Additional file 5: of Genomic regions underlying susceptibility to bovine tuberculosis in Holstein-Friesian cattle

Additional file 13: Table S8. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Details on the distinctive characteristics defining each of the three groups described in this study...

A genome wide association scan of bovine tuberculosis susceptibility in Holstein-Friesian dairy cattle

Emma K. Finlay
Donagh P. Berry
Brian Wickham
Eamonn P. Gormley
Daniel G. Bradley

January 2012

Background: Bovine tuberculosis is a significant veterinary and financial problem in many parts of t...

Additional file 5: Figure S2. of Large-scale genomic analysis shows association between homoplastic genetic variation in Mycobacterium tuberculosis genes and meningeal or pulmonary tuberculosis

Carolien Ruesen (4823031)
Lidya Chaidir (103945)
Arjan van Laarhoven (4823034)
Sofiati Dian (103936)
Ahmad Ganiem (4823028)
Hanna Nebenzahl-Guimaraes (566998)
Martijn Huynen (189382)
Bachti Alisjahbana (270243)
Bas Dutilh (3461924)
Reinout van Crevel (60606)

February 2018

P-values of association between genes and TB disease phenotype in the discovery and validation sets....

Additional file 6: of Genomic regions underlying susceptibility to bovine tuberculosis in Holstein-Friesian cattle

Kethusegile Raphaka (3858487)
Oswald Matika (561285)
Enrique Sánchez-Molano (3858661)
Raphael Mrode (3201009)
Mike Coffey (3207387)
Valentina Riggio (3291318)
Elizabeth Glass (14089)
John Woolliams (3525701)
Stephen Bishop (2150092)
Georgios Banos (357423)

March 2017

Linkage disequilibrium (r2) map of a QTL region on BTA 23 affecting bTB (phenotype 2). The region ra...

Additional file 7: of Genomic regions underlying susceptibility to bovine tuberculosis in Holstein-Friesian cattle

Kethusegile Raphaka (3858487)
Oswald Matika (561285)
Enrique Sรกnchez-Molano (3504275)
Raphael Mrode (3201009)
Mike Coffey (3207387)
Valentina Riggio (3291318)
Elizabeth Glass (14089)
John Woolliams (3525701)
Stephen Bishop (2150092)
Georgios Banos (357423)

March 2017

Manhattan plots displaying results of chromosomal association analyses of three bovine tuberculosis ...

Additional file 1: of Genomic regions underlying susceptibility to bovine tuberculosis in Holstein-Friesian cattle

Kethusegile Raphaka (3858487)
Oswald Matika (561285)
Enrique Sรกnchez-Molano (3504275)
Raphael Mrode (3201009)
Mike Coffey (3207387)
Valentina Riggio (3291318)
Elizabeth Glass (14089)
John Woolliams (3525701)
Stephen Bishop (2150092)
Georgios Banos (357423)

March 2017

Multi-dimensional scaling (Principal Component) analysis of an identity by state matrix of 804 bulls...

Additional file 5: of Fine-mapping host genetic variation underlying outcomes to Mycobacterium bovis infection in dairy cows

S. Wilkinson (4171426)
S.C. Bishop (4171435)
A.R. Allen (4171417)
S.H. McBride (4171432)
R.A. Skuce (4171423)
M. Bermingham (4171429)
J.A. Woolliams (4171414)
E.J. Glass (4171420)

June 2017

Genome-wide association analysis for NVLs vs VLs a Manhattan plot displaying the –log10(P- value) of...

Variance components for bovine tuberculosis infection and multi-breed genome-wide association analysis using imputed whole genome sequence data

S. C. Ring (6335705)
D. C. Purfield (6335708)
M. Good (6335711)
P. Breslin (6335714)
E. Ryan (6335717)
A. Blom (6335720)
R. D. Evans (6335723)
M. L. Doherty (6335726)
D. G. Bradley (6335729)
D. P. Berry (6335732)

February 2019

Bovine tuberculosis (bTB) is an infectious disease of cattle generally caused by Mycobacterium bovis...

Data from: Genome-wide association study identifies novel loci associated with resistance to bovine tuberculosis

Bermingham, Mairead L.
Bishop, Stephen C.
Woolliams, John A.
Pong-Wong, Ricardo
Allen, Adrian R.
McBride, Stewart H.
McDowell, Stanley W. J.
Skuce, Robin A.
Ryder, Jon J.
Wright, David M.
Glass, Elizabeth J.

