Publication date
October 2016
DOIAbstract
IPC protein dataset (2,324 proteins, derived from SWISS-2DPAGE and PIP-DB after 99 % redundancy removal) – fasta formatted. (FASTA 969 kb
IPC protein dataset (2,324 proteins, derived from SWISS-2DPAGE and PIP-DB after 99 % redundancy removal) – fasta formatted. (FASTA 969 kb
Table S1. List of transient protein-protein complexes used in the analysis (shown in green colour). ...
Principal Component Analysis. (a) first (x-axis) and second (y-axis) principal components capture mo...
Fasta file (core_plasmid.txt) containing 261 protein sequences of core proteins defined by Cazares e...
IPC peptide dataset (16,882 peptides, derived from Gauci et al. PHENYX and SEQUEST after 99 % redund...
Tables S1. Peptide spectral counts by best ranked UniProt ID for 118 human breast tissues. (XLSX 768...
Table S1. List of the identification codes of the PDB files of the datasets examined in the present ...
Supplementary Data are available, including Complexes.txt: The CYC2008 dataset, which consists of 40...
BP enrichment analyses of protein complexes identified from six PPIs data sets respectively;CC enric...
Distribution of CC according to Pfam database: A. Distribution of PCC and NCC according to Pfam data...
Workflow for generating a simulated proteogenomic database for yeast. (DOCX 743Â kb
Proteins identified in fractions obtained by Cibacron Blue/Protein A-based depletion (Accession, acc...
Proportion of redundant peptides in decoy databases for simulated proteogenomic search. (DOCX 14Â kb
Supplementary materials. Additional information about the IDPM database. (DOCX 39Â kb
STARPDB webserver annotation accuracy of secondary structure, accessible surface area, DNA and RNA m...
Sample impersonated multifasta protein sample; This file provides a quick view on how the organisms’...
Table S1. List of transient protein-protein complexes used in the analysis (shown in green colour). ...
Principal Component Analysis. (a) first (x-axis) and second (y-axis) principal components capture mo...
Fasta file (core_plasmid.txt) containing 261 protein sequences of core proteins defined by Cazares e...
IPC peptide dataset (16,882 peptides, derived from Gauci et al. PHENYX and SEQUEST after 99 % redund...
Tables S1. Peptide spectral counts by best ranked UniProt ID for 118 human breast tissues. (XLSX 768...
Table S1. List of the identification codes of the PDB files of the datasets examined in the present ...
Supplementary Data are available, including Complexes.txt: The CYC2008 dataset, which consists of 40...
BP enrichment analyses of protein complexes identified from six PPIs data sets respectively;CC enric...
Distribution of CC according to Pfam database: A. Distribution of PCC and NCC according to Pfam data...
Workflow for generating a simulated proteogenomic database for yeast. (DOCX 743Â kb
Proteins identified in fractions obtained by Cibacron Blue/Protein A-based depletion (Accession, acc...
Proportion of redundant peptides in decoy databases for simulated proteogenomic search. (DOCX 14Â kb
Supplementary materials. Additional information about the IDPM database. (DOCX 39Â kb
STARPDB webserver annotation accuracy of secondary structure, accessible surface area, DNA and RNA m...
Sample impersonated multifasta protein sample; This file provides a quick view on how the organisms’...
Table S1. List of transient protein-protein complexes used in the analysis (shown in green colour). ...
Principal Component Analysis. (a) first (x-axis) and second (y-axis) principal components capture mo...
Fasta file (core_plasmid.txt) containing 261 protein sequences of core proteins defined by Cazares e...
Add to ORKG