrogram provided on the left hand side of the ...
The global clustering of gene families through network analysis has been demonstrated in whole genom...
Many plasmids are mobile genetic elements (MGEs) and, as other members of that group of DNA entities...
Protein-coding regions are represented by the orange arrows and key features/associated genes are sh...
<p><i>recA</i> gene sequence similarity values between strain P3B162<sup>T</sup> and its related <i>...
<p>The table headings represent Lineage (L), Species (Sp), Type and Strain name (Type/Strain) and nu...
Plasmids are mosaic in composition with a maintenance “backbone” as well as “accessory” genes obtain...
<p>A) The depicted phylogenetic tree was obtained using the Sequence Types (ST) of a panel of 59 epi...
<p>(A) Published amino acid sequences (NCBI GenBank) of the six ZIKV strains were used to construct ...
<p>Only selected regions for each of the three plasmids are shown. The percent of protein identity i...