November 2013

Tuberculosis caused by Mycobacterium bovis is a re- emerging disease of livestock which is of major ...

Short communication: Uncovering quantitative trait loci associated with resistance to Mycobacterium avium ssp. paratuberculosis infection in Holstein cattle using a high-density single nucleotide polymorphism panel

Mallikarjunappa, Sanjay
Sargolzaei, Mehdi
Brito, Luiz F.
Meade, Kieran G
Karrow, N. A.
Pant, S. D.

August 2019

Mycobacterium avium ssp. paratuberculosis (MAP) is the etiological agent of Johne\u27s disease in ca...

Table_1_Whole Genome Sequencing of Mycobacterium bovis Isolated From Livestock in the United States, 1989–2018.xlsx

Kathy Orloski (5908496)
Suelee Robbe-Austerman (90829)
Tod Stuber (846459)
Bill Hench (5908499)
Mark Schoenbaum (5908502)

October 2018

The United States official bovine tuberculosis (bTB) eradication program has utilized genotyping for...

Variance components for bovine tuberculosis infection and multi-breed genome-wide association analysis using imputed whole genome sequence data.

S C Ring
D C Purfield
M Good
P Breslin
E Ryan
A Blom
R D Evans
M L Doherty
D G Bradley
D P Berry

January 2019

Bovine tuberculosis (bTB) is an infectious disease of cattle generally caused by Mycobacterium bovis...

Additional file 1: of A missense mutation in TUBD1 is associated with high juvenile mortality in Braunvieh and Fleckvieh cattle

Hermann Schwarzenbacher (236302)
Johann Burgstaller (3528014)
Franz Seefried (3504269)
Christine Wurmser (151766)
Monika Hilbe (3528023)
Simone Jung (151775)
Christian Fuerst (505150)
Nora Dinhopl (3528020)
Herbert WeissenbĂśck (3528044)
Birgit Fuerst-Waltl (3528011)
Marlies Dolezal (254225)
Reinhard Winkler (3528008)
Oskar Grueter (3528005)
Ulrich Bleul (3528002)
Thomas Wittek (3528017)
Ruedi Fries (151786)
Hubert Pausch (151770)

May 2016

Genotype distribution of 52 sequence variants in LD with BH2. Non-reference allele frequency and gen...

Table_1_Genome-wide association studies for the identification of cattle susceptible and resilient to paratuberculosis.XLSX

Marta Alonso-Hearn (489834)
Gerard Badia-Bringué (11349308)
Maria Canive (11349305)

September 2022

Mycobacterium avium subsp. paratuberculosis (MAP) causes Johne's disease or paratuberculosis (PTB), ...

Additional file 6: of A missense mutation in TUBD1 is associated with high juvenile mortality in Braunvieh and Fleckvieh cattle

Hermann Schwarzenbacher (236302)
Johann Burgstaller (3528014)
Franz Seefried (3504269)
Christine Wurmser (151766)
Monika Hilbe (3528023)
Simone Jung (151775)
Christian Fuerst (505150)
Nora Dinhopl (3528020)
Herbert WeissenbĂśck (3528044)
Birgit Fuerst-Waltl (3528011)
Marlies Dolezal (254225)
Reinhard Winkler (3528008)
Oskar Grueter (3528005)
Ulrich Bleul (3528002)
Thomas Wittek (3528017)
Ruedi Fries (151786)
Hubert Pausch (151770)

May 2016

Haplotype analysis in Braunvieh, Fleckvieh and Holstein cattle. The BH2 and BH2FV haplotypes were de...

Additional file 13: Table S8. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Details on the distinctive characteristics defining each of the three groups described in this study...

A genome wide association scan of bovine tuberculosis susceptibility in Holstein-Friesian dairy cattle

Emma K. Finlay
Donagh P. Berry
Brian Wickham
Eamonn P. Gormley
Daniel G. Bradley

January 2012

Background: Bovine tuberculosis is a significant veterinary and financial problem in many parts of t...

Additional file 5: Figure S2. of Large-scale genomic analysis shows association between homoplastic genetic variation in Mycobacterium tuberculosis genes and meningeal or pulmonary tuberculosis

Carolien Ruesen (4823031)
Lidya Chaidir (103945)
Arjan van Laarhoven (4823034)
Sofiati Dian (103936)
Ahmad Ganiem (4823028)
Hanna Nebenzahl-Guimaraes (566998)
Martijn Huynen (189382)
Bachti Alisjahbana (270243)
Bas Dutilh (3461924)
Reinout van Crevel (60606)

February 2018

P-values of association between genes and TB disease phenotype in the discovery and validation sets....

