Genetic diversity and LD in each of the four candidate genes.

<p>Different nucleotide diversity was estimated using SNPs within the whole gene, π, nonsynonymous SNP sites, π(nonsyn), synonymous SNP sites, π(syn), and the silent SNP sites including both synonymous and non-coding sites, π(s). The results of haplotype and LD analysis include number of haplotypes (H), haplotype diversities (Hd), the number of haplotypes with proportions higher than 0.05 (H>0.05), mean of pairwise LD (LD mean) and the half LD decay distance (LD decay).