Additional file 3: Table S2. of Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

Additional file 3: Table S3. of Large-scale transcriptome sequencing reveals novel expression patterns for key sex-related genes in a sex-changing fish

Hui Liu (33624)
Melissa Lamm (3553643)
Kim Rutherford (45266)
Michael Black (246211)
John Godwin (211226)
Neil Gemmell (279711)

November 2015

Results of differential expression analysis for the brain (blue: male-biased contigs, red: female-bi...

Table_3_The Gene Toolkit Implicated in Functional Sex in Sparidae Hermaphrodites: Inferences From Comparative Transcriptomics.XLSX

Alexandros Tsakogiannis (6241283)
Tereza Manousaki (5031110)
Jacques Lagnel (743867)
Nikolaos Papanikolaou (4407856)
Nikos Papandroulakis (519774)
Constantinos C. Mylonas (3617945)
Costas S. Tsigenopoulos (231295)

January 2019

Sex-biased gene expression is the mode through which sex dimorphism arises from a nearly identical g...

Table_1_The Gene Toolkit Implicated in Functional Sex in Sparidae Hermaphrodites: Inferences From Comparative Transcriptomics.XLSX

Alexandros Tsakogiannis (6241283)
Tereza Manousaki (5031110)
Jacques Lagnel (743867)
Nikolaos Papanikolaou (4407856)
Nikos Papandroulakis (519774)
Constantinos C. Mylonas (3617945)
Costas S. Tsigenopoulos (231295)

January 2019

Sex-biased gene expression is the mode through which sex dimorphism arises from a nearly identical g...

Additional file 4: Table S3. of Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

Astrid BĂśhne (3408110)
Catherine Wilson (165841)
John Postlethwait (841459)
Walter Salzburger (15544)

November 2016

RAD loci differentiating males and females of the A. burtoni Chipwa wild-caught fish with correspond...

Additional file 8: Table S6. of Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

Astrid BĂśhne (3408110)
Catherine Wilson (165841)
John Postlethwait (841459)
Walter Salzburger (15544)

November 2016

Gene expression details of genes with strongest male and female bias on LGs 5 and 14 as well as gene...

Additional file 5: of Polygenic sex determination in the cichlid fish Astatotilapia burtoni

Natalie Roberts (3462176)
Scott Juntti (3462191)
Kaitlin Coyle (3462194)
Bethany Dumont (3462182)
M. Stanley (3462185)
Allyson Ryan (3462188)
Russell Fernald (3433061)
Reade Roberts (3462179)

October 2016

Expanded summary table of association of genetic markers with sex in families, including genetic mar...

Additional file 7: Figure S2. of Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

Astrid BĂśhne (3408110)
Catherine Wilson (165841)
John Postlethwait (841459)
Walter Salzburger (15544)

November 2016

Gene expression of A. burtoni lab strain along the reference chromosomes of the Nile tilapia. Gene e...

Additional file 1: of Polygenic sex determination in the cichlid fish Astatotilapia burtoni

Natalie Roberts (3462176)
Scott Juntti (3462191)
Kaitlin Coyle (3462194)
Bethany Dumont (3462182)
M. Stanley (3462185)
Allyson Ryan (3462188)
Russell Fernald (3433061)
Reade Roberts (3462179)

October 2016

Alignment of A. burtoni scaffolds to anchored O. niloticus (Nile tilapia) genome. (PDF 725 kb

Additional file 4: of Polygenic sex determination in the cichlid fish Astatotilapia burtoni

Natalie Roberts (3462176)
Scott Juntti (3462191)
Kaitlin Coyle (3462194)
Bethany Dumont (3462182)
M. Stanley (3462185)
Allyson Ryan (3462188)
Russell Fernald (3433061)
Reade Roberts (3462179)

October 2016

Linkage tests and RAD marker haplotypes spanning two chromosome fusions in two families. (XLSX 110 k...

Additional file 8: of Polygenic sex determination in the cichlid fish Astatotilapia burtoni

Natalie Roberts (3462176)
Scott Juntti (3462191)
Kaitlin Coyle (3462194)
Bethany Dumont (3462182)
M. Stanley (3462185)
Allyson Ryan (3462188)
Russell Fernald (3433061)
Reade Roberts (3462179)

October 2016

Gene annotations for scaffolds on LG13 and LG5-14 associated with sex. (XLSX 440 kb

Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

Böhne, Astrid
Wilson, Catherine A.
Postlethwait, John H.
Salzburger, Walter

January 2016

Sex chromosomes change more frequently in fish than in mammals or birds. However, certain chromosome...