Additional file 6: of Genomic regions underlying susceptibility to bovine tuberculosis in Holstein-Friesian cattle

Kethusegile Raphaka (3858487)
Oswald Matika (561285)
Enrique Sánchez-Molano (3858661)
Raphael Mrode (3201009)
Mike Coffey (3207387)
Valentina Riggio (3291318)
Elizabeth Glass (14089)
John Woolliams (3525701)
Stephen Bishop (2150092)
Georgios Banos (357423)

March 2017

Linkage disequilibrium (r2) map of a QTL region on BTA 23 affecting bTB (phenotype 2). The region ra...

Additional file 7: of Genomic regions underlying susceptibility to bovine tuberculosis in Holstein-Friesian cattle

Kethusegile Raphaka (3858487)
Oswald Matika (561285)
Enrique Sรกnchez-Molano (3504275)
Raphael Mrode (3201009)
Mike Coffey (3207387)
Valentina Riggio (3291318)
Elizabeth Glass (14089)
John Woolliams (3525701)
Stephen Bishop (2150092)
Georgios Banos (357423)

March 2017

Manhattan plots displaying results of chromosomal association analyses of three bovine tuberculosis ...

Additional file 1: of Genomic regions underlying susceptibility to bovine tuberculosis in Holstein-Friesian cattle

Kethusegile Raphaka (3858487)
Oswald Matika (561285)
Enrique Sรกnchez-Molano (3504275)
Raphael Mrode (3201009)
Mike Coffey (3207387)
Valentina Riggio (3291318)
Elizabeth Glass (14089)
John Woolliams (3525701)
Stephen Bishop (2150092)
Georgios Banos (357423)

March 2017

Multi-dimensional scaling (Principal Component) analysis of an identity by state matrix of 804 bulls...

Additional file 5: of Fine-mapping host genetic variation underlying outcomes to Mycobacterium bovis infection in dairy cows

S. Wilkinson (4171426)
S.C. Bishop (4171435)
A.R. Allen (4171417)
S.H. McBride (4171432)
R.A. Skuce (4171423)
M. Bermingham (4171429)
J.A. Woolliams (4171414)
E.J. Glass (4171420)

June 2017

Genome-wide association analysis for NVLs vs VLs a Manhattan plot displaying the –log10(P- value) of...

Variance components for bovine tuberculosis infection and multi-breed genome-wide association analysis using imputed whole genome sequence data

S. C. Ring (6335705)
D. C. Purfield (6335708)
M. Good (6335711)
P. Breslin (6335714)
E. Ryan (6335717)
A. Blom (6335720)
R. D. Evans (6335723)
M. L. Doherty (6335726)
D. G. Bradley (6335729)
D. P. Berry (6335732)

February 2019

Bovine tuberculosis (bTB) is an infectious disease of cattle generally caused by Mycobacterium bovis...

Data from: Genome-wide association study identifies novel loci associated with resistance to bovine tuberculosis

Bermingham, Mairead L.
Bishop, Stephen C.
Woolliams, John A.
Pong-Wong, Ricardo
Allen, Adrian R.
McBride, Stewart H.
McDowell, Stanley W. J.
Skuce, Robin A.
Ryder, Jon J.
Wright, David M.
Glass, Elizabeth J.

November 2013

Tuberculosis caused by Mycobacterium bovis is a re- emerging disease of livestock which is of major ...

Short communication: Uncovering quantitative trait loci associated with resistance to Mycobacterium avium ssp. paratuberculosis infection in Holstein cattle using a high-density single nucleotide polymorphism panel

Mallikarjunappa, Sanjay
Sargolzaei, Mehdi
Brito, Luiz F.
Meade, Kieran G
Karrow, N. A.
Pant, S. D.

August 2019

Mycobacterium avium ssp. paratuberculosis (MAP) is the etiological agent of Johne\u27s disease in ca...

Table_1_Whole Genome Sequencing of Mycobacterium bovis Isolated From Livestock in the United States, 1989–2018.xlsx

Kathy Orloski (5908496)
Suelee Robbe-Austerman (90829)
Tod Stuber (846459)
Bill Hench (5908499)
Mark Schoenbaum (5908502)

October 2018

The United States official bovine tuberculosis (bTB) eradication program has utilized genotyping for...

