Prevotella oligotypes representative sequences and BLASTn top hit. Table S1B. Bacteroides oligotypes representative sequences and BLASTn top hit. (DOCX 129 kb
Table S4. List of 468 protein orthologues in F. prausnitzii demonstrating differential abundance bet...
Core genome phylogenetic tree for Salmonella sp. The tree is mid-point rooted. Strains noted to be i...
Figure S2. BLASTn-based pairwise sequence coverage between available 31 complete and draft genomes o...
Pie charts showing the average relative abundance of Prevotella (A) and Bacteroides (B) oligotypes i...
Summary of the data received for each data set, as well as the format in which the data was used for...
Table S1. Metagenomic sequence data. Table S2. Predicted glycobiome of novel species. Table S3. ITS ...
Figure S2. Phyla identified along the gastrointestinal tract by culturomics (number of identified sp...
Table S2. Table of statistical analyses of differences in parameters across groups in Table 2. (XLSX...
Figure S1. Analysis of relative abundance of PolyFermS commensal bacteria phyla. Relative abundance ...
Table S5. List of prophage regions found in the F. prausnitzii genomes and their relationships to th...
Complete taxonomy table. Rarified (18,000 sequences) taxonomy table used in this study. (XLSX 219Â k...
Table S1. Table of statistical analyses of differences in parameters across groups in Table 1. (XLSX...
Table S1. Strains representing other species of the family Ruminococcaceae, used for comparative pur...
Table S1. PERMANOVA analysis used to assess microbial community structure differences. Table S2. Med...
Maximum-likelihood phylogenetic tree based on the comparative analysis of 16S rRNA gene sequences. G...
Table S4. List of 468 protein orthologues in F. prausnitzii demonstrating differential abundance bet...
Core genome phylogenetic tree for Salmonella sp. The tree is mid-point rooted. Strains noted to be i...
Figure S2. BLASTn-based pairwise sequence coverage between available 31 complete and draft genomes o...
Pie charts showing the average relative abundance of Prevotella (A) and Bacteroides (B) oligotypes i...
Summary of the data received for each data set, as well as the format in which the data was used for...
Table S1. Metagenomic sequence data. Table S2. Predicted glycobiome of novel species. Table S3. ITS ...
Figure S2. Phyla identified along the gastrointestinal tract by culturomics (number of identified sp...
Table S2. Table of statistical analyses of differences in parameters across groups in Table 2. (XLSX...
Figure S1. Analysis of relative abundance of PolyFermS commensal bacteria phyla. Relative abundance ...
Table S5. List of prophage regions found in the F. prausnitzii genomes and their relationships to th...
Complete taxonomy table. Rarified (18,000 sequences) taxonomy table used in this study. (XLSX 219Â k...
Table S1. Table of statistical analyses of differences in parameters across groups in Table 1. (XLSX...
Table S1. Strains representing other species of the family Ruminococcaceae, used for comparative pur...
Table S1. PERMANOVA analysis used to assess microbial community structure differences. Table S2. Med...
Maximum-likelihood phylogenetic tree based on the comparative analysis of 16S rRNA gene sequences. G...
Table S4. List of 468 protein orthologues in F. prausnitzii demonstrating differential abundance bet...
Core genome phylogenetic tree for Salmonella sp. The tree is mid-point rooted. Strains noted to be i...
Figure S2. BLASTn-based pairwise sequence coverage between available 31 complete and draft genomes o...
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