Additional file 5: Table S3. of Lack of satellite DNA species-specific homogenization and relationship to chromosomal rearrangements in monitor lizards (Varanidae, Squamata)

Additional file 5: Table S6. of Integration of molecular cytogenetics, dated molecular phylogeny, and model-based predictions to understand the extreme chromosome reorganization in the Neotropical genus Tonatia (Chiroptera: Phyllostomidae)

Cibele Sotero-Caio (3439697)
Marianne Volleth (252086)
Federico Hoffmann (3439694)
LuAnn Scott (589098)
Holly Wichman (589099)
Fengtang Yang (45334)
Robert Baker (241026)

October 2015

Long term effective population size (Ne) estimations using Lande (1979) model and the calculated rat...

Additional file 1: of Madagascar ground gecko genome analysis characterizes asymmetric fates of duplicated genes

Yuichiro Hara (3435893)
Miki Takeuchi (811652)
Yuka Kageyama (5107127)
Kaori Tatsumi (3435890)
Masahiko Hibi (115027)
Hiroshi Kiyonari (106447)
Shigehiro Kuraku (2968)

April 2018

Supplementary text, Supplementary methods, Tables S1âS14. Table S1. Summary of the genomic DNA seq...

Additional file 3: of Where does diversity come from? Linking geographical patterns of morphological, genetic, and environmental variation in wall lizards

Antigoni Kaliontzopoulou (502645)
Catarina Pinho (89687)
Fernando Martínez-Freiría (229003)

August 2018

Geographic coordinates in the WGS1984 system, number of individuals sampled per sex (Nm: males, Nf: ...

Additional file 1: Table S1. of Lack of satellite DNA species-specific homogenization and relationship to chromosomal rearrangements in monitor lizards (Varanidae, Squamata)

Ornjira Prakhongcheep (4371571)
Watcharaporn Thapana (4371565)
Aorarat Suntronpong (2921715)
Worapong Singchat (2921718)
Khampee Pattanatanang (4371562)
Rattanin Phatcharakullawarawat (4371568)
Narongrit Muangmai (3375794)
Surin Peyachoknagul (2921700)
Kazumi Matsubara (106278)
Tariq Ezaz (553532)
Kornsorn Srikulnath (640675)

August 2017

Fluorescence in situ hybridization mapping used randomly selected VSAREP clones from each VSAREP sub...

Additional file 8: Figure S4. of Lack of satellite DNA species-specific homogenization and relationship to chromosomal rearrangements in monitor lizards (Varanidae, Squamata)

Ornjira Prakhongcheep (4371571)
Watcharaporn Thapana (4371565)
Aorarat Suntronpong (2921715)
Worapong Singchat (2921718)
Khampee Pattanatanang (4371562)
Rattanin Phatcharakullawarawat (4371568)
Narongrit Muangmai (3375794)
Surin Peyachoknagul (2921700)
Kazumi Matsubara (106278)
Tariq Ezaz (553532)
Kornsorn Srikulnath (640675)

August 2017

Statistical parsimony network of VSAREP subfamilyÂ II constructed from all VSAREP sequence units of ...

Additional file 1: of Multiple interspecific hybridization and microsatellite mutations provide clonal diversity in the parthenogenetic rock lizard Darevskia armeniaca

Anastasiya Girnyk (6164447)
Andrey Vergun (6164453)
Seraphima Semyenova (6164456)
Andrei Guliaev (6164459)
Marine Arakelyan (842556)
Felix Danielyan (6164468)
Irena Martirosyan (4090114)
Robert Murphy (334253)
Alexey Ryskov (3496220)

December 2018

Table S1. Allelic variations of microsatellite containing loci in the lizard species D. armeniaca, D...

Lack of satellite DNA species-specific homogenization and relationship to chromosomal rearrangements in monitor lizards (Varanidae, Squamata)

Ornjira Prakhongcheep
Watcharaporn Thapana
Aorarat Suntronpong
Worapong Singchat
Khampee Pattanatanang
Rattanin Phatcharakullawarawat
Narongrit Muangmai
Surin Peyachoknagul
Kazumi Matsubara
Tariq Ezaz
Kornsorn Srikulnath

August 2017

Abstract Background Satellite DNAs (stDNAs) are highly repeated sequences that constitute large port...

Additional file 1: of Factors affecting interspecific differences in genetic divergence among populations of Anolis lizards in Cuba

Antonio Cádiz (5010044)
Nobuaki Nagata (2933724)
Luis Díaz (4671034)
Yukari Suzuki-Ohno (2933727)
Lázaro Echenique-Díaz (5618630)
Hiroshi Akashi (35384)
Takashi Makino (3048)
Masakado Kawata (26521)

August 2018

Table S1. (a) Location data and GenBank accession numbers of the Cuban specimens used in this study....

