Enrichment of rarer variation in custom content. | ORKG Ask

We use cookies to provide a better user experience.

Data Protection

Related items

Frequencies for minor allele in each study group and International HapMap Project population data.

Gloria Pérez-Rubio (2611231)
Alejandra Ramírez-Venegas (837317)
Valeri Noé Díaz (3684685)
Leonor García Gómez (3684676)
Karina Elvira Fabián (3684667)
Salvador García Carmona (3684688)
Luis A. López-Flores (3684670)
Enrique Ambrocio-Ortiz (3684673)
Rocío Contreras Romero (3684679)
Noé Alcantar-Ayala (3684682)
Raúl H. Sansores (2611261)
Ramcés Falfán-Valencia (837320)

January 2017

<p>Frequencies for minor allele in each study group and International HapMap Project population data...

Allele frequency comparisons between gnomAD and MVP HARE groups for three groups (EUR, AFR, HIS).

Kyriacos Markianos (843612)
Frederic Dong (14675982)
Bryan Gorman (14675985)
Yunling Shi (26242)
Daniel Dochtermann (10284919)
Uma Saxena (14675988)
Poornima Devineni (14675991)
Jennifer Moser (14675994)
Sumitra Muralidhar (174823)
Rachel Ramoni (9628806)
Philip Tsao (3470804)
Saiju Pyarajan (66900)
Ronald Przygodzki (14675997)

February 2023

For all three, correlation with gnomAD allele frequencies is high (R2>0.99). In the lower right we c...

Minor allele frequency for all variants successfully genotyped over all ethnicities.

May 2014

<p>The number of variants is plotted by the minor allele frequency over all ethnicities. These varia...

Distribution of rare variants per gene in Baylor and Broad data sets after filtering.

April 2013

<p>Minor allele counts (MAC) are restricted to variants with minor allele frequency . Panel (A), dis...

Allele frequency distributions of all HapMap SNPs (black), Illumina 1M SNPs (blue), and GWAS associations in CEU (red), and simulated synthetic associations (green).

Samuel P. Dickson (242256)
Kai Wang (21246)
Ian Krantz (264398)
Hakon Hakonarson (102913)
David B. Goldstein (194563)

February 2013

<p>The allele frequencies show both minor and major allele frequencies. GWAS associations have a cle...

Kyriacos Markianos (843612)
Frederic Dong (14675982)
Bryan Gorman (14675985)
Yunling Shi (26242)
Daniel Dochtermann (10284919)
Uma Saxena (14675988)
Poornima Devineni (14675991)
Jennifer Moser (14675994)
Sumitra Muralidhar (174823)
Rachel Ramoni (9628806)
Philip Tsao (3470804)
Saiju Pyarajan (66900)
Ronald Przygodzki (14675997)

February 2023

(a) Allele frequency distributions in different ethnic groups of 282 variants in 153 genes (b) diffe...

Low Frequency Variants, Collapsed Based on Biological Knowledge, Uncover Complexity of Population Stratification in 1000 Genomes Project Data

Carrie B. Moore (501979)
John R. Wallace (235277)
Daniel J. Wolfe (501980)
Alex T. Frase (501981)
Sarah A. Pendergrass (87900)
Kenneth M. Weiss (501982)
Marylyn D. Ritchie (201209)

December 2013

<div><p>Analyses investigating low frequency variants have the potential for explaining additional g...

Exome chip minor allele frequency distribution by race.

Megan L. Grove (433250)
Bing Yu (237109)
Barbara J. Cochran (433251)
Talin Haritunians (262584)
Joshua C. Bis (183182)
Kent D. Taylor (123459)
Mark Hansen (28991)
Ingrid B. Borecki (113678)
L. Adrienne Cupples (113601)
Myriam Fornage (45591)
Vilmundur Gudnason (8873)
Tamara B. Harris (110195)
Sekar Kathiresan (60585)
Robert Kraaij (418732)
Lenore J. Launer (110269)
Daniel Levy (51573)
Yongmei Liu (104713)
Thomas Mosley (115371)
Gina M. Peloso (433252)
Bruce M. Psaty (103721)
Stephen S. Rich (110262)
Fernando Rivadeneira (61551)
David S. Siscovick (174822)
Albert V. Smith (103644)
Andre Uitterlinden (3508127)
Cornelia M. van Duijn (103685)
James G. Wilson (113688)
Christopher J. O’Donnell (110479)
Jerome I. Rotter (103729)
Eric Boerwinkle (36288)

July 2013

<p>The following samples were excluded: all AGES individuals, race unknown or not reported, known re...

Demographic history and rare allele sharing among human populations

January 2011

High-throughput sequencing technology enables population-level surveys of human genomic variation. H...

Frequencies for minor allele in each study group and International HapMap Project population data.

Gloria Pérez-Rubio (2611231)
Alejandra Ramírez-Venegas (837317)
Valeri Noé Díaz (3684685)
Leonor García Gómez (3684676)
Karina Elvira Fabián (3684667)
Salvador García Carmona (3684688)
Luis A. López-Flores (3684670)
Enrique Ambrocio-Ortiz (3684673)
Rocío Contreras Romero (3684679)
Noé Alcantar-Ayala (3684682)
Raúl H. Sansores (2611261)
Ramcés Falfán-Valencia (837320)

January 2017

<p>Frequencies for minor allele in each study group and International HapMap Project population data...

