Comparison of PTs of the integrated transcriptome assembly to the IsoSeq cDNA reads, transcripts annotated in Ensembl SSC10.2 and NCBI pig RefSeq mRNA sequences. (A) Venn diagram showing the number of PTs with their intron arrangements validated by the IsoSeq reads, pig RefSeq mRNA sequences and SSC10.2 transcripts; (B) Distribution of exon number of novel spliced transcripts not found in the SSC10.2 annotation or pig RefSeq mRNA set, which provides good evidence of significant extension of current genome annotation; (C) Length comparison between PTs and their maximally overlapping SSC10.2 transcripts; (D) Length comparison between PTs and their maximally overlapping RefSeq mRNA sequences. (PDF 9912Â kb
The domestic pig (Sus scrofa) is both an economically important livestock species and a model for bi...
Enrichement analysis of distant-associated genes in eGWAS by GOrilla. (XLSX 21 kb
Additional file 2: Table S2. Summary of reads mapping to RNA regions of the swine genome. Number of ...
Figure S1. (a) Classification of biotypes for detected transcripts; length distribution of transcrip...
Characterization of the genome-guided transcriptome assembly. (A) Length distribution of PTs in the ...
Abstract Background High throughput gene expression profiling assays of peripheral blood are widely ...
Complete Blood Cell Counts for 195 animals among the 243 eGWAS pigs. (XLSX 14 kb
Genes annotated by sense and/or antisense probes found associated with local or distant eQTL-SNPs. (...
Assembled transcripts mapping statistics to the NCBI nucleotide database based on the originally unm...
QTLs in AnimalQTLdb for pigs (<10Â Mb) harbouring at least one ASE-SNPs. (XLSX 44 kb
Distribution of eQTL-SNPs along pig autosomal chromosomes. The histograms represent the distribution...
Distribution of ASE-SNPs along pig autosomal chromosomes. The histograms represent the distribution ...
Additional file 1: Fig. S1. Illustration of gene annotation, combining the Ensembl (ENS) pig referen...
RIGHTS : This article is licensed under the BioMed Central licence at http://www.biomedcentral.com/...
Additional file 1: Figure S1. Relationship of the estimates of heritability of gene expression with ...
The domestic pig (Sus scrofa) is both an economically important livestock species and a model for bi...
Enrichement analysis of distant-associated genes in eGWAS by GOrilla. (XLSX 21 kb
Additional file 2: Table S2. Summary of reads mapping to RNA regions of the swine genome. Number of ...
Figure S1. (a) Classification of biotypes for detected transcripts; length distribution of transcrip...
Characterization of the genome-guided transcriptome assembly. (A) Length distribution of PTs in the ...
Abstract Background High throughput gene expression profiling assays of peripheral blood are widely ...
Complete Blood Cell Counts for 195 animals among the 243 eGWAS pigs. (XLSX 14 kb
Genes annotated by sense and/or antisense probes found associated with local or distant eQTL-SNPs. (...
Assembled transcripts mapping statistics to the NCBI nucleotide database based on the originally unm...
QTLs in AnimalQTLdb for pigs (<10Â Mb) harbouring at least one ASE-SNPs. (XLSX 44 kb
Distribution of eQTL-SNPs along pig autosomal chromosomes. The histograms represent the distribution...
Distribution of ASE-SNPs along pig autosomal chromosomes. The histograms represent the distribution ...
Additional file 1: Fig. S1. Illustration of gene annotation, combining the Ensembl (ENS) pig referen...
RIGHTS : This article is licensed under the BioMed Central licence at http://www.biomedcentral.com/...
Additional file 1: Figure S1. Relationship of the estimates of heritability of gene expression with ...
The domestic pig (Sus scrofa) is both an economically important livestock species and a model for bi...
Enrichement analysis of distant-associated genes in eGWAS by GOrilla. (XLSX 21 kb
Additional file 2: Table S2. Summary of reads mapping to RNA regions of the swine genome. Number of ...