Additional file 3: Table S2. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

Additional file 1: of Escovopsioides as a fungal antagonist of the fungus cultivated by leafcutter ants

Julio Osti (5846255)
Andre Rodrigues (242135)

October 2018

Table S1. Sequences used in the phylogenetic analyses and their associated metadata. Figure S1. Fung...

Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

Manuela Oliveira Ramalho
Odair Correa Bueno
Corrie Saux Moreau

April 2017

Abstract Background Symbiotic relationships between insects and bacteria are found across almost all...

Additional file 1: of The first draft genomes of the ant Formica exsecta, and its Wolbachia endosymbiont reveal extensive gene transfer from endosymbiont to host

Kishor Dhaygude (402088)
Abhilash Nair (689200)
Helena Johansson (238878)
Yannick Wurm (120637)
Liselotte Sundstrรถm (6594746)

April 2019

Table S1. Comparison of assembly statistics of the F. exsecta genome and 13 other published ant geno...

Zheng et al-Insects-Supplementary files

Hong He
Zhou Zheng

September 2020

Figure S1: Rarefaction curves of bacterial OTUs for all samples Table S1: Diversity indices of bact...

Additional file 1: of Chemical and behavioral integration of army ant-associated rove beetles – a comparison between specialists and generalists

Christoph von Beeren (3256002)
Adrian Brückner (3910429)
Munetoshi Maruyama (3256008)
Griffin Burke (4972738)
Jana Wieschollek (4972735)
Daniel Kronauer (3199647)

March 2018

Table S1. Colony collection data (downloadable on the journal’s webpage; not included here). (XLSX 1...

Additional file 2: of Species-specific enhancement of enterohemorrhagic E. coli pathogenesis mediated by microbiome metabolites

Alessio Tovaglieri (5039909)
Alexandra Sontheimer-Phelps (6486695)
Annelies Geirnaert (579263)
Rachelle Prantil-Baun (6486698)
Diogo Camacho (6486701)
David Chou (427894)
Sasan Jalili-Firoozinezhad (6486704)
TomĂĄs Wouters (6486707)
Magdalena Kasendra (706294)
Michael Super (1641175)
Mark Cartwright (1436668)
Camilla Richmond (6486710)
David Breault (3441422)
Christophe Lacroix (35954)
Donald Ingber (6486713)

March 2019

Figure S2. Analysis of relative abundance of PolyFermS commensal bacteria genera. Relative abundance...

Additional file 1: of Species-specific enhancement of enterohemorrhagic E. coli pathogenesis mediated by microbiome metabolites

Alessio Tovaglieri (5039909)
Alexandra Sontheimer-Phelps (6486695)
Annelies Geirnaert (579263)
Rachelle Prantil-Baun (6486698)
Diogo Camacho (6486701)
David Chou (427894)
Sasan Jalili-Firoozinezhad (6486704)
TomĂĄs Wouters (6486707)
Magdalena Kasendra (706294)
Michael Super (1641175)
Mark Cartwright (1436668)
Camilla Richmond (6486710)
David Breault (3441422)
Christophe Lacroix (35954)
Donald Ingber (6486713)

March 2019

Figure S1. Analysis of relative abundance of PolyFermS commensal bacteria phyla. Relative abundance ...

Additional file 2: of Chemical and behavioral integration of army ant-associated rove beetles – a comparison between specialists and generalists

Christoph von Beeren (3256002)
Adrian Brückner (3910429)
Munetoshi Maruyama (3256008)
Griffin Burke (4972738)
Jana Wieschollek (4972735)
Daniel Kronauer (3199647)

March 2018

Table S2. Specimen and collection information including GenBank accession numbers (downloadable on t...

Additional file 2: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Genbank accessions for PCR-amplified sequences included in this study. Table including specimen iden...

Additional file 3: Table S3. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of subtilisins, trypsins, and aspartyl proteases identified in O. polyrhachis-furcata com...

Additional file 3: Table S1. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

Matthew Prebus (4684447)

December 2017

Temnothorax species groups currently used in the literature, with references. (XLSX 32Â kb

Additional file 3: of Different laboratory populations similar bacterial profile? The case of Glossina palpalis gambiensis

Vangelis Doudoumis (192535)
Antonios Augustinos (6006005)
Aggeliki Saridaki (352026)
Andrew Parker (133739)
Adly Abd-Alla (3539405)
Kostas Bourtzis (60101)
George Tsiamis (192545)

November 2018

Relative abundance of Wigglesworthia, Sodalis and Streptococcus for the three laboratory colonies ex...

