Additional file 2: of The highly variable microbiota associated to intestinal mucosa correlates with growth and hypoxia resistance of sea bass, Dicentrarchus labrax, submitted to different nutritional histories

Additional file 4: Figure S3. of Under control: how a dietary additive can restore the gut microbiome and proteomic profile, and improve disease resilience in a marine teleostean fish fed vegetable diets

María Piazzon (4721733)
Josep Calduch-Giner (4230838)
Belén Fouz (811031)
Itziar Estensoro (421070)
Paula Simó-Mirabet (4721727)
Mónica Puyalto (4721730)
Vasileios Karalazos (3368960)
Oswaldo Palenzuela (4721736)
Ariadna Sitjà-Bobadilla (421074)
Jaume Pérez-Sánchez (421069)

December 2017

Krona analysis of the relative abundance of intestinal bacterial OTUs identified in fish fed D2. (HT...

Additional file 6: of Dietary aquaculture by-product hydrolysates: impact on the transcriptomic response of the intestinal mucosa of European seabass (Dicentrarchus labrax) fed low fish meal diets

Alexandre Leduc (270899)
Céline Zatylny-Gaudin (301040)
Marie Robert (5280416)
Erwan Corre (449013)
Gildas Corguille (5280425)
Hélène Castel (167403)
Antoine Lefevre-Scelles (5280413)
Vincent Fournier (5280422)
Enric Gisbert (110389)
Karl Andree (5280419)
Joël Henry (301050)

May 2018

IPA analysis: list of main pathways impacted by hydrolysate and high fish meal diets compared to low...

Additional file 1 of Deciphering the gut microbiome of grass carp through multi-omics approach

Ming Li (91180)
Hui Liang (503201)
Hongwei Yang (1367979)
Qianwen Ding (11998214)
Rui Xia (523256)
Jie Chen (5892)
Wenhao Zhou (2855447)
Yalin Yang (765546)
Zhen Zhang (86004)
Yuanyuan Yao (1644640)
Chao Ran (306432)
Zhigang Zhou (2371921)

January 2024

Additional file 1: Supplementary Figure S1. Experimental design and rarefaction curve analysis of mi...

Additional file 3: of The highly variable microbiota associated to intestinal mucosa correlates with growth and hypoxia resistance of sea bass, Dicentrarchus labrax, submitted to different nutritional histories

François-Joël Gatesoupe (3433490)
Christine Huelvan (3433493)
Nicolas Le Bayon (3433484)
Hervé Le Delliou (748150)
Lauriane Madec (3433496)
Olivier Mouchel (691187)
Patrick Quazuguel (748151)
David Mazurais (748148)
José-Luis Zambonino-Infante (3433487)

November 2016

Histogram showing the overwhelming dominance of Alpha- and Gamma-Proteobacteria among the OTUs detec...

Additional file 8: of The highly variable microbiota associated to intestinal mucosa correlates with growth and hypoxia resistance of sea bass, Dicentrarchus labrax, submitted to different nutritional histories

François-Joël Gatesoupe (3433490)
Christine Huelvan (3433493)
Nicolas Le Bayon (3433484)
Hervé Le Delliou (748150)
Lauriane Madec (3433496)
Olivier Mouchel (691187)
Patrick Quazuguel (748151)
David Mazurais (748148)
José-Luis Zambonino-Infante (3433487)

November 2016

Mean relative abundance of phylogenetic clusters among Bacteroidetes and Spirochaetae with significa...

The highly variable microbiota associated to intestinal mucosa correlates with growth and hypoxia resistance of sea bass, Dicentrarchus labrax, submitted to different nutritional histories

Gatesoupe, Francois-joel
Huelvan, Christine
Le Bayon, Nicolas
Le Delliou, Herve
Madec, Lauriane
Mouchel, Olivier
Quazuguel, Patrick
Mazurais, David
Zambonino-infante, Jose-luis

November 2016

Background The better understanding of how intestinal microbiota interacts with fish health is one ...