Allele frequency comparisons between gnomAD and MVP HARE groups for three groups (EUR, AFR, HIS).

Kyriacos Markianos (843612)
Frederic Dong (14675982)
Bryan Gorman (14675985)
Yunling Shi (26242)
Daniel Dochtermann (10284919)
Uma Saxena (14675988)
Poornima Devineni (14675991)
Jennifer Moser (14675994)
Sumitra Muralidhar (174823)
Rachel Ramoni (9628806)
Philip Tsao (3470804)
Saiju Pyarajan (66900)
Ronald Przygodzki (14675997)

February 2023

For all three, correlation with gnomAD allele frequencies is high (R2>0.99). In the lower right we c...

Minor allele frequency for all variants successfully genotyped over all ethnicities.

May 2014

<p>The number of variants is plotted by the minor allele frequency over all ethnicities. These varia...

Distribution of rare variants per gene in Baylor and Broad data sets after filtering.

April 2013

<p>Minor allele counts (MAC) are restricted to variants with minor allele frequency . Panel (A), dis...

Allele frequency distributions of all HapMap SNPs (black), Illumina 1M SNPs (blue), and GWAS associations in CEU (red), and simulated synthetic associations (green).

Samuel P. Dickson (242256)
Kai Wang (21246)
Ian Krantz (264398)
Hakon Hakonarson (102913)
David B. Goldstein (194563)

February 2013

<p>The allele frequencies show both minor and major allele frequencies. GWAS associations have a cle...

Kyriacos Markianos (843612)
Frederic Dong (14675982)
Bryan Gorman (14675985)
Yunling Shi (26242)
Daniel Dochtermann (10284919)
Uma Saxena (14675988)
Poornima Devineni (14675991)
Jennifer Moser (14675994)
Sumitra Muralidhar (174823)
Rachel Ramoni (9628806)
Philip Tsao (3470804)
Saiju Pyarajan (66900)
Ronald Przygodzki (14675997)

February 2023

(a) Allele frequency distributions in different ethnic groups of 282 variants in 153 genes (b) diffe...

Low Frequency Variants, Collapsed Based on Biological Knowledge, Uncover Complexity of Population Stratification in 1000 Genomes Project Data

Carrie B. Moore (501979)
John R. Wallace (235277)
Daniel J. Wolfe (501980)
Alex T. Frase (501981)
Sarah A. Pendergrass (87900)
Kenneth M. Weiss (501982)
Marylyn D. Ritchie (201209)

December 2013

<div><p>Analyses investigating low frequency variants have the potential for explaining additional g...

Exome chip minor allele frequency distribution by race.

Megan L. Grove (433250)
Bing Yu (237109)
Barbara J. Cochran (433251)
Talin Haritunians (262584)
Joshua C. Bis (183182)
Kent D. Taylor (123459)
Mark Hansen (28991)
Ingrid B. Borecki (113678)
L. Adrienne Cupples (113601)
Myriam Fornage (45591)
Vilmundur Gudnason (8873)
Tamara B. Harris (110195)
Sekar Kathiresan (60585)
Robert Kraaij (418732)
Lenore J. Launer (110269)
Daniel Levy (51573)
Yongmei Liu (104713)
Thomas Mosley (115371)
Gina M. Peloso (433252)
Bruce M. Psaty (103721)
Stephen S. Rich (110262)
Fernando Rivadeneira (61551)
David S. Siscovick (174822)
Albert V. Smith (103644)
Andre Uitterlinden (3508127)
Cornelia M. van Duijn (103685)
James G. Wilson (113688)
Christopher J. O’Donnell (110479)
Jerome I. Rotter (103729)
Eric Boerwinkle (36288)

July 2013

<p>The following samples were excluded: all AGES individuals, race unknown or not reported, known re...

Demographic history and rare allele sharing among human populations

January 2011

High-throughput sequencing technology enables population-level surveys of human genomic variation. H...

Frequencies for minor allele in each study group and International HapMap Project population data.

Gloria Pérez-Rubio (2611231)
Alejandra Ramírez-Venegas (837317)
Valeri Noé Díaz (3684685)
Leonor García Gómez (3684676)
Karina Elvira Fabián (3684667)
Salvador García Carmona (3684688)
Luis A. López-Flores (3684670)
Enrique Ambrocio-Ortiz (3684673)
Rocío Contreras Romero (3684679)
Noé Alcantar-Ayala (3684682)
Raúl H. Sansores (2611261)
Ramcés Falfán-Valencia (837320)

January 2017

<p>Frequencies for minor allele in each study group and International HapMap Project population data...

Allele frequency comparisons between gnomAD and MVP HARE groups for three groups (EUR, AFR, HIS).

Kyriacos Markianos (843612)
Frederic Dong (14675982)
Bryan Gorman (14675985)
Yunling Shi (26242)
Daniel Dochtermann (10284919)
Uma Saxena (14675988)
Poornima Devineni (14675991)
Jennifer Moser (14675994)
Sumitra Muralidhar (174823)
Rachel Ramoni (9628806)
Philip Tsao (3470804)
Saiju Pyarajan (66900)
Ronald Przygodzki (14675997)

February 2023

For all three, correlation with gnomAD allele frequencies is high (R2>0.99). In the lower right we c...