Zheng et al-Insects-Bacterial Composition and Diversity of the Digestive Tract of Odontomachus monticola Forel and Ectomomyrmex javanus Mayr-Supplementary files

Hong He
Zhou Zheng
Xin Hu
Yang Xu
Cong Wei

September 2020

Figure S1: Rarefaction curves of bacterial ASVs for all samples Table S1: Diversity indices of bact...

Additional file 3: of The first draft genomes of the ant Formica exsecta, and its Wolbachia endosymbiont reveal extensive gene transfer from endosymbiont to host

Kishor Dhaygude (402088)
Abhilash Nair (689200)
Helena Johansson (238878)
Yannick Wurm (120637)
Liselotte Sundstrรถm (6594746)

April 2019

Table S3. List of species-specific genes in F. exsecta, as identified by OrthoVenn. (XLSX 24 kb

Additional file 1: Table S1. of Ant mediated redistribution of a xyloglucanase enzyme in fungus gardens of Acromyrmex echinatior

Pepijn Kooij (3432299)
Jeroen Pullens (3432302)
Jacobus Boomsma (3432305)
Morten SchiĂ¸tt (3432308)

May 2016

List of qPCR primers used in this study, including primer sequences, annealing temperatures and frag...

Additional file 1: of Escovopsioides as a fungal antagonist of the fungus cultivated by leafcutter ants

Julio Osti (5846255)
Andre Rodrigues (242135)

October 2018

Table S1. Sequences used in the phylogenetic analyses and their associated metadata. Figure S1. Fung...

Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

Manuela Oliveira Ramalho
Odair Correa Bueno
Corrie Saux Moreau

April 2017

Abstract Background Symbiotic relationships between insects and bacteria are found across almost all...

Additional file 1: of The first draft genomes of the ant Formica exsecta, and its Wolbachia endosymbiont reveal extensive gene transfer from endosymbiont to host

Kishor Dhaygude (402088)
Abhilash Nair (689200)
Helena Johansson (238878)
Yannick Wurm (120637)
Liselotte Sundstrรถm (6594746)

April 2019

Table S1. Comparison of assembly statistics of the F. exsecta genome and 13 other published ant geno...

Zheng et al-Insects-Supplementary files

Hong He
Zhou Zheng

September 2020

Figure S1: Rarefaction curves of bacterial OTUs for all samples Table S1: Diversity indices of bact...

Additional file 1: of Chemical and behavioral integration of army ant-associated rove beetles – a comparison between specialists and generalists

Christoph von Beeren (3256002)
Adrian Brückner (3910429)
Munetoshi Maruyama (3256008)
Griffin Burke (4972738)
Jana Wieschollek (4972735)
Daniel Kronauer (3199647)

March 2018

Table S1. Colony collection data (downloadable on the journal’s webpage; not included here). (XLSX 1...

Additional file 2: of Species-specific enhancement of enterohemorrhagic E. coli pathogenesis mediated by microbiome metabolites

Alessio Tovaglieri (5039909)
Alexandra Sontheimer-Phelps (6486695)
Annelies Geirnaert (579263)
Rachelle Prantil-Baun (6486698)
Diogo Camacho (6486701)
David Chou (427894)
Sasan Jalili-Firoozinezhad (6486704)
TomĂĄs Wouters (6486707)
Magdalena Kasendra (706294)
Michael Super (1641175)
Mark Cartwright (1436668)
Camilla Richmond (6486710)
David Breault (3441422)
Christophe Lacroix (35954)
Donald Ingber (6486713)

March 2019

Figure S2. Analysis of relative abundance of PolyFermS commensal bacteria genera. Relative abundance...

