Additional file 3: Table S1. of The landscape of sex-differential transcriptome and its consequent selection in human adults

Additional file 8: of CHESS: a new human gene catalog curated from thousands of large-scale RNA sequencing experiments reveals extensive transcriptional noise

Mihaela Pertea (48226)
Alaina Shumate (6021230)
Geo Pertea (1207)
Ales Varabyou (6021236)
Florian Breitwieser (6021242)
Yu-Chi Chang (843345)
Anil Madugundu (3561350)
Akhilesh Pandey (14293)
Steven Salzberg (3264042)

November 2018

Novel protein-coding and lncRNA genes in CHESS that are differentially expressed between males and f...

Additional file 3: Table S3. of Large-scale transcriptome sequencing reveals novel expression patterns for key sex-related genes in a sex-changing fish

Hui Liu (33624)
Melissa Lamm (3553643)
Kim Rutherford (45266)
Michael Black (246211)
John Godwin (211226)
Neil Gemmell (279711)

November 2015

Results of differential expression analysis for the brain (blue: male-biased contigs, red: female-bi...

Additional file 5: of Differential isoform expression and alternative splicing in sex determination in mice

Benjamín Planells (6468077)
Isabel Gómez-Redondo (6468080)
Eva Pericuesta (353735)
Patrick Lonergan (476829)
Alfonso Gutiérrez-Adán (5658823)

March 2019

Heat map of differentially expressed genes in the gonads of males and females at E11 that are downre...

Additional file 15: Table S6. of The landscape of sex-differential transcriptome and its consequent selection in human adults

Moran Gershoni (3725329)
Shmuel Pietrokovski (10189)

February 2017

SDE scores for testis overexpressed protein-coding genes across 53 tissues. Values below or above ze...

Additional file 20: Figure S12. of The landscape of sex-differential transcriptome and its consequent selection in human adults

Moran Gershoni (3725329)
Shmuel Pietrokovski (10189)

February 2017

SDE score heatmap of non-protein-coding genes. Red and blue denote women or men specificity, respect...

Additional file 8 of The landscape of sex-differential transcriptome and its consequent selection in human adults

Moran Gershoni (3725329)
Shmuel Pietrokovski (10189)

February 2017

Figure S6. The first two components of principle component analysis of all protein-coding genes with...

Additional file 1: Table S1. of Spatial sexual dimorphism of X and Y homolog gene expression in the human central nervous system during early male development

Martin Johansson (211193)
Elin Lundin (3428459)
Xiaoyan Qian (1572298)
Mohammadreza Mirzazadeh (3428456)
Jonatan Halvardson (3428462)
Elisabeth Darj (736066)
Lars Feuk (60288)
Mats Nilsson (7964)
Elena Jazin (31066)

January 2016

RNA sequencing results for all genes belonging to protocadherin and neuroligin families. The table s...

Additional file 3: of Differential isoform expression and alternative splicing in sex determination in mice

Benjamín Planells (6468077)
Isabel Gómez-Redondo (6468080)
Eva Pericuesta (353735)
Patrick Lonergan (476829)
Alfonso Gutiérrez-Adán (5658823)

March 2019

Differentially expressed genes in males vs females at E11 (A), E12 (B) and at E11 vs E12 in males (C...

Additional file 9: Figure S7. of The landscape of sex-differential transcriptome and its consequent selection in human adults

Moran Gershoni (3725329)
Shmuel Pietrokovski (10189)

February 2017

Expression of TSHB and MUCL1 genes in 53 human tissues. Box-plots of women samples are in red and me...

Additional file 10: of Differential isoform expression and alternative splicing in sex determination in mice

Benjamín Planells (6468077)
Isabel Gómez-Redondo (6468080)
Eva Pericuesta (353735)
Patrick Lonergan (476829)
Alfonso Gutiérrez-Adán (5658823)

March 2019

Relative contributions of transcriptional activation and repression to sexually dimorphic DEGs and D...

Additional file 2 of Limited evidence for blood eQTLs in human sexual dimorphism

Völker, Uwe
Teumer, Alexander
Weihs, Antoine
Santoni, Federico A.
Reymond, Alexandre
Franke, Lude
Porcu, Eleonora
Lepik, Kaido
Kutalik, Zoltán
Claringbould, Annique
Richardson, Tom G.
Stem Cell Aging Leukemia and Lymphoma (SALL)
Groningen Institute for Gastro Intestinal Genetics and Immunology (3GI)
University Medicine Greifswald
Swiss Institute of Bioinformatics

January 2022

Additional file 2: Table S1. Sex-specific eQTLs. Table S2. Summary statistics for eQTLs in binding s...

