<p>A) Length and B) average level of expression between S1 and S2 in units of log10(TPM) (TPM = transcripts per million) for all Trinity transcripts (n = 400,584) and the subset of Trinity transcripts with Swiss-Prot BlastX homology (n = 63,242).</p
Six main clusters (a to f) having similar expression patterns in four tissues were extracted by Trin...
Each row is an individual, with individuals from the 5,000 m site indicated in blue, the 4,000 m sit...
a<p>N50 and N90 are defined as the length of the smallest contig N in the sorted list of all contigs...
<p>Lengths of the assembled transcripts from Trinity for the <i>de novo</i> transcriptome.</p
<p>The x-axis indicates expression levels from 0 TPM to 100 TPM with a bin size of 1 and from 101 to...
a<p>Transcript expression level in reads per kilobase per million mapped reads. Given is the average...
<p>TPM: transcripts per million. The dashed line in the figure indicates that the abundances for mos...
<p>Expression profiles of three transcripts for gene FBgn0067864; the average expression profile ove...
<p>Gene expression level was determined by calculating the number of unambiguous tags for each gene ...
<p>The last bin sums from the expression levels 1000 to 50,000. The expression levels were measured ...
<p>Length distribution of the transcripts assembled with Cufflinks, Trinity, and Oases.</p
<p>Number of contigs is prior to filtering by BLAST to remove potentially misassembled contigs.</p
<p>Abundance values (average of log2 MII/MI from three biological replicates) and transcripts with s...
<p>The <i>P</i>-value of <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.00789...
<p>The <i>P</i>-value of <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.00789...
Six main clusters (a to f) having similar expression patterns in four tissues were extracted by Trin...
Each row is an individual, with individuals from the 5,000 m site indicated in blue, the 4,000 m sit...
a<p>N50 and N90 are defined as the length of the smallest contig N in the sorted list of all contigs...
<p>Lengths of the assembled transcripts from Trinity for the <i>de novo</i> transcriptome.</p
<p>The x-axis indicates expression levels from 0 TPM to 100 TPM with a bin size of 1 and from 101 to...
a<p>Transcript expression level in reads per kilobase per million mapped reads. Given is the average...
<p>TPM: transcripts per million. The dashed line in the figure indicates that the abundances for mos...
<p>Expression profiles of three transcripts for gene FBgn0067864; the average expression profile ove...
<p>Gene expression level was determined by calculating the number of unambiguous tags for each gene ...
<p>The last bin sums from the expression levels 1000 to 50,000. The expression levels were measured ...
<p>Length distribution of the transcripts assembled with Cufflinks, Trinity, and Oases.</p
<p>Number of contigs is prior to filtering by BLAST to remove potentially misassembled contigs.</p
<p>Abundance values (average of log2 MII/MI from three biological replicates) and transcripts with s...
<p>The <i>P</i>-value of <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.00789...
<p>The <i>P</i>-value of <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.00789...
Six main clusters (a to f) having similar expression patterns in four tissues were extracted by Trin...
Each row is an individual, with individuals from the 5,000 m site indicated in blue, the 4,000 m sit...
a<p>N50 and N90 are defined as the length of the smallest contig N in the sorted list of all contigs...