The precision-recall (PR) and receiver operating characteristic (ROC) curves of BWERF and GENIE3 for three mouse microarray data sets.

<p>The 24 stem cell pluripotency maintenance genes regulated by the 35 transcription factors (TFs) were obtained from mouse ChIP-seq data. A microarray data set of these pathway genes and TFs yielded from a time course in which the pluripotent cells were subjected to undirected differentiation were downloaded from ESCAPE web portal (<a href="http://www.maayanlab.net/ESCAPE/" target="_blank">http://www.maayanlab.net/ESCAPE/</a>). The three data sets were generated by adding the profiles of 100, 200, and 300 noise variables to the profiles of 35 TF genes for <i>in silico</i> experimental validation.