Additional file 1: of Differential isoform expression and alternative splicing in sex determination in mice

Benjamín Planells (6468077)
Isabel Gómez-Redondo (6468080)
Eva Pericuesta (353735)
Patrick Lonergan (476829)
Alfonso Gutiérrez-Adán (5658823)

March 2019

(A) Summary of RNA sample, RNA-seq data, and number of genes and transcripts detected. (B) Summary o...

Additional file 12: Figure S9. of The landscape of sex-differential transcriptome and its consequent selection in human adults

Moran Gershoni (3725329)
Shmuel Pietrokovski (10189)

February 2017

Sex-biased expression of the MTRNR2L2 gene. MTRNR2L2 is notably expressed in women substantia-nigra ...

Additional file 19: of Differential isoform expression and alternative splicing in sex determination in mice

Benjamín Planells (6468077)
Isabel Gómez-Redondo (6468080)
Eva Pericuesta (353735)
Patrick Lonergan (476829)
Alfonso Gutiérrez-Adán (5658823)

March 2019

Comparison of DEGs with the data of Zhao et al. (A) List of DEGs found in our study. (B) List of DEG...

Sex differences in the human peripheral blood transcriptome

Jansen, R.
Batista, S.
Brooks, A.I.
Tischfield, J.A.
Willemsen, G.
Grootheest, G. van
Hottenga, J.J.
Milaneschi, Y.
Mbarek, H.
Madar, V.
Peyrot, W.J.
Vink, J.M.
Verweij, C.L.
Geus, E.J.C. de
Smit, J.H.
Wright, F.A.
Sullivan, P.F.
Boomsma, D.I.
Penninx, B.W.J.H.

January 2014

Contains fulltext : 160008.pdf (publisher's version ) (Open Access)Background: Gen...

Additional file 8: of CHESS: a new human gene catalog curated from thousands of large-scale RNA sequencing experiments reveals extensive transcriptional noise

Mihaela Pertea (48226)
Alaina Shumate (6021230)
Geo Pertea (1207)
Ales Varabyou (6021236)
Florian Breitwieser (6021242)
Yu-Chi Chang (843345)
Anil Madugundu (3561350)
Akhilesh Pandey (14293)
Steven Salzberg (3264042)

November 2018

Novel protein-coding and lncRNA genes in CHESS that are differentially expressed between males and f...

Additional file 3: Table S3. of Large-scale transcriptome sequencing reveals novel expression patterns for key sex-related genes in a sex-changing fish

Hui Liu (33624)
Melissa Lamm (3553643)
Kim Rutherford (45266)
Michael Black (246211)
John Godwin (211226)
Neil Gemmell (279711)

November 2015

Results of differential expression analysis for the brain (blue: male-biased contigs, red: female-bi...

Additional file 5: of Differential isoform expression and alternative splicing in sex determination in mice

Benjamín Planells (6468077)
Isabel Gómez-Redondo (6468080)
Eva Pericuesta (353735)
Patrick Lonergan (476829)
Alfonso Gutiérrez-Adán (5658823)

March 2019

Heat map of differentially expressed genes in the gonads of males and females at E11 that are downre...

Additional file 15: Table S6. of The landscape of sex-differential transcriptome and its consequent selection in human adults

Moran Gershoni (3725329)
Shmuel Pietrokovski (10189)

February 2017

SDE scores for testis overexpressed protein-coding genes across 53 tissues. Values below or above ze...

Additional file 20: Figure S12. of The landscape of sex-differential transcriptome and its consequent selection in human adults

Moran Gershoni (3725329)
Shmuel Pietrokovski (10189)

February 2017

SDE score heatmap of non-protein-coding genes. Red and blue denote women or men specificity, respect...

Additional file 8 of The landscape of sex-differential transcriptome and its consequent selection in human adults

Moran Gershoni (3725329)
Shmuel Pietrokovski (10189)

February 2017

Figure S6. The first two components of principle component analysis of all protein-coding genes with...

Additional file 1: Table S1. of Spatial sexual dimorphism of X and Y homolog gene expression in the human central nervous system during early male development

Martin Johansson (211193)
Elin Lundin (3428459)
Xiaoyan Qian (1572298)
Mohammadreza Mirzazadeh (3428456)
Jonatan Halvardson (3428462)
Elisabeth Darj (736066)
Lars Feuk (60288)
Mats Nilsson (7964)
Elena Jazin (31066)

January 2016

RNA sequencing results for all genes belonging to protocadherin and neuroligin families. The table s...

Additional file 3: of Differential isoform expression and alternative splicing in sex determination in mice

Benjamín Planells (6468077)
Isabel Gómez-Redondo (6468080)
Eva Pericuesta (353735)
Patrick Lonergan (476829)
Alfonso Gutiérrez-Adán (5658823)

March 2019

Differentially expressed genes in males vs females at E11 (A), E12 (B) and at E11 vs E12 in males (C...