Additional file 1: of Species-specific enhancement of enterohemorrhagic E. coli pathogenesis mediated by microbiome metabolites

Alessio Tovaglieri (5039909)
Alexandra Sontheimer-Phelps (6486695)
Annelies Geirnaert (579263)
Rachelle Prantil-Baun (6486698)
Diogo Camacho (6486701)
David Chou (427894)
Sasan Jalili-Firoozinezhad (6486704)
TomĂĄs Wouters (6486707)
Magdalena Kasendra (706294)
Michael Super (1641175)
Mark Cartwright (1436668)
Camilla Richmond (6486710)
David Breault (3441422)
Christophe Lacroix (35954)
Donald Ingber (6486713)

March 2019

Figure S1. Analysis of relative abundance of PolyFermS commensal bacteria phyla. Relative abundance ...

Additional file 2: of Chemical and behavioral integration of army ant-associated rove beetles – a comparison between specialists and generalists

Christoph von Beeren (3256002)
Adrian Brückner (3910429)
Munetoshi Maruyama (3256008)
Griffin Burke (4972738)
Jana Wieschollek (4972735)
Daniel Kronauer (3199647)

March 2018

Table S2. Specimen and collection information including GenBank accession numbers (downloadable on t...

Additional file 2: of Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants

Bonnie Blaimer (3344411)
SeĂĄn Brady (3517679)
Ted Schultz (611143)
Michael Lloyd (2672767)
Brian Fisher (2460859)
Philip Ward (3517676)

December 2015

Genbank accessions for PCR-amplified sequences included in this study. Table including specimen iden...

Additional file 3: Table S3. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of subtilisins, trypsins, and aspartyl proteases identified in O. polyrhachis-furcata com...

Additional file 3: Table S1. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

Matthew Prebus (4684447)

December 2017

Temnothorax species groups currently used in the literature, with references. (XLSX 32Â kb

Additional file 3: of Different laboratory populations similar bacterial profile? The case of Glossina palpalis gambiensis

Vangelis Doudoumis (192535)
Antonios Augustinos (6006005)
Aggeliki Saridaki (352026)
Andrew Parker (133739)
Adly Abd-Alla (3539405)
Kostas Bourtzis (60101)
George Tsiamis (192545)

November 2018

Relative abundance of Wigglesworthia, Sodalis and Streptococcus for the three laboratory colonies ex...

Zheng et al-Insects-Bacterial Composition and Diversity of the Digestive Tract of Odontomachus monticola Forel and Ectomomyrmex javanus Mayr-Supplementary files

Hong He
Zhou Zheng
Xin Hu
Yang Xu
Cong Wei

September 2020

Figure S1: Rarefaction curves of bacterial ASVs for all samples Table S1: Diversity indices of bact...

Additional file 3: of The first draft genomes of the ant Formica exsecta, and its Wolbachia endosymbiont reveal extensive gene transfer from endosymbiont to host

Kishor Dhaygude (402088)
Abhilash Nair (689200)
Helena Johansson (238878)
Yannick Wurm (120637)
Liselotte Sundstrรถm (6594746)

April 2019

Table S3. List of species-specific genes in F. exsecta, as identified by OrthoVenn. (XLSX 24 kb

Additional file 1: Table S1. of Ant mediated redistribution of a xyloglucanase enzyme in fungus gardens of Acromyrmex echinatior

Pepijn Kooij (3432299)
Jeroen Pullens (3432302)
Jacobus Boomsma (3432305)
Morten SchiĂ¸tt (3432308)

May 2016

List of qPCR primers used in this study, including primer sequences, annealing temperatures and frag...

Additional file 1: of Escovopsioides as a fungal antagonist of the fungus cultivated by leafcutter ants

Julio Osti (5846255)
Andre Rodrigues (242135)

October 2018

Table S1. Sequences used in the phylogenetic analyses and their associated metadata. Figure S1. Fung...

Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

Manuela Oliveira Ramalho
Odair Correa Bueno
Corrie Saux Moreau

April 2017

Abstract Background Symbiotic relationships between insects and bacteria are found across almost all...

Additional file 1: of The first draft genomes of the ant Formica exsecta, and its Wolbachia endosymbiont reveal extensive gene transfer from endosymbiont to host

Kishor Dhaygude (402088)
Abhilash Nair (689200)
Helena Johansson (238878)
Yannick Wurm (120637)
Liselotte Sundstrรถm (6594746)

April 2019

Table S1. Comparison of assembly statistics of the F. exsecta genome and 13 other published ant geno...

Additional file 3: Table S2. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

Abstract

Extracted data

Additional file 3: Table S2. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

Abstract

Extracted data

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