Maximum likelihood (ML) tree of Volvox sect. Volvox based on ITS region of nuclear ribosomal DNA (ITS-1, 5.8S rDNA, and ITS-2) (S1 Table).

Maximum likelihood tree for a combined mitochondrial (16S rRNA) and nuclear (Rag1) DNA data set of 1063 bp showing phylogenetic relationships among 16 recognized ranixalid species and one outgroup species.

Sonali Garg (846879)
S. D. Biju (472564)

November 2016

Bayesian Posterior Probabilities and RaxML Bootstrap values >50% are indicated above and below th...

Maximum likelihood (ML) and Bayesian inference (BI) trees based on the partial sequences of the partial SSU rDNA (437 bp) of Blastocystis sp. isolates of the present study.

Carolina Valença Barbosa (4926067)
Magali Muniz Barreto (4926058)
Rosemary de Jesus Andrade (4926076)
Fernando Sodré (4926061)
Claudia Masini d’Avila-Levy (4926064)
José Mauro Peralta (4926070)
Ricardo Pereira Igreja (4926079)
Heloisa Werneck de Macedo (4926055)
Helena Lucia Carneiro Santos (4926073)

March 2018

The high genetic divergence of rDNA gene revealed six clusters (denoted by ST1, 2, 3, 4, 8 and No...

Maximum likelihood (ML) phylogenetic tree of ribosomal gene sequences.

Olga A. Glazunova (5329184)
Natalia V. Shakhova (5329193)
Nadezhda V. Psurtseva (5329187)
Konstantin V. Moiseenko (3842116)
Sergei Y. Kleimenov (5329190)
Tatiana V. Fedorova (3842110)

June 2018

Numbers at nodes are bootstrap percentages from 100 replicates. Fungi from the residual and the c...

Maximum likelihood (ML) tree of Volvox sect. Volvox and other colonial Volvocales based on rbcL and psbC genes (S1 Table).

Hisayoshi Nozaki (78874)
Noriko Ueki (3361262)
Nanako Isaka (3361268)
Tokiko Saigo (3361265)
Kayoko Yamamoto (825617)
Ryo Matsuzaki (222998)
Fumio Takahashi (502447)
Ken-ichi Wakabayashi (200193)
Masanobu Kawachi (492757)

November 2016

Bootstrap values from ML (left) and maximum parsimony (right) analyses are shown on the branches....

Maximum likelihood (ML) tree inferred from the At103 DNA sequences of Prunus.

Liang Zhao (94728)
Xi-Wang Jiang (2832851)
Yun-juan Zuo (2832857)
Xiao-Lin Liu (559916)
Siew-Wai Chin (2832860)
Rosemarie Haberle (116181)
Daniel Potter (52965)
Zhao-Yang Chang (2832854)
Jun Wen (433853)

June 2016

The results of ML bootstrap analysis are shown above the branches. Bootstrap values >50% are show...

Maximum likelihood tree inferred from analysis of combined partial SSU rDNA and ITS1 sequences of parasites.

Monika Mendlová (322454)
Yves Desdevises (47794)
Kristína Civáňová (322455)
Antoine Pariselle (322456)
Andrea Šimková (74744)

February 2013

Bootstrap percentages for maximum likelihood, maximum parsimony, minimum evolution (above branche...

Comparison of plastome and nuclear rDNA ML gene trees for Taxillus species.

Huei-Jiun Su (661213)
Shu-ling Liang (11292774)
Daniel L. Nickrent (11292777)

August 2021

A. ML tree derived from an analysis of the whole plastome dataset. This tree is generally congruent ...

Maximum likelihood tree inferred from analysis of LSU rDNA sequences of parasites.

Monika Mendlová (322454)
Yves Desdevises (47794)
Kristína Civáňová (322455)
Antoine Pariselle (322456)
Andrea Šimková (74744)

February 2013

Bootstrap percentages for maximum likelihood, maximum parsimony, minimum evolution (above branche...

Phylogenetic tree based on 16S rDNA sequences using the Maximum Likelihood method.