Additional file 9: Figure S7. of The landscape of sex-differential transcriptome and its consequent selection in human adults

Moran Gershoni (3725329)
Shmuel Pietrokovski (10189)

February 2017

Expression of TSHB and MUCL1 genes in 53 human tissues. Box-plots of women samples are in red and me...

Additional file 10: of Differential isoform expression and alternative splicing in sex determination in mice

Benjamín Planells (6468077)
Isabel Gómez-Redondo (6468080)
Eva Pericuesta (353735)
Patrick Lonergan (476829)
Alfonso Gutiérrez-Adán (5658823)

March 2019

Relative contributions of transcriptional activation and repression to sexually dimorphic DEGs and D...

Additional file 2 of Limited evidence for blood eQTLs in human sexual dimorphism

Völker, Uwe
Teumer, Alexander
Weihs, Antoine
Santoni, Federico A.
Reymond, Alexandre
Franke, Lude
Porcu, Eleonora
Lepik, Kaido
Kutalik, Zoltán
Claringbould, Annique
Richardson, Tom G.
Stem Cell Aging Leukemia and Lymphoma (SALL)
Groningen Institute for Gastro Intestinal Genetics and Immunology (3GI)
University Medicine Greifswald
Swiss Institute of Bioinformatics

January 2022

Additional file 2: Table S1. Sex-specific eQTLs. Table S2. Summary statistics for eQTLs in binding s...

Additional file 1: of Differential isoform expression and alternative splicing in sex determination in mice

Benjamín Planells (6468077)
Isabel Gómez-Redondo (6468080)
Eva Pericuesta (353735)
Patrick Lonergan (476829)
Alfonso Gutiérrez-Adán (5658823)

March 2019

(A) Summary of RNA sample, RNA-seq data, and number of genes and transcripts detected. (B) Summary o...

Additional file 12: Figure S9. of The landscape of sex-differential transcriptome and its consequent selection in human adults

Moran Gershoni (3725329)
Shmuel Pietrokovski (10189)

February 2017

Sex-biased expression of the MTRNR2L2 gene. MTRNR2L2 is notably expressed in women substantia-nigra ...

Additional file 19: of Differential isoform expression and alternative splicing in sex determination in mice

Benjamín Planells (6468077)
Isabel Gómez-Redondo (6468080)
Eva Pericuesta (353735)
Patrick Lonergan (476829)
Alfonso Gutiérrez-Adán (5658823)

March 2019

Comparison of DEGs with the data of Zhao et al. (A) List of DEGs found in our study. (B) List of DEG...

Sex differences in the human peripheral blood transcriptome

Jansen, R.
Batista, S.
Brooks, A.I.
Tischfield, J.A.
Willemsen, G.
Grootheest, G. van
Hottenga, J.J.
Milaneschi, Y.
Mbarek, H.
Madar, V.
Peyrot, W.J.
Vink, J.M.
Verweij, C.L.
Geus, E.J.C. de
Smit, J.H.
Wright, F.A.
Sullivan, P.F.
Boomsma, D.I.
Penninx, B.W.J.H.

January 2014

Contains fulltext : 160008.pdf (publisher's version ) (Open Access)Background: Gen...

Additional file 8: of CHESS: a new human gene catalog curated from thousands of large-scale RNA sequencing experiments reveals extensive transcriptional noise

Mihaela Pertea (48226)
Alaina Shumate (6021230)
Geo Pertea (1207)
Ales Varabyou (6021236)
Florian Breitwieser (6021242)
Yu-Chi Chang (843345)
Anil Madugundu (3561350)
Akhilesh Pandey (14293)
Steven Salzberg (3264042)

November 2018

Novel protein-coding and lncRNA genes in CHESS that are differentially expressed between males and f...

Additional file 3: Table S3. of Large-scale transcriptome sequencing reveals novel expression patterns for key sex-related genes in a sex-changing fish

Hui Liu (33624)
Melissa Lamm (3553643)
Kim Rutherford (45266)
Michael Black (246211)
John Godwin (211226)
Neil Gemmell (279711)

November 2015

Results of differential expression analysis for the brain (blue: male-biased contigs, red: female-bi...

Additional file 5: of Differential isoform expression and alternative splicing in sex determination in mice

Benjamín Planells (6468077)
Isabel Gómez-Redondo (6468080)
Eva Pericuesta (353735)
Patrick Lonergan (476829)
Alfonso Gutiérrez-Adán (5658823)

March 2019

Heat map of differentially expressed genes in the gonads of males and females at E11 that are downre...

Additional file 3: Table S1. of The landscape of sex-differential transcriptome and its consequent selection in human adults

Abstract

Extracted data

Additional file 3: Table S1. of The landscape of sex-differential transcriptome and its consequent selection in human adults

Abstract

Extracted data

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