MOESM1 of Optimized creation of glioblastoma patient derived xenografts for use in preclinical studies

MOESM1 of Temozolomide promotes genomic and phenotypic changes in glioblastoma cells

Aleksei Stepanenko (3480140)
Svitlana Andreieva (3480137)
Kateryna Korets (3480149)
Dmytro Mykytenko (3480143)
Vladimir Baklaushev (3480128)
Nataliya Huleyuk (3480125)
Oksana Kovalova (3480134)
Kateryna Kotsarenko (3480131)
Vladimir Chekhonin (3457331)
Yegor Vassetzky (104268)
Stanislav Avdieiev (3480122)
Vladimir Dmitrenko (3480146)

May 2016

Additional file 1: Table S1. A list of CCAs/NCCAs and their copy number variation in U251, U251TMZ1 ...

Patient-Specific Orthotopic Glioblastoma Xenograft Models Recapitulate the Histopathology and Biology of Human Glioblastomas In Situ

Kyeung Min Joo
Jinkuk Kim
Juyoun Jin
Misuk Kim
Ho Jun Seol
Johongir Muradov
Heekyoung Yang
Yoon-La Choi
Woong-Yang Park
Doo-Sik Kong
Jung-Il Lee
Young-Hyeh Ko
Hyun Goo Woo
Jeongwu Lee
Sunghoon Kim
Do-Hyun Nam

January 2013

Frequent discrepancies between preclinical and clinical results of anticancer agents demand a reliab...

Patient-Specific Orthotopic Glioblastoma Xenograft Models Recapitulate the Histopathology and Biology of Human Glioblastomas In Situ

Joo, Kyeung Min
Kim, Jinkuk
Jin, Juyoun
Kim, Misuk
Seol, Ho Jun
Muradov, Johongir
Yang, Heekyoung
Choi, Yoon-La
Park, Woong-Yang
Kong, Doo-Sik
Lee, Jung-Il
Ko, Young-Hyeh
Woo, Hyun Goo
Lee, Jeongwu
Kim, Sunghoon
Nam, Do-Hyun

January 2013

SummaryFrequent discrepancies between preclinical and clinical results of anticancer agents demand a...

MOESM3 of Optimized creation of glioblastoma patient derived xenografts for use in preclinical studies

Doreen William (3739075)
Christina Mullins (3501902)
Bjรถrn Schneider (3739210)
Andrea Orthmann (3739078)
Nora Lamp (3739072)
Mathias Krohn (443089)
Annika Hoffmann (3739069)
Carl-Friedrich Classen (3501905)
Michael Linnebacher (180341)

February 2017

Additional file 3. Overview of highest in vivo passages of engrafted samples. Given numbers indicate...

MOESM1 of Genomic profiling of a Hepatocyte growth factor-dependent signature for MET-targeted therapy in glioblastoma

Jennifer Johnson (3506621)
Maria Ascierto (3506624)
Sandeep Mittal (3398807)
David Newsome (1577362)
Liang Kang (3506630)
Michael Briggs (1988821)
Kirk Tanner (3506627)
Francesco Marincola (3441314)
Michael Berens (240965)
George Vande Woude (3506633)
Qian Xie (43047)

September 2015

Additional file 1: Supplementary data including Supplementary Methods, 1 Supplementary Table, 4 Supp...

MOESM1 of Patient-derived tumor immune microenvironments in patient-derived xenografts of lung cancer

Xingxiang Pu (663654)
Ran Zhang (117374)
Li Wang (15202)
Yungchang Chen (6010931)
Yi Xu (131145)
Apar Pataer (184395)
Ismail Meraz (6010934)
Xiaoshan Zhang (1411513)
Shuhong Wu (192478)
Lin Wu (153444)
Dan Su (8007)
Weimin Mao (550414)
John Heymach (5343626)
Jack Roth (3258858)
Stephen Swisher (5343632)
Bingliang Fang (184412)

November 2018

Additional file 1: Table S1. Clinical information of PDXs used for TIL studies. Table S2. Clinical i...

MOESM1 of Implementing a comprehensive translational oncology platform: from molecular testing to actionability

Zahi Mitri (6087965)
Swapnil Parmar (6087968)
Brett Johnson (6087971)
Annette Kolodzie (6087974)
Jamie Keck (6087977)
Max Morris (6087980)
Alexander Guimaraes (6087983)
Brooke Beckett (3811360)
Uma Borate (6087986)
Charles Lopez (6087989)
Kathleen Kemmer (6087992)
Joshi Alumkal (414129)
Tomasz Beer (6087995)
Christopher Corless (3517934)
Gordon Mills (499661)
Joe Gray (94862)
Raymond Bergan (3847795)

December 2018

Additional file 1: Figure S1. GeneTrails comprehensive solid tumor panel. Table S1. List of Genomic ...