Kyoko Hagino (492755)
Ryo Onuma (492756)
Masanobu Kawachi (492757)
Takeo Horiguchi (492758)

December 2013

Gloeobacter violaceus was used as an out-group. The numbers on each node indicate the boot...

Phylogenetic tree based on 18S rDNA sequences using the Maximum Likelihood method.

Kyoko Hagino (492755)
Ryo Onuma (492756)
Masanobu Kawachi (492757)
Takeo Horiguchi (492758)

December 2013

Representatives of the Pavlovophyceae were used as an out-group. Asterisks refer to the clade nam...

Phylogenetic relationships among 13 strains of three forms of Volvox carteri.

Kaoru Kawafune (182371)
Yuichi Hongoh (182377)
Takashi Hamaji (182380)
Tomoaki Sakamoto (691621)
Tetsuya Kurata (166586)
Shunsuke Hirooka (629734)
Shin-ya Miyagishima (233814)
Hisayoshi Nozaki (78874)

February 2015

The tree was inferred using the maximum-likelihood (ML) method based on alignment of 471 nucleoti...

Phylogenetic positions of Volvox reticuliferus Nozaki sp. nov. and V. africanus G. S. West within the advanced members of the Volvocaceae (Eudorina group [8, 23]), as inferred from 6021 base pairs of five chloroplast genes.

Hisayoshi Nozaki (78874)
Ryo Matsuzaki (222998)
Kayoko Yamamoto (825617)
Masanobu Kawachi (492757)
Fumio Takahashi (502447)

November 2015

The tree was constructed by Bayesian inference unlinked GTR+I+G, F81+I+G and GTR+I+G models for t...

Maximum-likelihood (ML) tree inferred using 16S rRNA sequences.

Rey C. Thomas Jr (507134)
Demian A. Willette (507135)
Kent E. Carpenter (152167)
Mudjekeewis D. Santos (325851)

January 2014

Bootstrap support values were calculated using 1,000 replicates. Sequences of S. hualiensis</i...

Phylogenetic tree based on plastid 16S rDNA sequences using the Maximum Likelihood method.

Kyoko Hagino (492755)
Ryo Onuma (492756)
Masanobu Kawachi (492757)
Takeo Horiguchi (492758)

December 2013

Representatives of the Pavlovophyceae were used as an out-group. The numbers on each node indicat...

Phylogenetic tree on the basis of 16S rRNA gene sequences by neighbor-joining method.

Nurhidayu Al-saari (789006)
Feng Gao (3548)
Amin A.K.M. Rohul (789007)
Kazumichi Sato (789008)
Keisuke Sato (789009)
Sayaka Mino (789010)
Wataru Suda (395421)
Kenshiro Oshima (140130)
Masahira Hattori (2579)
Moriya Ohkuma (116005)
Pedro M. Meirelles (160004)
Fabiano L. Thompson (153990)
Cristiane Thompson (758007)
Gilberto M. A. Filho (789011)
Bruno Gomez-Gil (731401)
Toko Sawabe (789012)
Tomoo Sawabe (627132)

August 2015

Bootstrap values are on 500 replicates. The topology of branch with the bootstrap value was also ...

Maximum likelihood tree for a combined mitochondrial (16S rRNA) and nuclear (Rag1) DNA data set of 1063 bp showing phylogenetic relationships among 16 recognized ranixalid species and one outgroup species.

Sonali Garg (846879)
S. D. Biju (472564)

November 2016

Bayesian Posterior Probabilities and RaxML Bootstrap values >50% are indicated above and below th...

Maximum likelihood (ML) and Bayesian inference (BI) trees based on the partial sequences of the partial SSU rDNA (437 bp) of Blastocystis sp. isolates of the present study.

Carolina Valença Barbosa (4926067)
Magali Muniz Barreto (4926058)
Rosemary de Jesus Andrade (4926076)
Fernando Sodré (4926061)
Claudia Masini d’Avila-Levy (4926064)
José Mauro Peralta (4926070)
Ricardo Pereira Igreja (4926079)
Heloisa Werneck de Macedo (4926055)
Helena Lucia Carneiro Santos (4926073)

March 2018

The high genetic divergence of rDNA gene revealed six clusters (denoted by ST1, 2, 3, 4, 8 and No...