Additional file 2: Table S2. of A new SNP-based vision of the genetics of sex determination in European sea bass (Dicentrarchus labrax)

Christos Palaiokostas (432876)
MichaĂŤl Bekaert (3577445)
John Taggart (3319647)
Karim Gharbi (432878)
Brendan McAndrew (3413420)
BĂŠatrice Chatain (3577448)
David Penman (3267282)
Marc Vandeputte (143688)

September 2015

Detailed positions of individual SNPs in the constructed genetic map. (CSV 281 kb

Additional file 1: of The Y chromosome sequence of the channel catfish suggests novel sex determination mechanisms in teleost fish

Lisui Bao (476355)
Changxu Tian (4181131)
Shikai Liu (245897)
Yu Zhang (12946)
Ahmed Elaswad (3352379)
Zihao Yuan (4851673)
Karim Khalil (6266552)
Fanyue Sun (433241)
Yujia Yang (1716034)
Tao Zhou (117050)
Ning Li (45258)
Suxu Tan (6266564)
Qifan Zeng (6109202)
Yang Liu (4829)
Yueru Li (4009952)
Yun Li (692280)
Dongya Gao (526635)
Rex Dunham (31998)
Kenneth Davis (26119)
Geoffrey Waldbieser (6266567)
Zhanjiang Liu (31986)

January 2019

Table S1. Differentially expressed genes located on chromosome 4 10-14 dpf. Table S2. Differentially...

Genetics and timing of sex determination in the East African cichlid fish Astatotilapia burtoni

Heule, Corina
Göppert, Carolin
Salzburger, Walter
Böhne, Astrid

January 2014

The factors determining sex are diverse in vertebrates and especially so in teleost fishes. Only a h...

Additional file 5: of Comparative analysis of a sex chromosome from the blackchin tilapia, Sarotherodon melanotheron

William Gammerdinger (2125228)
Matthew Conte (3461162)
Jean-FranĂ§ois Baroiller (3504608)
Helena DâCotta (3504611)
Thomas Kocher (244356)

October 2016

JASPAR analysis of transcription factor binding sites in the regions encompassing the shared SNPs. T...

Additional file 3: Table S3. of Large-scale transcriptome sequencing reveals novel expression patterns for key sex-related genes in a sex-changing fish

Hui Liu (33624)
Melissa Lamm (3553643)
Kim Rutherford (45266)
Michael Black (246211)
John Godwin (211226)
Neil Gemmell (279711)

November 2015

Results of differential expression analysis for the brain (blue: male-biased contigs, red: female-bi...

Table_3_The Gene Toolkit Implicated in Functional Sex in Sparidae Hermaphrodites: Inferences From Comparative Transcriptomics.XLSX

Alexandros Tsakogiannis (6241283)
Tereza Manousaki (5031110)
Jacques Lagnel (743867)
Nikolaos Papanikolaou (4407856)
Nikos Papandroulakis (519774)
Constantinos C. Mylonas (3617945)
Costas S. Tsigenopoulos (231295)

January 2019

Sex-biased gene expression is the mode through which sex dimorphism arises from a nearly identical g...

Table_1_The Gene Toolkit Implicated in Functional Sex in Sparidae Hermaphrodites: Inferences From Comparative Transcriptomics.XLSX

Alexandros Tsakogiannis (6241283)
Tereza Manousaki (5031110)
Jacques Lagnel (743867)
Nikolaos Papanikolaou (4407856)
Nikos Papandroulakis (519774)
Constantinos C. Mylonas (3617945)
Costas S. Tsigenopoulos (231295)

January 2019

Sex-biased gene expression is the mode through which sex dimorphism arises from a nearly identical g...

Additional file 4: Table S3. of Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

Astrid BĂśhne (3408110)
Catherine Wilson (165841)
John Postlethwait (841459)
Walter Salzburger (15544)

November 2016

RAD loci differentiating males and females of the A. burtoni Chipwa wild-caught fish with correspond...

Additional file 8: Table S6. of Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

Astrid BĂśhne (3408110)
Catherine Wilson (165841)
John Postlethwait (841459)
Walter Salzburger (15544)

November 2016

Gene expression details of genes with strongest male and female bias on LGs 5 and 14 as well as gene...

Additional file 5: of Polygenic sex determination in the cichlid fish Astatotilapia burtoni

Natalie Roberts (3462176)
Scott Juntti (3462191)
Kaitlin Coyle (3462194)
Bethany Dumont (3462182)
M. Stanley (3462185)
Allyson Ryan (3462188)
Russell Fernald (3433061)
Reade Roberts (3462179)

October 2016

Expanded summary table of association of genetic markers with sex in families, including genetic mar...

Additional file 7: Figure S2. of Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

Astrid BĂśhne (3408110)
Catherine Wilson (165841)
John Postlethwait (841459)
Walter Salzburger (15544)

November 2016

Gene expression of A. burtoni lab strain along the reference chromosomes of the Nile tilapia. Gene e...

