MOESM13 of Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments
- Paul Daly (3725233)
- Jolanda Munster (3725230)
- Martin Blythe (849087)
- Roger Ibbett (144605)
- Matt Kokolski (3725242)
- Sanyasi Gaddipati (144602)
- Erika Lindquist (116964)
- Vasanth Singan (3725236)
- Kerrie Barry (276529)
- Anna Lipzen (194340)
- Chew Ngan (3505151)
- Christopher Petzold (3725245)
- Leanne Chan (3725248)
- Steven Pullan (3404558)
- StĂŠphane Delmas (3725254)
- Paul Waldron (3725239)
- Igor Grigoriev (760696)
- Gregory Tucker (3725251)
- Blake Simmons (222815)
- David Archer (203725)
Publication date
February 2017
DOIAbstract
Additional file 13: Table S10. CAZy, transcription factor and sugar transporter content of MFuzz clusters from the ILS time-course. File with lists of genes from each cluster from the ILS time-course of all genes from the categories of CAZy, Pfam for sugar transporters and Pfam for transcription factors that met selection criteria. Only genes strongly associated with a clusterâs predominant expression profile (membership value > 0.5 as well as an FPKM > 10 at the clusterâs expression peak) were selected which led to the capture of between a half and a third of each category
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