Number of sRNA species mapping to different TE reference datasets. Table S2. Mapping of U_sRNA and M_sRNA species to exemplars and annotated TE populations for all families combined. Table S3. Size and mapping characteristics of mRNA libraries. (DOCX 102 kb
Figure S1. Sequencing statistics. A) Library size: Number of raw reads in the samples; Alignment: Nu...
Table S1. The effect of altering order of ROP step on the classification accuracy. Table S2. Concord...
Table S1. Sequences of specific stem-loop reverse transcription primers. Table S2. Sequences of PCR ...
Table S1. List of the generated datasets with public accession numbers. Table S2. Analysed published...
Table S1. Sizes of nucleic acid fragments used and generated during QsRNA-seq library preparation pr...
Statistics of RNA sequencing reads. Table S2. Summary of de novo sequence assembly using Trinity. Ta...
Table S3. Number of SNPs predicted from RNA-seq data under different paired-end read lengths, assemb...
Figure S1. Density plot of read lengths for all three kits and tissues respectively by site. Site2 s...
Extended protocol. QsRNA-seq: preparation of sRNA libraries using size selection on SPRI beads. (PDF...
RNA-Seq sample table. The file contains an XLSX spreadsheet of the RNA-Seq data sets used in this st...
Table S2. Summary of read mapping of peach (cv. HJ and cv. YL) and mandarin (cv. PK and cv. YP) tra...
Table S1. Numbers of indexed k-mer for each transcript. Table S2. List of paralogous genes and numbe...
Table in Excel format containing the information about sRNA, target mRNA, sRNA subzone, site of sRNA...
Table S2. Summary of 16S rRNA copy statistics for each bacterial genome. Included is the number of 1...
Exemplary results (figure in PNG format) of StructRNAfinder in Leishmania braziliensis genome. (A) A...
Figure S1. Sequencing statistics. A) Library size: Number of raw reads in the samples; Alignment: Nu...
Table S1. The effect of altering order of ROP step on the classification accuracy. Table S2. Concord...
Table S1. Sequences of specific stem-loop reverse transcription primers. Table S2. Sequences of PCR ...
Table S1. List of the generated datasets with public accession numbers. Table S2. Analysed published...
Table S1. Sizes of nucleic acid fragments used and generated during QsRNA-seq library preparation pr...
Statistics of RNA sequencing reads. Table S2. Summary of de novo sequence assembly using Trinity. Ta...
Table S3. Number of SNPs predicted from RNA-seq data under different paired-end read lengths, assemb...
Figure S1. Density plot of read lengths for all three kits and tissues respectively by site. Site2 s...
Extended protocol. QsRNA-seq: preparation of sRNA libraries using size selection on SPRI beads. (PDF...
RNA-Seq sample table. The file contains an XLSX spreadsheet of the RNA-Seq data sets used in this st...
Table S2. Summary of read mapping of peach (cv. HJ and cv. YL) and mandarin (cv. PK and cv. YP) tra...
Table S1. Numbers of indexed k-mer for each transcript. Table S2. List of paralogous genes and numbe...
Table in Excel format containing the information about sRNA, target mRNA, sRNA subzone, site of sRNA...
Table S2. Summary of 16S rRNA copy statistics for each bacterial genome. Included is the number of 1...
Exemplary results (figure in PNG format) of StructRNAfinder in Leishmania braziliensis genome. (A) A...
Figure S1. Sequencing statistics. A) Library size: Number of raw reads in the samples; Alignment: Nu...
Table S1. The effect of altering order of ROP step on the classification accuracy. Table S2. Concord...
Table S1. Sequences of specific stem-loop reverse transcription primers. Table S2. Sequences of PCR ...