MOESM10 of A cancer cell-line titration series for evaluating somatic classification

Robert Denroche (3436172)
Laura Mullen (3436166)
Lee Timms (522705)
Timothy Beck (3436175)
Christina Yung (3436169)
Lincoln Stein (14330)
John McPherson (545720)
Andrew Brown (126751)

December 2015

Additional file 10. This word document contains descriptions and additional information regarding th...

Translational validation of personalized treatment strategy based on genetic characteristics of glioblastoma.

Young Taek Oh
Hee Jin Cho
Jinkuk Kim
Ji-Hyun Lee
Kyoohyoung Rho
Yun-Jee Seo
Yeon-Sook Choi
Hye Jin Jung
Hyeon Suk Song
Doo-Sik Kong
Ho Jun Seol
Jung-Il Lee
Yeup Yoon
Sunghoon Kim
Do-Hyun Nam
Kyeung Min Joo

Glioblastoma (GBM) heterogeneity in the genomic and phenotypic properties has potentiated personaliz...

MOESM1 of Systematic optimization of gene expression of pentose phosphate pathway enhances ethanol production from a glucose/xylose mixed medium in a recombinant Saccharomyces cerevisiae

Yosuke Kobayashi (732078)
Takehiko Sahara (2288269)
Satoru Ohgiya (2288272)
Yoichi Kamagata (118297)
Kazuhiro Fujimori (5688779)

August 2018

Additional file 1: Table S1. Oligonucleotide sequences used for synthesis of DNA fragments for homol...

MOESM2 of Biopsy vs. extensive resection for first recurrence of glioblastoma: is a prospective clinical trial warranted?

Christopher Dardis (3479804)
Lynn Ashby (3479798)
William Shapiro (3479801)
Nader Sanai (3479807)

September 2015

Additional file 2. LaTeX code used to generate the BERG trial protocol. This is provided so that oth...

MOESM1 of Spatial profiles of markers of glycolysis, mitochondria, and proton pumps in a rat glioma suggest coordinated programming for proliferation

Emmanuelle Grillon (229141)
RĂŠgine Farion (3537914)
Moshe Reuveni (811290)
Andrew Glidle (1311573)
Chantal RĂŠmy (3537917)
Jonathan Coles (222149)

June 2015

Additional file 1: Numerical tabulation of profiles of Tom20 and GAPDH after normalization and align...

Patient-derived glioblastoma cultures as a tool for small-molecule drug discovery

Lin, Fallon
Stockwell, Brent
deCarvalho, Ana
Ye, Ling
Yang, Guizhi
Pagliarini, Raymond
Malesky, Kimberly
Gao, Hui
Korn, Joshua

January 2020

There is a compelling need for new therapeutic strategies for glioblastoma multiforme (GBM). Preclin...

MOESM1 of Personalized treatment based on mini patient-derived xenografts and WES/RNA sequencing in a patient with metastatic duodenal adenocarcinoma

Peng Zhao (128233)
Hui Chen (28597)
Danyi Wen (508019)
Shuo Mou (5681804)
Feifei Zhang (105135)
Shusen Zheng (187083)

August 2018

Additional file 1: Table S1. Quality control metrics of targeted sequencing data. Table S2. Quality ...

MOESM1 of Xenograft tumors derived from malignant pleural effusion of the patients with non-small-cell lung cancer as models to explore drug resistance

Yunhua Xu (1794451)
Feifei Zhang (105135)
Xiaoqing Pan (202756)
Guan Wang (109695)
Lei Zhu (16642)
Jie Zhang (64655)
Danyi Wen (508019)
Shun Lu (402894)

May 2018

Additional file 1: Table S1. Summary of whole exome sequencing data quality control for patient-deri...

MOESM1 of Temozolomide promotes genomic and phenotypic changes in glioblastoma cells

Aleksei Stepanenko (3480140)
Svitlana Andreieva (3480137)
Kateryna Korets (3480149)
Dmytro Mykytenko (3480143)
Vladimir Baklaushev (3480128)
Nataliya Huleyuk (3480125)
Oksana Kovalova (3480134)
Kateryna Kotsarenko (3480131)
Vladimir Chekhonin (3457331)
Yegor Vassetzky (104268)
Stanislav Avdieiev (3480122)
Vladimir Dmitrenko (3480146)

May 2016

Additional file 1: Table S1. A list of CCAs/NCCAs and their copy number variation in U251, U251TMZ1 ...

Patient-Specific Orthotopic Glioblastoma Xenograft Models Recapitulate the Histopathology and Biology of Human Glioblastomas In Situ

Kyeung Min Joo
Jinkuk Kim
Juyoun Jin
Misuk Kim
Ho Jun Seol
Johongir Muradov
Heekyoung Yang
Yoon-La Choi
Woong-Yang Park
Doo-Sik Kong
Jung-Il Lee
Young-Hyeh Ko
Hyun Goo Woo
Jeongwu Lee
Sunghoon Kim
Do-Hyun Nam

January 2013

Frequent discrepancies between preclinical and clinical results of anticancer agents demand a reliab...

