<p>This figure shows the color-map of the filtered adjacency matrices for the 28 mitochondrial proteins of mammal species. The multiplicity c of the filtering threshold (<i>T</i><sub><i>c</i></sub> = <i>c</i> •<i>A</i><sub><i>max</i></sub>) is varied from 0.9 to 0.1. The elements of the adjacency matrices are mapped to colors from cold (dark blue, minimum connectivity value) to warm (dark red, maximum connectivity value) as indicated in the color bar.</p
A color gradient from white to blue is used to show the affinity change from low to high.</p
LFQ intensity-based heatmap of the top 50 proteins. Top 50 proteins were defined by their mean LFQ i...
<div><p>(A) shows the 546 proteins (in rows) identified from 28 datasets (columns). The proteins are...
<p>The 20×20 amino acid adjacency matrix of the given βTM protein segment is shown. The matrix eleme...
<p>This figure shows the connected components of 3 CATH groups at different thresholds. Each set sta...
<p>Three distinct types of distributions were used to test the algorithm: a simple Gaussian (D1), a ...
<p>Both the rows and the columns are sorted by hierarchical clustering. The colors specify the stren...
<p>The trees were inferred using the maximum-likelihood method and bootstrapped 100 times. Branches ...
<p>Adjacency matrix with rows and columns ordered according to assignment of proteins into classes. ...
<p>(A) The first nine aminoacids of pdb 1AMU. (B and C) Building the four-color map for A. (D) The d...
The file is TAB-delimited and contains 107 lines and 108 columns. The first line is composed by two ...
<div><p>(A) Full network containing 9,780 association lines connecting 876 protein nodes. Lines are ...
<p>The red points constitute the Pareto frontier, while the others represent all the feasible points...
<p>(A-D) MEFs were stained for the mitochondrial marker TOM20 and imaged. Mitochondrial length was t...
<p>The 623 proteins identified as interacting with MYH9 (in the upper left) along with random set of...
A color gradient from white to blue is used to show the affinity change from low to high.</p
LFQ intensity-based heatmap of the top 50 proteins. Top 50 proteins were defined by their mean LFQ i...
<div><p>(A) shows the 546 proteins (in rows) identified from 28 datasets (columns). The proteins are...
<p>The 20×20 amino acid adjacency matrix of the given βTM protein segment is shown. The matrix eleme...
<p>This figure shows the connected components of 3 CATH groups at different thresholds. Each set sta...
<p>Three distinct types of distributions were used to test the algorithm: a simple Gaussian (D1), a ...
<p>Both the rows and the columns are sorted by hierarchical clustering. The colors specify the stren...
<p>The trees were inferred using the maximum-likelihood method and bootstrapped 100 times. Branches ...
<p>Adjacency matrix with rows and columns ordered according to assignment of proteins into classes. ...
<p>(A) The first nine aminoacids of pdb 1AMU. (B and C) Building the four-color map for A. (D) The d...
The file is TAB-delimited and contains 107 lines and 108 columns. The first line is composed by two ...
<div><p>(A) Full network containing 9,780 association lines connecting 876 protein nodes. Lines are ...
<p>The red points constitute the Pareto frontier, while the others represent all the feasible points...
<p>(A-D) MEFs were stained for the mitochondrial marker TOM20 and imaged. Mitochondrial length was t...
<p>The 623 proteins identified as interacting with MYH9 (in the upper left) along with random set of...
A color gradient from white to blue is used to show the affinity change from low to high.</p
LFQ intensity-based heatmap of the top 50 proteins. Top 50 proteins were defined by their mean LFQ i...
<div><p>(A) shows the 546 proteins (in rows) identified from 28 datasets (columns). The proteins are...