<p>Co-binding (left) and enrichment of transcription factor binding sites (right) in chromatin states (GenoSTAN-Poilog-K562) for 101 transcription factors in K562 reveals TF regulatory modules with distinct binding preferences for promoters, enhancers and repressed regions. The co-binding is depicted as the frequency of binding sites of two TFs that co-occur in a chromatin state divided by the number of all binding sites of the two TFs (Jaccard index). For each TF, enrichments were normalized to sum up to 1 across all 18 chromatin states of GenoSTAN-Poilog-dataset 1.</p
Transcriptional regulation is mediated by a battery of transcription factor (TF) proteins, that form...
<p>Many concerted changes in regulatory mechanisms across genotypes can be linked to a sequence chan...
sequence elements, DNA-bound proteins, and nucleo-somes; secondary structure, comprising interaction...
Gene expression is controlled by sequence-specific transcription factors (TFs), which bind to regula...
<p>A) Emission states of chromatin structure from ChromHMM. Darker blues correspond to higher percen...
<div><p>One goal of human genetics is to understand how the information for precise and dynamic gene...
<p>The 9 TFs whose binding site profiles were significantly enriched in the 13 genes described in Ta...
Background Transcription factors (TFs) bind specifically to TF binding sites (TFBSs)...
International audienceMammalian transcription factors (TFs) are often involved in differential cell-...
Linking cooperatively functioning cis-regulatory elements (CREs), specifically enhancers and promote...
The binding to DNA of sequence-specific Transcription Factors -TFs- controls the deposition of histo...
Thesis: Ph. D., Massachusetts Institute of Technology, Department of Biology, 2019Cataloged from PDF...
Background—The computational identification of functional transcription factor binding sites (TFBSs)...
19 pagesInternational audienceBackgroundIn eukaryotic cells, transcription factors (TFs) are thought...
Statistical models have been used to quantify the relationship between gene expression and transcrip...
Transcriptional regulation is mediated by a battery of transcription factor (TF) proteins, that form...
<p>Many concerted changes in regulatory mechanisms across genotypes can be linked to a sequence chan...
sequence elements, DNA-bound proteins, and nucleo-somes; secondary structure, comprising interaction...
Gene expression is controlled by sequence-specific transcription factors (TFs), which bind to regula...
<p>A) Emission states of chromatin structure from ChromHMM. Darker blues correspond to higher percen...
<div><p>One goal of human genetics is to understand how the information for precise and dynamic gene...
<p>The 9 TFs whose binding site profiles were significantly enriched in the 13 genes described in Ta...
Background Transcription factors (TFs) bind specifically to TF binding sites (TFBSs)...
International audienceMammalian transcription factors (TFs) are often involved in differential cell-...
Linking cooperatively functioning cis-regulatory elements (CREs), specifically enhancers and promote...
The binding to DNA of sequence-specific Transcription Factors -TFs- controls the deposition of histo...
Thesis: Ph. D., Massachusetts Institute of Technology, Department of Biology, 2019Cataloged from PDF...
Background—The computational identification of functional transcription factor binding sites (TFBSs)...
19 pagesInternational audienceBackgroundIn eukaryotic cells, transcription factors (TFs) are thought...
Statistical models have been used to quantify the relationship between gene expression and transcrip...
Transcriptional regulation is mediated by a battery of transcription factor (TF) proteins, that form...
<p>Many concerted changes in regulatory mechanisms across genotypes can be linked to a sequence chan...
sequence elements, DNA-bound proteins, and nucleo-somes; secondary structure, comprising interaction...