Additional file 6: Table S3. of Digging up the roots of an insular hotspot of genetic diversity: decoupled mito-nuclear histories in the evolution of the Corsican-Sardinian endemic lizard Podarcis tiliguerta

Daniele Salvi (314127)
Catarina Pinho (89687)
D. Harris (3507287)

March 2017

Result of analyses of molecular variance (AMOVA) based on partitions defined by mtDNA variation of P...

Additional file 3: of Multiple interspecific hybridization and microsatellite mutations provide clonal diversity in the parthenogenetic rock lizard Darevskia armeniaca

Anastasiya Girnyk (6164447)
Andrey Vergun (6164453)
Seraphima Semyenova (6164456)
Andrei Guliaev (6164459)
Marine Arakelyan (842556)
Felix Danielyan (6164468)
Irena Martirosyan (4090114)
Robert Murphy (334253)
Alexey Ryskov (3496220)

December 2018

Table S3. Indices of association in four populations of D. valentini. (PDF 347 kb

Additional file 8: of Where does diversity come from? Linking geographical patterns of morphological, genetic, and environmental variation in wall lizards

Antigoni Kaliontzopoulou (502645)
Catarina Pinho (89687)
Fernando Martínez-Freiría (229003)

August 2018

Individual multilocus genotypes for the nine microsatellite loci. Each allele is coded as its length...

Additional file 2: of Factors affecting interspecific differences in genetic divergence among populations of Anolis lizards in Cuba

Antonio Cádiz (5010044)
Nobuaki Nagata (2933724)
Luis Díaz (4671034)
Yukari Suzuki-Ohno (2933727)
Lázaro Echenique-Díaz (5618630)
Hiroshi Akashi (35384)
Takashi Makino (3048)
Masakado Kawata (26521)

August 2018

Figure S1. Bayesian tree (50% majority consensus) based on three genes using 303 individuals from 33...

Additional file 2: of Multiple interspecific hybridization and microsatellite mutations provide clonal diversity in the parthenogenetic rock lizard Darevskia armeniaca

Anastasiya Girnyk (6164447)
Andrey Vergun (6164453)
Seraphima Semyenova (6164456)
Andrei Guliaev (6164459)
Marine Arakelyan (842556)
Felix Danielyan (6164468)
Irena Martirosyan (4090114)
Robert Murphy (334253)
Alexey Ryskov (3496220)

December 2018

Table S2. The population indices of gene diversity for four studied loci in twelve sampled populatio...

Additional file 4: of On and off the rocks: persistence and ecological diversification in a tropical Australian lizard radiation

Paul Oliver (3334533)
Lauren Ashman (5423753)
Sarah Bank (4519429)
Rebecca Laver (590340)
Renae Pratt (3272298)
Leonardo Tedeschi (6492473)
Craig Moritz (33597)

March 2019

Table S1. Net Tamura-Nei corrected genetic divergences amongst major mtDNA lineages. Table S2. Summa...

Additional file 6: Table S5. of Environment, but not genetic divergence, influences geographic variation in colour morph frequencies in a lizard

Claire McLean (3552074)
Devi Stuart-Fox (272588)
Adnan Moussalli (272589)

August 2015

Pairwise corrected FST between Aroona (A), Wilpena (W), Yourambulla Caves (YC), Warren Gorge (WG), D...

Additional file 5: Table S6. of Integration of molecular cytogenetics, dated molecular phylogeny, and model-based predictions to understand the extreme chromosome reorganization in the Neotropical genus Tonatia (Chiroptera: Phyllostomidae)

Cibele Sotero-Caio (3439697)
Marianne Volleth (252086)
Federico Hoffmann (3439694)
LuAnn Scott (589098)
Holly Wichman (589099)
Fengtang Yang (45334)
Robert Baker (241026)

October 2015

Long term effective population size (Ne) estimations using Lande (1979) model and the calculated rat...

Additional file 1: of Madagascar ground gecko genome analysis characterizes asymmetric fates of duplicated genes

Yuichiro Hara (3435893)
Miki Takeuchi (811652)
Yuka Kageyama (5107127)
Kaori Tatsumi (3435890)
Masahiko Hibi (115027)
Hiroshi Kiyonari (106447)
Shigehiro Kuraku (2968)

April 2018

Supplementary text, Supplementary methods, Tables S1âS14. Table S1. Summary of the genomic DNA seq...

