Predicted operon structure based on TSS-EMOTE experimental data and in silico transcription terminator finding. Note that this table includes two sheets for A. baumannii, corresponding to two published reference genomes (ATCC 17978, and ATCC 17978-mff). (XLSX 1528 kb
Selection of 22 genes upregulated after U0126 treatment. Selected genes that were significantly (Pâ...
Table S4. Identification of transcript 3′ ends and presence of a predicted rho-independent terminato...
Bacterial genes predicted to encode select symbiotic activities. Description: Table of all genes ide...
Promoter motifs in sequences upstream of TSS based on Improbizer [13] analysis. The last nt of all s...
Transcription start sites confirmed by 5′RACE. dRNA-Seq data are represented as number of read start...
Intricate multi-gene TCS foci. Each row shows all myxobacterial orthologues of intricate multi-gene ...
Coordinates of the Rho-dependent terminators predicted by RhoTermPredict in E. coli K-12 whole genom...
Table S3 listing all mapped TSSs; Table S4 listing previously published TSSs compared to our TSS map...
Additional file 3: Operon predictions. Column 1 contains genes, and column 2 contains the operon int...
A map of all the transcriptional features identified. 1. Paired-end RNA-Seq coverage of the plus str...
Table S1 - Read mapping statistics; Table S2 - Numbers of annotated genes and operons associated wit...
Statistics of predicted promoters by G4PromFinder, PromPredict, PePPER and bTSSfinder in the whole g...
Xenorhabdus bovienii genes predicted to encode LysR family transcription factors. Description: Table...
Informations about whole genome predictions by RhoTermPredict from E. coli K-12. (TXT 20868 kb
Table S3. Predicted positions of gene TSS in representative strains of other M types. (XLSX 148 kb
Selection of 22 genes upregulated after U0126 treatment. Selected genes that were significantly (Pâ...
Table S4. Identification of transcript 3′ ends and presence of a predicted rho-independent terminato...
Bacterial genes predicted to encode select symbiotic activities. Description: Table of all genes ide...
Promoter motifs in sequences upstream of TSS based on Improbizer [13] analysis. The last nt of all s...
Transcription start sites confirmed by 5′RACE. dRNA-Seq data are represented as number of read start...
Intricate multi-gene TCS foci. Each row shows all myxobacterial orthologues of intricate multi-gene ...
Coordinates of the Rho-dependent terminators predicted by RhoTermPredict in E. coli K-12 whole genom...
Table S3 listing all mapped TSSs; Table S4 listing previously published TSSs compared to our TSS map...
Additional file 3: Operon predictions. Column 1 contains genes, and column 2 contains the operon int...
A map of all the transcriptional features identified. 1. Paired-end RNA-Seq coverage of the plus str...
Table S1 - Read mapping statistics; Table S2 - Numbers of annotated genes and operons associated wit...
Statistics of predicted promoters by G4PromFinder, PromPredict, PePPER and bTSSfinder in the whole g...
Xenorhabdus bovienii genes predicted to encode LysR family transcription factors. Description: Table...
Informations about whole genome predictions by RhoTermPredict from E. coli K-12. (TXT 20868 kb
Table S3. Predicted positions of gene TSS in representative strains of other M types. (XLSX 148 kb
Selection of 22 genes upregulated after U0126 treatment. Selected genes that were significantly (Pâ...
Table S4. Identification of transcript 3′ ends and presence of a predicted rho-independent terminato...
Bacterial genes predicted to encode select symbiotic activities. Description: Table of all genes ide...