Additional file 2: of The variation profile of intestinal microbiota in blunt snout bream (Megalobrama amblycephala) during feeding habit transition

Jin Wei (424761)
Xianwu Guo (33484)
Han Liu (288039)
Yuanyuan Chen (165812)
Weimin Wang (145168)

September 2018

The cluster dendrogram of intestinal contents derived from nine diet sub-stages. Cluster dendrogram ...

Additional file 3: of The variation profile of intestinal microbiota in blunt snout bream (Megalobrama amblycephala) during feeding habit transition

Jin Wei (424761)
Xianwu Guo (33484)
Han Liu (288039)
Yuanyuan Chen (165812)
Weimin Wang (145168)

September 2018

Rarefaction curves estimating the richness (at a 97% similarity level) of intestinal microbiota deri...

Additional file 1: of Dietary aquaculture by-product hydrolysates: impact on the transcriptomic response of the intestinal mucosa of European seabass (Dicentrarchus labrax) fed low fish meal diets

Alexandre Leduc (270899)
Céline Zatylny-Gaudin (301040)
Marie Robert (5280416)
Erwan Corre (449013)
Gildas Corguille (5280425)
Hélène Castel (167403)
Antoine Lefevre-Scelles (5280413)
Vincent Fournier (5280422)
Enric Gisbert (110389)
Karl Andree (5280419)
Joël Henry (301050)

May 2018

Diet formulation and proximal composition. FM5, 5% fish meal diet; FM20, 20% fish meal diet; TH, til...

Additional file 1: of The variation profile of intestinal microbiota in blunt snout bream (Megalobrama amblycephala) during feeding habit transition

Jin Wei (424761)
Xianwu Guo (33484)
Han Liu (288039)
Yuanyuan Chen (165812)
Weimin Wang (145168)

September 2018

Mean proportion ± SE of each prey item in intestinal contents derived from nine diet sub-stages. Sam...

Additional file 6: of The variation profile of intestinal microbiota in blunt snout bream (Megalobrama amblycephala) during feeding habit transition

Jin Wei (424761)
Xianwu Guo (33484)
Han Liu (288039)
Yuanyuan Chen (165812)
Weimin Wang (145168)

September 2018

Rank-abundance curves of OTUs derived from the three diet groups. Rank abundance distribution curves...

Additional file 5: of The variation profile of intestinal microbiota in blunt snout bream (Megalobrama amblycephala) during feeding habit transition

Jin Wei (424761)
Xianwu Guo (33484)
Han Liu (288039)
Yuanyuan Chen (165812)
Weimin Wang (145168)

September 2018

Rank-abundance curves of OTUs derived from nine diet sub-stages. Rank abundance distribution curves ...

Data_Sheet_1_Transcriptome, intestinal microbiome and histomorphology profiling of differences in the response of Chinese sea bass (Lateolabrax maculatus) to Aeromonas hydrophila infection.PDF

Chao Pan (132139)
Yanran Zhu (12565988)
Kaixin Cao (12248569)
Juexian Li (14672207)
Siyu Wang (696358)
Jiahua Zhu (1519225)
Xiaoman Zeng (14672210)
Heqian Zhang (8489058)
Zhiwei Qin (840779)

February 2023

The Chinese sea bass (Lateolabrax maculatus) is an important aquaculture fish, but diseases caused b...

Additional file 5: of Dietary aquaculture by-product hydrolysates: impact on the transcriptomic response of the intestinal mucosa of European seabass (Dicentrarchus labrax) fed low fish meal diets

Alexandre Leduc (270899)
Céline Zatylny-Gaudin (301040)
Marie Robert (5280416)
Erwan Corre (449013)
Gildas Corguille (5280425)
Hélène Castel (167403)
Antoine Lefevre-Scelles (5280413)
Vincent Fournier (5280422)
Enric Gisbert (110389)
Karl Andree (5280419)
Joël Henry (301050)

May 2018

KEGG analysis: list of genes differentially expressed by hydrolysate and high fish meal diets compar...