Additional file 1: of Polygenic sex determination in the cichlid fish Astatotilapia burtoni

Natalie Roberts (3462176)
Scott Juntti (3462191)
Kaitlin Coyle (3462194)
Bethany Dumont (3462182)
M. Stanley (3462185)
Allyson Ryan (3462188)
Russell Fernald (3433061)
Reade Roberts (3462179)

October 2016

Alignment of A. burtoni scaffolds to anchored O. niloticus (Nile tilapia) genome. (PDF 725 kb

Additional file 4: of Polygenic sex determination in the cichlid fish Astatotilapia burtoni

Natalie Roberts (3462176)
Scott Juntti (3462191)
Kaitlin Coyle (3462194)
Bethany Dumont (3462182)
M. Stanley (3462185)
Allyson Ryan (3462188)
Russell Fernald (3433061)
Reade Roberts (3462179)

October 2016

Linkage tests and RAD marker haplotypes spanning two chromosome fusions in two families. (XLSX 110 k...

Additional file 8: of Polygenic sex determination in the cichlid fish Astatotilapia burtoni

Natalie Roberts (3462176)
Scott Juntti (3462191)
Kaitlin Coyle (3462194)
Bethany Dumont (3462182)
M. Stanley (3462185)
Allyson Ryan (3462188)
Russell Fernald (3433061)
Reade Roberts (3462179)

October 2016

Gene annotations for scaffolds on LG13 and LG5-14 associated with sex. (XLSX 440 kb

Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

Böhne, Astrid
Wilson, Catherine A.
Postlethwait, John H.
Salzburger, Walter

January 2016

Sex chromosomes change more frequently in fish than in mammals or birds. However, certain chromosome...

Additional file 2: Table S2. of A new SNP-based vision of the genetics of sex determination in European sea bass (Dicentrarchus labrax)

Christos Palaiokostas (432876)
MichaĂŤl Bekaert (3577445)
John Taggart (3319647)
Karim Gharbi (432878)
Brendan McAndrew (3413420)
BĂŠatrice Chatain (3577448)
David Penman (3267282)
Marc Vandeputte (143688)

September 2015

Detailed positions of individual SNPs in the constructed genetic map. (CSV 281 kb

Additional file 1: of The Y chromosome sequence of the channel catfish suggests novel sex determination mechanisms in teleost fish

Lisui Bao (476355)
Changxu Tian (4181131)
Shikai Liu (245897)
Yu Zhang (12946)
Ahmed Elaswad (3352379)
Zihao Yuan (4851673)
Karim Khalil (6266552)
Fanyue Sun (433241)
Yujia Yang (1716034)
Tao Zhou (117050)
Ning Li (45258)
Suxu Tan (6266564)
Qifan Zeng (6109202)
Yang Liu (4829)
Yueru Li (4009952)
Yun Li (692280)
Dongya Gao (526635)
Rex Dunham (31998)
Kenneth Davis (26119)
Geoffrey Waldbieser (6266567)
Zhanjiang Liu (31986)

January 2019

Table S1. Differentially expressed genes located on chromosome 4 10-14 dpf. Table S2. Differentially...

Genetics and timing of sex determination in the East African cichlid fish Astatotilapia burtoni

Heule, Corina
Göppert, Carolin
Salzburger, Walter
Böhne, Astrid

January 2014

The factors determining sex are diverse in vertebrates and especially so in teleost fishes. Only a h...

Additional file 5: of Comparative analysis of a sex chromosome from the blackchin tilapia, Sarotherodon melanotheron

William Gammerdinger (2125228)
Matthew Conte (3461162)
Jean-FranĂ§ois Baroiller (3504608)
Helena DâCotta (3504611)
Thomas Kocher (244356)

October 2016

JASPAR analysis of transcription factor binding sites in the regions encompassing the shared SNPs. T...

Additional file 3: Table S3. of Large-scale transcriptome sequencing reveals novel expression patterns for key sex-related genes in a sex-changing fish

Hui Liu (33624)
Melissa Lamm (3553643)
Kim Rutherford (45266)
Michael Black (246211)
John Godwin (211226)
Neil Gemmell (279711)

November 2015

Results of differential expression analysis for the brain (blue: male-biased contigs, red: female-bi...

Table_3_The Gene Toolkit Implicated in Functional Sex in Sparidae Hermaphrodites: Inferences From Comparative Transcriptomics.XLSX

Alexandros Tsakogiannis (6241283)
Tereza Manousaki (5031110)
Jacques Lagnel (743867)
Nikolaos Papanikolaou (4407856)
Nikos Papandroulakis (519774)
Constantinos C. Mylonas (3617945)
Costas S. Tsigenopoulos (231295)

January 2019

Sex-biased gene expression is the mode through which sex dimorphism arises from a nearly identical g...

Table_1_The Gene Toolkit Implicated in Functional Sex in Sparidae Hermaphrodites: Inferences From Comparative Transcriptomics.XLSX

Alexandros Tsakogiannis (6241283)
Tereza Manousaki (5031110)
Jacques Lagnel (743867)
Nikolaos Papanikolaou (4407856)
Nikos Papandroulakis (519774)
Constantinos C. Mylonas (3617945)
Costas S. Tsigenopoulos (231295)

January 2019

Sex-biased gene expression is the mode through which sex dimorphism arises from a nearly identical g...

Additional file 3: Table S2. of Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

Abstract

Extracted data

Additional file 3: Table S2. of Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

Abstract

Extracted data

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