Patient-Specific Orthotopic Glioblastoma Xenograft Models Recapitulate the Histopathology and Biology of Human Glioblastomas In Situ

Joo, Kyeung Min
Kim, Jinkuk
Jin, Juyoun
Kim, Misuk
Seol, Ho Jun
Muradov, Johongir
Yang, Heekyoung
Choi, Yoon-La
Park, Woong-Yang
Kong, Doo-Sik
Lee, Jung-Il
Ko, Young-Hyeh
Woo, Hyun Goo
Lee, Jeongwu
Kim, Sunghoon
Nam, Do-Hyun

January 2013

SummaryFrequent discrepancies between preclinical and clinical results of anticancer agents demand a...

MOESM3 of Optimized creation of glioblastoma patient derived xenografts for use in preclinical studies

Doreen William (3739075)
Christina Mullins (3501902)
Bjรถrn Schneider (3739210)
Andrea Orthmann (3739078)
Nora Lamp (3739072)
Mathias Krohn (443089)
Annika Hoffmann (3739069)
Carl-Friedrich Classen (3501905)
Michael Linnebacher (180341)

February 2017

Additional file 3. Overview of highest in vivo passages of engrafted samples. Given numbers indicate...

MOESM1 of Genomic profiling of a Hepatocyte growth factor-dependent signature for MET-targeted therapy in glioblastoma

Jennifer Johnson (3506621)
Maria Ascierto (3506624)
Sandeep Mittal (3398807)
David Newsome (1577362)
Liang Kang (3506630)
Michael Briggs (1988821)
Kirk Tanner (3506627)
Francesco Marincola (3441314)
Michael Berens (240965)
George Vande Woude (3506633)
Qian Xie (43047)

September 2015

Additional file 1: Supplementary data including Supplementary Methods, 1 Supplementary Table, 4 Supp...

MOESM1 of Patient-derived tumor immune microenvironments in patient-derived xenografts of lung cancer

Xingxiang Pu (663654)
Ran Zhang (117374)
Li Wang (15202)
Yungchang Chen (6010931)
Yi Xu (131145)
Apar Pataer (184395)
Ismail Meraz (6010934)
Xiaoshan Zhang (1411513)
Shuhong Wu (192478)
Lin Wu (153444)
Dan Su (8007)
Weimin Mao (550414)
John Heymach (5343626)
Jack Roth (3258858)
Stephen Swisher (5343632)
Bingliang Fang (184412)

November 2018

Additional file 1: Table S1. Clinical information of PDXs used for TIL studies. Table S2. Clinical i...

MOESM1 of Implementing a comprehensive translational oncology platform: from molecular testing to actionability

Zahi Mitri (6087965)
Swapnil Parmar (6087968)
Brett Johnson (6087971)
Annette Kolodzie (6087974)
Jamie Keck (6087977)
Max Morris (6087980)
Alexander Guimaraes (6087983)
Brooke Beckett (3811360)
Uma Borate (6087986)
Charles Lopez (6087989)
Kathleen Kemmer (6087992)
Joshi Alumkal (414129)
Tomasz Beer (6087995)
Christopher Corless (3517934)
Gordon Mills (499661)
Joe Gray (94862)
Raymond Bergan (3847795)

December 2018

Additional file 1: Figure S1. GeneTrails comprehensive solid tumor panel. Table S1. List of Genomic ...

MOESM10 of A cancer cell-line titration series for evaluating somatic classification

Robert Denroche (3436172)
Laura Mullen (3436166)
Lee Timms (522705)
Timothy Beck (3436175)
Christina Yung (3436169)
Lincoln Stein (14330)
John McPherson (545720)
Andrew Brown (126751)

December 2015

Additional file 10. This word document contains descriptions and additional information regarding th...

Translational validation of personalized treatment strategy based on genetic characteristics of glioblastoma.

Young Taek Oh
Hee Jin Cho
Jinkuk Kim
Ji-Hyun Lee
Kyoohyoung Rho
Yun-Jee Seo
Yeon-Sook Choi
Hye Jin Jung
Hyeon Suk Song
Doo-Sik Kong
Ho Jun Seol
Jung-Il Lee
Yeup Yoon
Sunghoon Kim
Do-Hyun Nam
Kyeung Min Joo

Glioblastoma (GBM) heterogeneity in the genomic and phenotypic properties has potentiated personaliz...