Additional file 2: of Long-term feeding with high plant protein based diets in gilthead seabream (Sparus aurata, L.) leads to changes in the inflammatory and immune related gene expression at intestinal level

Guillem Estruch (5518379)
Maria Collado (5816447)
Raquel Monge-Ortiz (5518370)
Ana Tomás-Vidal (5518376)
Miguel Jover-Cerdá (5816450)
David Peñaranda (5816453)
Gaspar Pérez Martínez (620366)
Silvia Martínez-Llorens (4993925)

October 2018

Relative gene expression of candidate target genes in cDNA pooled samples. A) Interleukine-1β (il1β)...

Additional file 4: Figure S3. of Under control: how a dietary additive can restore the gut microbiome and proteomic profile, and improve disease resilience in a marine teleostean fish fed vegetable diets

María Piazzon (4721733)
Josep Calduch-Giner (4230838)
Belén Fouz (811031)
Itziar Estensoro (421070)
Paula Simó-Mirabet (4721727)
Mónica Puyalto (4721730)
Vasileios Karalazos (3368960)
Oswaldo Palenzuela (4721736)
Ariadna Sitjà-Bobadilla (421074)
Jaume Pérez-Sánchez (421069)

December 2017

Krona analysis of the relative abundance of intestinal bacterial OTUs identified in fish fed D2. (HT...

Additional file 6: of Dietary aquaculture by-product hydrolysates: impact on the transcriptomic response of the intestinal mucosa of European seabass (Dicentrarchus labrax) fed low fish meal diets

Alexandre Leduc (270899)
Céline Zatylny-Gaudin (301040)
Marie Robert (5280416)
Erwan Corre (449013)
Gildas Corguille (5280425)
Hélène Castel (167403)
Antoine Lefevre-Scelles (5280413)
Vincent Fournier (5280422)
Enric Gisbert (110389)
Karl Andree (5280419)
Joël Henry (301050)

May 2018

IPA analysis: list of main pathways impacted by hydrolysate and high fish meal diets compared to low...

Additional file 1 of Deciphering the gut microbiome of grass carp through multi-omics approach

Ming Li (91180)
Hui Liang (503201)
Hongwei Yang (1367979)
Qianwen Ding (11998214)
Rui Xia (523256)
Jie Chen (5892)
Wenhao Zhou (2855447)
Yalin Yang (765546)
Zhen Zhang (86004)
Yuanyuan Yao (1644640)
Chao Ran (306432)
Zhigang Zhou (2371921)

January 2024

Additional file 1: Supplementary Figure S1. Experimental design and rarefaction curve analysis of mi...

Additional file 3: of The highly variable microbiota associated to intestinal mucosa correlates with growth and hypoxia resistance of sea bass, Dicentrarchus labrax, submitted to different nutritional histories

François-Joël Gatesoupe (3433490)
Christine Huelvan (3433493)
Nicolas Le Bayon (3433484)
Hervé Le Delliou (748150)
Lauriane Madec (3433496)
Olivier Mouchel (691187)
Patrick Quazuguel (748151)
David Mazurais (748148)
José-Luis Zambonino-Infante (3433487)

November 2016

Histogram showing the overwhelming dominance of Alpha- and Gamma-Proteobacteria among the OTUs detec...

Additional file 8: of The highly variable microbiota associated to intestinal mucosa correlates with growth and hypoxia resistance of sea bass, Dicentrarchus labrax, submitted to different nutritional histories

François-Joël Gatesoupe (3433490)
Christine Huelvan (3433493)
Nicolas Le Bayon (3433484)
Hervé Le Delliou (748150)
Lauriane Madec (3433496)
Olivier Mouchel (691187)
Patrick Quazuguel (748151)
David Mazurais (748148)
José-Luis Zambonino-Infante (3433487)

November 2016

Mean relative abundance of phylogenetic clusters among Bacteroidetes and Spirochaetae with significa...