Variance components for bovine tuberculosis infection and multi-breed genome-wide association analysis using imputed whole genome sequence data.

S C Ring
D C Purfield
M Good
P Breslin
E Ryan
A Blom
R D Evans
M L Doherty
D G Bradley
D P Berry

January 2019

Bovine tuberculosis (bTB) is an infectious disease of cattle generally caused by Mycobacterium bovis...

Additional file 1: of A missense mutation in TUBD1 is associated with high juvenile mortality in Braunvieh and Fleckvieh cattle

Hermann Schwarzenbacher (236302)
Johann Burgstaller (3528014)
Franz Seefried (3504269)
Christine Wurmser (151766)
Monika Hilbe (3528023)
Simone Jung (151775)
Christian Fuerst (505150)
Nora Dinhopl (3528020)
Herbert WeissenbĂśck (3528044)
Birgit Fuerst-Waltl (3528011)
Marlies Dolezal (254225)
Reinhard Winkler (3528008)
Oskar Grueter (3528005)
Ulrich Bleul (3528002)
Thomas Wittek (3528017)
Ruedi Fries (151786)
Hubert Pausch (151770)

May 2016

Genotype distribution of 52 sequence variants in LD with BH2. Non-reference allele frequency and gen...

Table_1_Genome-wide association studies for the identification of cattle susceptible and resilient to paratuberculosis.XLSX

Marta Alonso-Hearn (489834)
Gerard Badia-Bringué (11349308)
Maria Canive (11349305)

September 2022

Mycobacterium avium subsp. paratuberculosis (MAP) causes Johne's disease or paratuberculosis (PTB), ...

Additional file 6: of A missense mutation in TUBD1 is associated with high juvenile mortality in Braunvieh and Fleckvieh cattle

Hermann Schwarzenbacher (236302)
Johann Burgstaller (3528014)
Franz Seefried (3504269)
Christine Wurmser (151766)
Monika Hilbe (3528023)
Simone Jung (151775)
Christian Fuerst (505150)
Nora Dinhopl (3528020)
Herbert WeissenbĂśck (3528044)
Birgit Fuerst-Waltl (3528011)
Marlies Dolezal (254225)
Reinhard Winkler (3528008)
Oskar Grueter (3528005)
Ulrich Bleul (3528002)
Thomas Wittek (3528017)
Ruedi Fries (151786)
Hubert Pausch (151770)

May 2016

Haplotype analysis in Braunvieh, Fleckvieh and Holstein cattle. The BH2 and BH2FV haplotypes were de...

Additional file 13: Table S8. of Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates

Moira Lasserre (4064500)
Pablo Fresia (465613)
Gonzalo Greif (4728270)
Gregorio Iraola (144706)
Miguel Castro-Ramos (4728276)
Arturo Juambeltz (4728267)
Álvaro Nuñez (4728273)
Hugo Naya (144710)
Carlos Robello (238938)
Luisa Berná (4288387)

January 2018

Details on the distinctive characteristics defining each of the three groups described in this study...

A genome wide association scan of bovine tuberculosis susceptibility in Holstein-Friesian dairy cattle

Emma K. Finlay
Donagh P. Berry
Brian Wickham
Eamonn P. Gormley
Daniel G. Bradley

January 2012

Background: Bovine tuberculosis is a significant veterinary and financial problem in many parts of t...

Additional file 5: Figure S2. of Large-scale genomic analysis shows association between homoplastic genetic variation in Mycobacterium tuberculosis genes and meningeal or pulmonary tuberculosis

Carolien Ruesen (4823031)
Lidya Chaidir (103945)
Arjan van Laarhoven (4823034)
Sofiati Dian (103936)
Ahmad Ganiem (4823028)
Hanna Nebenzahl-Guimaraes (566998)
Martijn Huynen (189382)
Bachti Alisjahbana (270243)
Bas Dutilh (3461924)
Reinout van Crevel (60606)

February 2018

P-values of association between genes and TB disease phenotype in the discovery and validation sets....

Additional file 5: of Genomic regions underlying susceptibility to bovine tuberculosis in Holstein-Friesian cattle

Abstract

Extracted data

Additional file 5: of Genomic regions underlying susceptibility to bovine tuberculosis in Holstein-Friesian cattle

Abstract

Extracted data

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