MOESM1 of Systematic optimization of gene expression of pentose phosphate pathway enhances ethanol production from a glucose/xylose mixed medium in a recombinant Saccharomyces cerevisiae

Yosuke Kobayashi (732078)
Takehiko Sahara (2288269)
Satoru Ohgiya (2288272)
Yoichi Kamagata (118297)
Kazuhiro Fujimori (5688779)

August 2018

Additional file 1: Table S1. Oligonucleotide sequences used for synthesis of DNA fragments for homol...

MOESM2 of Biopsy vs. extensive resection for first recurrence of glioblastoma: is a prospective clinical trial warranted?

Christopher Dardis (3479804)
Lynn Ashby (3479798)
William Shapiro (3479801)
Nader Sanai (3479807)

September 2015

Additional file 2. LaTeX code used to generate the BERG trial protocol. This is provided so that oth...

MOESM1 of Spatial profiles of markers of glycolysis, mitochondria, and proton pumps in a rat glioma suggest coordinated programming for proliferation

Emmanuelle Grillon (229141)
RĂŠgine Farion (3537914)
Moshe Reuveni (811290)
Andrew Glidle (1311573)
Chantal RĂŠmy (3537917)
Jonathan Coles (222149)

June 2015

Additional file 1: Numerical tabulation of profiles of Tom20 and GAPDH after normalization and align...

Patient-derived glioblastoma cultures as a tool for small-molecule drug discovery

Lin, Fallon
Stockwell, Brent
deCarvalho, Ana
Ye, Ling
Yang, Guizhi
Pagliarini, Raymond
Malesky, Kimberly
Gao, Hui
Korn, Joshua

January 2020

There is a compelling need for new therapeutic strategies for glioblastoma multiforme (GBM). Preclin...

MOESM1 of Personalized treatment based on mini patient-derived xenografts and WES/RNA sequencing in a patient with metastatic duodenal adenocarcinoma

Peng Zhao (128233)
Hui Chen (28597)
Danyi Wen (508019)
Shuo Mou (5681804)
Feifei Zhang (105135)
Shusen Zheng (187083)

August 2018

Additional file 1: Table S1. Quality control metrics of targeted sequencing data. Table S2. Quality ...

MOESM1 of Xenograft tumors derived from malignant pleural effusion of the patients with non-small-cell lung cancer as models to explore drug resistance

Yunhua Xu (1794451)
Feifei Zhang (105135)
Xiaoqing Pan (202756)
Guan Wang (109695)
Lei Zhu (16642)
Jie Zhang (64655)
Danyi Wen (508019)
Shun Lu (402894)

May 2018

Additional file 1: Table S1. Summary of whole exome sequencing data quality control for patient-deri...

MOESM1 of Temozolomide promotes genomic and phenotypic changes in glioblastoma cells

Aleksei Stepanenko (3480140)
Svitlana Andreieva (3480137)
Kateryna Korets (3480149)
Dmytro Mykytenko (3480143)
Vladimir Baklaushev (3480128)
Nataliya Huleyuk (3480125)
Oksana Kovalova (3480134)
Kateryna Kotsarenko (3480131)
Vladimir Chekhonin (3457331)
Yegor Vassetzky (104268)
Stanislav Avdieiev (3480122)
Vladimir Dmitrenko (3480146)

May 2016

Additional file 1: Table S1. A list of CCAs/NCCAs and their copy number variation in U251, U251TMZ1 ...

Patient-Specific Orthotopic Glioblastoma Xenograft Models Recapitulate the Histopathology and Biology of Human Glioblastomas In Situ

Kyeung Min Joo
Jinkuk Kim
Juyoun Jin
Misuk Kim
Ho Jun Seol
Johongir Muradov
Heekyoung Yang
Yoon-La Choi
Woong-Yang Park
Doo-Sik Kong
Jung-Il Lee
Young-Hyeh Ko
Hyun Goo Woo
Jeongwu Lee
Sunghoon Kim
Do-Hyun Nam

January 2013

Frequent discrepancies between preclinical and clinical results of anticancer agents demand a reliab...

Patient-Specific Orthotopic Glioblastoma Xenograft Models Recapitulate the Histopathology and Biology of Human Glioblastomas In Situ

Joo, Kyeung Min
Kim, Jinkuk
Jin, Juyoun
Kim, Misuk
Seol, Ho Jun
Muradov, Johongir
Yang, Heekyoung
Choi, Yoon-La
Park, Woong-Yang
Kong, Doo-Sik
Lee, Jung-Il
Ko, Young-Hyeh
Woo, Hyun Goo
Lee, Jeongwu
Kim, Sunghoon
Nam, Do-Hyun

January 2013

SummaryFrequent discrepancies between preclinical and clinical results of anticancer agents demand a...

MOESM1 of Optimized creation of glioblastoma patient derived xenografts for use in preclinical studies

Abstract

Extracted data

MOESM1 of Optimized creation of glioblastoma patient derived xenografts for use in preclinical studies

Abstract

Extracted data

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