Maximum likelihood (ML) phylogenetic tree of ribosomal gene sequences.

Olga A. Glazunova (5329184)
Natalia V. Shakhova (5329193)
Nadezhda V. Psurtseva (5329187)
Konstantin V. Moiseenko (3842116)
Sergei Y. Kleimenov (5329190)
Tatiana V. Fedorova (3842110)

June 2018

Numbers at nodes are bootstrap percentages from 100 replicates. Fungi from the residual and the c...

Maximum likelihood (ML) tree of Volvox sect. Volvox and other colonial Volvocales based on rbcL and psbC genes (S1 Table).

Hisayoshi Nozaki (78874)
Noriko Ueki (3361262)
Nanako Isaka (3361268)
Tokiko Saigo (3361265)
Kayoko Yamamoto (825617)
Ryo Matsuzaki (222998)
Fumio Takahashi (502447)
Ken-ichi Wakabayashi (200193)
Masanobu Kawachi (492757)

November 2016

Bootstrap values from ML (left) and maximum parsimony (right) analyses are shown on the branches....

Maximum likelihood (ML) tree inferred from the At103 DNA sequences of Prunus.

Liang Zhao (94728)
Xi-Wang Jiang (2832851)
Yun-juan Zuo (2832857)
Xiao-Lin Liu (559916)
Siew-Wai Chin (2832860)
Rosemarie Haberle (116181)
Daniel Potter (52965)
Zhao-Yang Chang (2832854)
Jun Wen (433853)

June 2016

The results of ML bootstrap analysis are shown above the branches. Bootstrap values >50% are show...

Maximum likelihood tree inferred from analysis of combined partial SSU rDNA and ITS1 sequences of parasites.

Monika Mendlová (322454)
Yves Desdevises (47794)
Kristína Civáňová (322455)
Antoine Pariselle (322456)
Andrea Šimková (74744)

February 2013

Bootstrap percentages for maximum likelihood, maximum parsimony, minimum evolution (above branche...

Comparison of plastome and nuclear rDNA ML gene trees for Taxillus species.

Huei-Jiun Su (661213)
Shu-ling Liang (11292774)
Daniel L. Nickrent (11292777)

August 2021

A. ML tree derived from an analysis of the whole plastome dataset. This tree is generally congruent ...

Maximum likelihood tree inferred from analysis of LSU rDNA sequences of parasites.

Monika Mendlová (322454)
Yves Desdevises (47794)
Kristína Civáňová (322455)
Antoine Pariselle (322456)
Andrea Šimková (74744)

February 2013

Bootstrap percentages for maximum likelihood, maximum parsimony, minimum evolution (above branche...

Phylogenetic tree based on 16S rDNA sequences using the Maximum Likelihood method.

Kyoko Hagino (492755)
Ryo Onuma (492756)
Masanobu Kawachi (492757)
Takeo Horiguchi (492758)

December 2013

Gloeobacter violaceus was used as an out-group. The numbers on each node indicate the boot...

Phylogenetic tree based on 18S rDNA sequences using the Maximum Likelihood method.

Kyoko Hagino (492755)
Ryo Onuma (492756)
Masanobu Kawachi (492757)
Takeo Horiguchi (492758)

December 2013

Representatives of the Pavlovophyceae were used as an out-group. Asterisks refer to the clade nam...

Phylogenetic relationships among 13 strains of three forms of Volvox carteri.

Kaoru Kawafune (182371)
Yuichi Hongoh (182377)
Takashi Hamaji (182380)
Tomoaki Sakamoto (691621)
Tetsuya Kurata (166586)
Shunsuke Hirooka (629734)
Shin-ya Miyagishima (233814)
Hisayoshi Nozaki (78874)

February 2015

The tree was inferred using the maximum-likelihood (ML) method based on alignment of 471 nucleoti...

