Additional file 3: Figure S2. of Global gene expression profiling and senescence biomarker analysis of hESC exposed to H2O2 induced non-cytotoxic oxidative stress

Differential resistance of human embryonic stem cells and somatic cell types to hydrogen peroxide-induced genotoxicity may be dependent on innate basal intracellular ROS levels

Vinoth, Kumar Jayaseelan
Manikandan, Jayapal
Sethu, Swaminathan
Balakrishnan, Lakshmidevi
Heng, Alexis
Lu, Kai
Poonepalli, Anuradha
Hande, Manoor Prakash
Cao, Tong

July 2015

Previously, we demonstrated that undifferentiated human embryonic stem cells (hESC) displayed higher...

Time series analysis of oxidative stress response patterns in HepG2: A toxicogenomics approach

Deferme, L.
Briede, J. J.
Claessen, S. M. H.
Jennen, D. G. J.
Cavil, R.
Kleinjans, J. C. S.

April 2013

Oxidative stress plays an important role in chemically induced liver injury, however, our insight in...

Additional file 2: of Variable gene transcription underlies phenotypic convergence of hypoxia tolerance in sculpins

Milica Mandic (3282924)
Marina Ramon (5927120)
Aleeza Gerstein (3702970)
Andrew Gracey (77610)
Jeffrey Richards (3357743)

November 2018

Figure S2. Transcript levels of genes associated with metabolism. Colours and symbols represent diff...

Additional file 5: Figure S4. of Global gene expression profiling and senescence biomarker analysis of hESC exposed to H2O2 induced non-cytotoxic oxidative stress

Maria Barandalla (4223323)
Hui Shi (278337)
Hui Xiao (185054)
Silvia Colleoni (4223317)
Cesare Galli (2825717)
Pietro Lio (4223320)
Matthew Trotter (188553)
Giovanna Lazzari (2825726)

July 2017

Dose-response curves following hydrogen peroxide (H2O2) 24 h exposure. HUES3, HUES7, Hs27 and HUVEC ...

Global gene expression profiling and senescence biomarker analysis of hESC exposed to H2O2 induced non-cytotoxic oxidative stress

Maria Barandalla
Hui Shi
Hui Xiao
Silvia Colleoni
Cesare Galli
Pietro Lio
Matthew Trotter
Giovanna Lazzari

July 2017

Abstract Background Human embryonic stem cells (hESCs) potentially offer new routes to study, on the...

Comparison of oxidative stress effects on senescence patterning of human adult and perinatal tissue-derived stem cells in short and long-term cultures

Facchin F.
Bianconi E.
Romano M.
Impellizzeri A.
Alviano F.
Maioli M.
Canaider S.
Ventura C.

January 2018

Human Mesenchymal Stem Cells (hMSCs) undergo senescence in lifespan. In most clinical trials, hMSCs ...

Changes to endothelial cell function induced by hydrogen peroxide : a model of cell senescence

Samantha Petula. Tull (7670519)

January 2003

Endothelial dysfunction is an early stage in atherosclerosis and is associated with oxidative stress...

Additional file 1: of Effect of β-hydroxy-β-methylbutyrate on miRNA expression in differentiating equine satellite cells exposed to hydrogen peroxide

Karolina Chodkowska (5077964)
Anna Ciecierska (4815738)
Kinga Majchrzak (468125)
Piotr Ostaszewski (5077961)
Tomasz Sadkowski (4815744)

April 2018

Table S1. Genes differentially expressed in HMB-incubated equine satellite cells exposed to H2O2, co...

Additional file 2: of Effect of β-hydroxy-β-methylbutyrate on miRNA expression in differentiating equine satellite cells exposed to hydrogen peroxide

Karolina Chodkowska (5077964)
Anna Ciecierska (4815738)
Kinga Majchrzak (468125)
Piotr Ostaszewski (5077961)
Tomasz Sadkowski (4815744)

April 2018

Table S2. Biological function of differentially expressed genes (DEG). (XLSX 28 kb

iAF cells undergo H2O2-induced senescence.

Aaryn Montgomery-Song (17743233)
Sajjad Ashraf (529605)
Paul Santerre (17743236)
Rita Kandel (6909809)

January 2024

(A) Representative phase contrast images and quantification of senescence associated β-galactosidase...

Additional file 4: of HER2 regulates HIF-2α and drives an increased hypoxic response in breast cancer

Edward Jarman (6253052)
Carol Ward (693454)
Arran Turnbull (5337878)
Carlos Martinez-Perez (4318249)
James Meehan (6253055)
Chrysi Xintaropoulou (5337881)
Andrew Sims (3455423)
Simon Langdon (2163259)

January 2019

Figure S4. HER2-driven hypoxic expression of HIF-2α-specific target genes. The expression levels of ...