The highly variable microbiota associated to intestinal mucosa correlates with growth and hypoxia resistance of sea bass, Dicentrarchus labrax, submitted to different nutritional histories

Gatesoupe, Francois-joel
Huelvan, Christine
Le Bayon, Nicolas
Le Delliou, Herve
Madec, Lauriane
Mouchel, Olivier
Quazuguel, Patrick
Mazurais, David
Zambonino-infante, Jose-luis

November 2016

Background The better understanding of how intestinal microbiota interacts with fish health is one ...

Additional file 2: of The variation profile of intestinal microbiota in blunt snout bream (Megalobrama amblycephala) during feeding habit transition

Jin Wei (424761)
Xianwu Guo (33484)
Han Liu (288039)
Yuanyuan Chen (165812)
Weimin Wang (145168)

September 2018

The cluster dendrogram of intestinal contents derived from nine diet sub-stages. Cluster dendrogram ...

Additional file 3: of The variation profile of intestinal microbiota in blunt snout bream (Megalobrama amblycephala) during feeding habit transition

Jin Wei (424761)
Xianwu Guo (33484)
Han Liu (288039)
Yuanyuan Chen (165812)
Weimin Wang (145168)

September 2018

Rarefaction curves estimating the richness (at a 97% similarity level) of intestinal microbiota deri...

Additional file 1: of Dietary aquaculture by-product hydrolysates: impact on the transcriptomic response of the intestinal mucosa of European seabass (Dicentrarchus labrax) fed low fish meal diets

Alexandre Leduc (270899)
Céline Zatylny-Gaudin (301040)
Marie Robert (5280416)
Erwan Corre (449013)
Gildas Corguille (5280425)
Hélène Castel (167403)
Antoine Lefevre-Scelles (5280413)
Vincent Fournier (5280422)
Enric Gisbert (110389)
Karl Andree (5280419)
Joël Henry (301050)

May 2018

Diet formulation and proximal composition. FM5, 5% fish meal diet; FM20, 20% fish meal diet; TH, til...

Additional file 1: of The variation profile of intestinal microbiota in blunt snout bream (Megalobrama amblycephala) during feeding habit transition

Jin Wei (424761)
Xianwu Guo (33484)
Han Liu (288039)
Yuanyuan Chen (165812)
Weimin Wang (145168)

September 2018

Mean proportion ± SE of each prey item in intestinal contents derived from nine diet sub-stages. Sam...

Additional file 6: of The variation profile of intestinal microbiota in blunt snout bream (Megalobrama amblycephala) during feeding habit transition

Jin Wei (424761)
Xianwu Guo (33484)
Han Liu (288039)
Yuanyuan Chen (165812)
Weimin Wang (145168)

September 2018

Rank-abundance curves of OTUs derived from the three diet groups. Rank abundance distribution curves...

Additional file 5: of The variation profile of intestinal microbiota in blunt snout bream (Megalobrama amblycephala) during feeding habit transition

Jin Wei (424761)
Xianwu Guo (33484)
Han Liu (288039)
Yuanyuan Chen (165812)
Weimin Wang (145168)

September 2018

Rank-abundance curves of OTUs derived from nine diet sub-stages. Rank abundance distribution curves ...

Data_Sheet_1_Transcriptome, intestinal microbiome and histomorphology profiling of differences in the response of Chinese sea bass (Lateolabrax maculatus) to Aeromonas hydrophila infection.PDF

Chao Pan (132139)
Yanran Zhu (12565988)
Kaixin Cao (12248569)
Juexian Li (14672207)
Siyu Wang (696358)
Jiahua Zhu (1519225)
Xiaoman Zeng (14672210)
Heqian Zhang (8489058)
Zhiwei Qin (840779)

February 2023

The Chinese sea bass (Lateolabrax maculatus) is an important aquaculture fish, but diseases caused b...