Phylogenetic positions of Volvox reticuliferus Nozaki sp. nov. and V. africanus G. S. West within the advanced members of the Volvocaceae (Eudorina group [8, 23]), as inferred from 6021 base pairs of five chloroplast genes.

Hisayoshi Nozaki (78874)
Ryo Matsuzaki (222998)
Kayoko Yamamoto (825617)
Masanobu Kawachi (492757)
Fumio Takahashi (502447)

November 2015

The tree was constructed by Bayesian inference unlinked GTR+I+G, F81+I+G and GTR+I+G models for t...

Maximum-likelihood (ML) tree inferred using 16S rRNA sequences.

Rey C. Thomas Jr (507134)
Demian A. Willette (507135)
Kent E. Carpenter (152167)
Mudjekeewis D. Santos (325851)

January 2014

Bootstrap support values were calculated using 1,000 replicates. Sequences of S. hualiensis</i...

Phylogenetic tree based on plastid 16S rDNA sequences using the Maximum Likelihood method.

Kyoko Hagino (492755)
Ryo Onuma (492756)
Masanobu Kawachi (492757)
Takeo Horiguchi (492758)

December 2013

Representatives of the Pavlovophyceae were used as an out-group. The numbers on each node indicat...

Phylogenetic tree on the basis of 16S rRNA gene sequences by neighbor-joining method.

Nurhidayu Al-saari (789006)
Feng Gao (3548)
Amin A.K.M. Rohul (789007)
Kazumichi Sato (789008)
Keisuke Sato (789009)
Sayaka Mino (789010)
Wataru Suda (395421)
Kenshiro Oshima (140130)
Masahira Hattori (2579)
Moriya Ohkuma (116005)
Pedro M. Meirelles (160004)
Fabiano L. Thompson (153990)
Cristiane Thompson (758007)
Gilberto M. A. Filho (789011)
Bruno Gomez-Gil (731401)
Toko Sawabe (789012)
Tomoo Sawabe (627132)

August 2015

Bootstrap values are on 500 replicates. The topology of branch with the bootstrap value was also ...

Maximum likelihood tree for a combined mitochondrial (16S rRNA) and nuclear (Rag1) DNA data set of 1063 bp showing phylogenetic relationships among 16 recognized ranixalid species and one outgroup species.

Sonali Garg (846879)
S. D. Biju (472564)

November 2016

Bayesian Posterior Probabilities and RaxML Bootstrap values >50% are indicated above and below th...

Maximum likelihood (ML) and Bayesian inference (BI) trees based on the partial sequences of the partial SSU rDNA (437 bp) of Blastocystis sp. isolates of the present study.

Carolina Valença Barbosa (4926067)
Magali Muniz Barreto (4926058)
Rosemary de Jesus Andrade (4926076)
Fernando Sodré (4926061)
Claudia Masini d’Avila-Levy (4926064)
José Mauro Peralta (4926070)
Ricardo Pereira Igreja (4926079)
Heloisa Werneck de Macedo (4926055)
Helena Lucia Carneiro Santos (4926073)

March 2018

The high genetic divergence of rDNA gene revealed six clusters (denoted by ST1, 2, 3, 4, 8 and No...

Maximum likelihood (ML) phylogenetic tree of ribosomal gene sequences.

Olga A. Glazunova (5329184)
Natalia V. Shakhova (5329193)
Nadezhda V. Psurtseva (5329187)
Konstantin V. Moiseenko (3842116)
Sergei Y. Kleimenov (5329190)
Tatiana V. Fedorova (3842110)

June 2018

Numbers at nodes are bootstrap percentages from 100 replicates. Fungi from the residual and the c...

Maximum likelihood (ML) tree of <i>Volvox</i> sect. <i>Volvox</i> based on ITS region of nuclear ribosomal DNA (ITS-1, 5.8S rDNA, and ITS-2) (S1 Table).

Abstract

Extracted data

Maximum likelihood (ML) tree of <i>Volvox</i> sect. <i>Volvox</i> based on ITS region of nuclear ribosomal DNA (ITS-1, 5.8S rDNA, and ITS-2) (S1 Table).

Abstract

Extracted data

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