Additional file 3: of Genome-independent hypoxic repression of estrogen receptor alpha in breast cancer cells

Mercè Padró (3848701)
Raymond Louie (3848704)
Brian Lananna (3848713)
Adam Krieg (3848707)
Luika Timmerman (3848716)
Denise Chan (3848710)

March 2017

(A) qPCR analysis of mRNA levels of ESR1 and HIF1A at normoxia (N) or hypoxia (H) (1% O2, 24 h) trea...

Additional file 2: of HER2 regulates HIF-2α and drives an increased hypoxic response in breast cancer

Edward Jarman (6253052)
Carol Ward (693454)
Arran Turnbull (5337878)
Carlos Martinez-Perez (4318249)
James Meehan (6253055)
Chrysi Xintaropoulou (5337881)
Andrew Sims (3455423)
Simon Langdon (2163259)

January 2019

Figure S2. HIF2A expression is higher in cell lines with high HER2 expression. A cell line data set ...

Additional file 2: of Using in vivo oxidation status of one- and two-component redox relays to determine H2O2 levels linked to signaling and toxicity

Alba Domènech (4166935)
José Ayté (51457)
Fernando Antunes (3088005)
Elena Hidalgo (51458)

June 2018

Figure S2. Kinetics of OxyR and Tpx1 oxidation. a In cells deficient in Tpx1 or Trx1, HA-OxyR oxidiz...

Hydrogen Peroxide–Induced Gene Expression across Kingdoms: A Comparative Analysis

Korneel V
Steven Robbens
Klaas V
Yves Van De
Frank Van Breusegem

March 2015

Cells react to oxidative stress conditions by launching a defense response through the induction of ...

Differential resistance of human embryonic stem cells and somatic cell types to hydrogen peroxide-induced genotoxicity may be dependent on innate basal intracellular ROS levels

Vinoth, Kumar Jayaseelan
Manikandan, Jayapal
Sethu, Swaminathan
Balakrishnan, Lakshmidevi
Heng, Alexis
Lu, Kai
Poonepalli, Anuradha
Hande, Manoor Prakash
Cao, Tong

July 2015

Previously, we demonstrated that undifferentiated human embryonic stem cells (hESC) displayed higher...

Time series analysis of oxidative stress response patterns in HepG2: A toxicogenomics approach

Deferme, L.
Briede, J. J.
Claessen, S. M. H.
Jennen, D. G. J.
Cavil, R.
Kleinjans, J. C. S.

April 2013

Oxidative stress plays an important role in chemically induced liver injury, however, our insight in...

Additional file 2: of Variable gene transcription underlies phenotypic convergence of hypoxia tolerance in sculpins

Milica Mandic (3282924)
Marina Ramon (5927120)
Aleeza Gerstein (3702970)
Andrew Gracey (77610)
Jeffrey Richards (3357743)

November 2018

Figure S2. Transcript levels of genes associated with metabolism. Colours and symbols represent diff...

Additional file 5: Figure S4. of Global gene expression profiling and senescence biomarker analysis of hESC exposed to H2O2 induced non-cytotoxic oxidative stress

Maria Barandalla (4223323)
Hui Shi (278337)
Hui Xiao (185054)
Silvia Colleoni (4223317)
Cesare Galli (2825717)
Pietro Lio (4223320)
Matthew Trotter (188553)
Giovanna Lazzari (2825726)

July 2017

Dose-response curves following hydrogen peroxide (H2O2) 24 h exposure. HUES3, HUES7, Hs27 and HUVEC ...

Global gene expression profiling and senescence biomarker analysis of hESC exposed to H2O2 induced non-cytotoxic oxidative stress

Maria Barandalla
Hui Shi
Hui Xiao
Silvia Colleoni
Cesare Galli
Pietro Lio
Matthew Trotter
Giovanna Lazzari

July 2017

Abstract Background Human embryonic stem cells (hESCs) potentially offer new routes to study, on the...

Comparison of oxidative stress effects on senescence patterning of human adult and perinatal tissue-derived stem cells in short and long-term cultures

Facchin F.
Bianconi E.
Romano M.
Impellizzeri A.
Alviano F.
Maioli M.
Canaider S.
Ventura C.

January 2018

Human Mesenchymal Stem Cells (hMSCs) undergo senescence in lifespan. In most clinical trials, hMSCs ...

Changes to endothelial cell function induced by hydrogen peroxide : a model of cell senescence

Samantha Petula. Tull (7670519)

January 2003

Endothelial dysfunction is an early stage in atherosclerosis and is associated with oxidative stress...

Additional file 1: of Effect of β-hydroxy-β-methylbutyrate on miRNA expression in differentiating equine satellite cells exposed to hydrogen peroxide

Karolina Chodkowska (5077964)
Anna Ciecierska (4815738)
Kinga Majchrzak (468125)
Piotr Ostaszewski (5077961)
Tomasz Sadkowski (4815744)

April 2018

Table S1. Genes differentially expressed in HMB-incubated equine satellite cells exposed to H2O2, co...