Additional file 5: of Dietary aquaculture by-product hydrolysates: impact on the transcriptomic response of the intestinal mucosa of European seabass (Dicentrarchus labrax) fed low fish meal diets

Alexandre Leduc (270899)
Céline Zatylny-Gaudin (301040)
Marie Robert (5280416)
Erwan Corre (449013)
Gildas Corguille (5280425)
Hélène Castel (167403)
Antoine Lefevre-Scelles (5280413)
Vincent Fournier (5280422)
Enric Gisbert (110389)
Karl Andree (5280419)
Joël Henry (301050)

May 2018

KEGG analysis: list of genes differentially expressed by hydrolysate and high fish meal diets compar...

Additional file 2: of Long-term feeding with high plant protein based diets in gilthead seabream (Sparus aurata, L.) leads to changes in the inflammatory and immune related gene expression at intestinal level

Guillem Estruch (5518379)
Maria Collado (5816447)
Raquel Monge-Ortiz (5518370)
Ana Tomás-Vidal (5518376)
Miguel Jover-Cerdá (5816450)
David Peñaranda (5816453)
Gaspar Pérez Martínez (620366)
Silvia Martínez-Llorens (4993925)

October 2018

Relative gene expression of candidate target genes in cDNA pooled samples. A) Interleukine-1β (il1β)...

Additional file 4: Figure S3. of Under control: how a dietary additive can restore the gut microbiome and proteomic profile, and improve disease resilience in a marine teleostean fish fed vegetable diets

María Piazzon (4721733)
Josep Calduch-Giner (4230838)
Belén Fouz (811031)
Itziar Estensoro (421070)
Paula Simó-Mirabet (4721727)
Mónica Puyalto (4721730)
Vasileios Karalazos (3368960)
Oswaldo Palenzuela (4721736)
Ariadna Sitjà-Bobadilla (421074)
Jaume Pérez-Sánchez (421069)

December 2017

Krona analysis of the relative abundance of intestinal bacterial OTUs identified in fish fed D2. (HT...

Additional file 6: of Dietary aquaculture by-product hydrolysates: impact on the transcriptomic response of the intestinal mucosa of European seabass (Dicentrarchus labrax) fed low fish meal diets

Alexandre Leduc (270899)
Céline Zatylny-Gaudin (301040)
Marie Robert (5280416)
Erwan Corre (449013)
Gildas Corguille (5280425)
Hélène Castel (167403)
Antoine Lefevre-Scelles (5280413)
Vincent Fournier (5280422)
Enric Gisbert (110389)
Karl Andree (5280419)
Joël Henry (301050)

May 2018

IPA analysis: list of main pathways impacted by hydrolysate and high fish meal diets compared to low...

Additional file 1 of Deciphering the gut microbiome of grass carp through multi-omics approach

Ming Li (91180)
Hui Liang (503201)
Hongwei Yang (1367979)
Qianwen Ding (11998214)
Rui Xia (523256)
Jie Chen (5892)
Wenhao Zhou (2855447)
Yalin Yang (765546)
Zhen Zhang (86004)
Yuanyuan Yao (1644640)
Chao Ran (306432)
Zhigang Zhou (2371921)

January 2024

Additional file 1: Supplementary Figure S1. Experimental design and rarefaction curve analysis of mi...

Additional file 2: of The highly variable microbiota associated to intestinal mucosa correlates with growth and hypoxia resistance of sea bass, Dicentrarchus labrax, submitted to different nutritional histories

Abstract

Extracted data

Additional file 2: of The highly variable microbiota associated to intestinal mucosa correlates with growth and hypoxia resistance of sea bass, Dicentrarchus labrax, submitted to different nutritional histories

Abstract

Extracted data

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