Additional file 2: of Effect of β-hydroxy-β-methylbutyrate on miRNA expression in differentiating equine satellite cells exposed to hydrogen peroxide

Karolina Chodkowska (5077964)
Anna Ciecierska (4815738)
Kinga Majchrzak (468125)
Piotr Ostaszewski (5077961)
Tomasz Sadkowski (4815744)

April 2018

Table S2. Biological function of differentially expressed genes (DEG). (XLSX 28 kb

iAF cells undergo H2O2-induced senescence.

Aaryn Montgomery-Song (17743233)
Sajjad Ashraf (529605)
Paul Santerre (17743236)
Rita Kandel (6909809)

January 2024

(A) Representative phase contrast images and quantification of senescence associated β-galactosidase...

Additional file 4: of HER2 regulates HIF-2α and drives an increased hypoxic response in breast cancer

Edward Jarman (6253052)
Carol Ward (693454)
Arran Turnbull (5337878)
Carlos Martinez-Perez (4318249)
James Meehan (6253055)
Chrysi Xintaropoulou (5337881)
Andrew Sims (3455423)
Simon Langdon (2163259)

January 2019

Figure S4. HER2-driven hypoxic expression of HIF-2α-specific target genes. The expression levels of ...

Additional file 3: of Genome-independent hypoxic repression of estrogen receptor alpha in breast cancer cells

Mercè Padró (3848701)
Raymond Louie (3848704)
Brian Lananna (3848713)
Adam Krieg (3848707)
Luika Timmerman (3848716)
Denise Chan (3848710)

March 2017

(A) qPCR analysis of mRNA levels of ESR1 and HIF1A at normoxia (N) or hypoxia (H) (1% O2, 24 h) trea...

Additional file 2: of HER2 regulates HIF-2α and drives an increased hypoxic response in breast cancer

Edward Jarman (6253052)
Carol Ward (693454)
Arran Turnbull (5337878)
Carlos Martinez-Perez (4318249)
James Meehan (6253055)
Chrysi Xintaropoulou (5337881)
Andrew Sims (3455423)
Simon Langdon (2163259)

January 2019

Figure S2. HIF2A expression is higher in cell lines with high HER2 expression. A cell line data set ...

Additional file 2: of Using in vivo oxidation status of one- and two-component redox relays to determine H2O2 levels linked to signaling and toxicity

Alba Domènech (4166935)
José Ayté (51457)
Fernando Antunes (3088005)
Elena Hidalgo (51458)

June 2018

Figure S2. Kinetics of OxyR and Tpx1 oxidation. a In cells deficient in Tpx1 or Trx1, HA-OxyR oxidiz...

Hydrogen Peroxide–Induced Gene Expression across Kingdoms: A Comparative Analysis

Korneel V
Steven Robbens
Klaas V
Yves Van De
Frank Van Breusegem

March 2015

Cells react to oxidative stress conditions by launching a defense response through the induction of ...

Differential resistance of human embryonic stem cells and somatic cell types to hydrogen peroxide-induced genotoxicity may be dependent on innate basal intracellular ROS levels

Vinoth, Kumar Jayaseelan
Manikandan, Jayapal
Sethu, Swaminathan
Balakrishnan, Lakshmidevi
Heng, Alexis
Lu, Kai
Poonepalli, Anuradha
Hande, Manoor Prakash
Cao, Tong

July 2015

Previously, we demonstrated that undifferentiated human embryonic stem cells (hESC) displayed higher...

Time series analysis of oxidative stress response patterns in HepG2: A toxicogenomics approach

Deferme, L.
Briede, J. J.
Claessen, S. M. H.
Jennen, D. G. J.
Cavil, R.
Kleinjans, J. C. S.

April 2013

Oxidative stress plays an important role in chemically induced liver injury, however, our insight in...

Additional file 2: of Variable gene transcription underlies phenotypic convergence of hypoxia tolerance in sculpins

Milica Mandic (3282924)
Marina Ramon (5927120)
Aleeza Gerstein (3702970)
Andrew Gracey (77610)
Jeffrey Richards (3357743)

November 2018

Figure S2. Transcript levels of genes associated with metabolism. Colours and symbols represent diff...

Additional file 3: Figure S2. of Global gene expression profiling and senescence biomarker analysis of hESC exposed to H2O2 induced non-cytotoxic oxidative stress

Abstract

Extracted data

Additional file 3: Figure S2. of Global gene expression profiling and senescence biomarker analysis of hESC exposed to H2O2 induced non-cytotoxic oxidative stress

Abstract

Extracted data

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