Additional file 3: of Where does diversity come from? Linking geographical patterns of morphological, genetic, and environmental variation in wall lizards

Antigoni Kaliontzopoulou (502645)
Catarina Pinho (89687)
Fernando Martínez-Freiría (229003)

August 2018

Geographic coordinates in the WGS1984 system, number of individuals sampled per sex (Nm: males, Nf: ...

Additional file 1: Table S1. of Lack of satellite DNA species-specific homogenization and relationship to chromosomal rearrangements in monitor lizards (Varanidae, Squamata)

Ornjira Prakhongcheep (4371571)
Watcharaporn Thapana (4371565)
Aorarat Suntronpong (2921715)
Worapong Singchat (2921718)
Khampee Pattanatanang (4371562)
Rattanin Phatcharakullawarawat (4371568)
Narongrit Muangmai (3375794)
Surin Peyachoknagul (2921700)
Kazumi Matsubara (106278)
Tariq Ezaz (553532)
Kornsorn Srikulnath (640675)

August 2017

Fluorescence in situ hybridization mapping used randomly selected VSAREP clones from each VSAREP sub...

Additional file 8: Figure S4. of Lack of satellite DNA species-specific homogenization and relationship to chromosomal rearrangements in monitor lizards (Varanidae, Squamata)

Ornjira Prakhongcheep (4371571)
Watcharaporn Thapana (4371565)
Aorarat Suntronpong (2921715)
Worapong Singchat (2921718)
Khampee Pattanatanang (4371562)
Rattanin Phatcharakullawarawat (4371568)
Narongrit Muangmai (3375794)
Surin Peyachoknagul (2921700)
Kazumi Matsubara (106278)
Tariq Ezaz (553532)
Kornsorn Srikulnath (640675)

August 2017

Statistical parsimony network of VSAREP subfamilyÂ II constructed from all VSAREP sequence units of ...

Additional file 1: of Multiple interspecific hybridization and microsatellite mutations provide clonal diversity in the parthenogenetic rock lizard Darevskia armeniaca

Anastasiya Girnyk (6164447)
Andrey Vergun (6164453)
Seraphima Semyenova (6164456)
Andrei Guliaev (6164459)
Marine Arakelyan (842556)
Felix Danielyan (6164468)
Irena Martirosyan (4090114)
Robert Murphy (334253)
Alexey Ryskov (3496220)

December 2018

Table S1. Allelic variations of microsatellite containing loci in the lizard species D. armeniaca, D...

Lack of satellite DNA species-specific homogenization and relationship to chromosomal rearrangements in monitor lizards (Varanidae, Squamata)

Ornjira Prakhongcheep
Watcharaporn Thapana
Aorarat Suntronpong
Worapong Singchat
Khampee Pattanatanang
Rattanin Phatcharakullawarawat
Narongrit Muangmai
Surin Peyachoknagul
Kazumi Matsubara
Tariq Ezaz
Kornsorn Srikulnath

August 2017

Abstract Background Satellite DNAs (stDNAs) are highly repeated sequences that constitute large port...

Additional file 1: of Factors affecting interspecific differences in genetic divergence among populations of Anolis lizards in Cuba

Antonio Cádiz (5010044)
Nobuaki Nagata (2933724)
Luis Díaz (4671034)
Yukari Suzuki-Ohno (2933727)
Lázaro Echenique-Díaz (5618630)
Hiroshi Akashi (35384)
Takashi Makino (3048)
Masakado Kawata (26521)

August 2018

Table S1. (a) Location data and GenBank accession numbers of the Cuban specimens used in this study....

Additional file 6: Table S3. of Digging up the roots of an insular hotspot of genetic diversity: decoupled mito-nuclear histories in the evolution of the Corsican-Sardinian endemic lizard Podarcis tiliguerta

Daniele Salvi (314127)
Catarina Pinho (89687)
D. Harris (3507287)

March 2017

Result of analyses of molecular variance (AMOVA) based on partitions defined by mtDNA variation of P...

Additional file 3: of Multiple interspecific hybridization and microsatellite mutations provide clonal diversity in the parthenogenetic rock lizard Darevskia armeniaca

Anastasiya Girnyk (6164447)
Andrey Vergun (6164453)
Seraphima Semyenova (6164456)
Andrei Guliaev (6164459)
Marine Arakelyan (842556)
Felix Danielyan (6164468)
Irena Martirosyan (4090114)
Robert Murphy (334253)
Alexey Ryskov (3496220)

December 2018

Table S3. Indices of association in four populations of D. valentini. (PDF 347 kb

Additional file 8: of Where does diversity come from? Linking geographical patterns of morphological, genetic, and environmental variation in wall lizards

Antigoni Kaliontzopoulou (502645)
Catarina Pinho (89687)
Fernando Martínez-Freiría (229003)

August 2018

Individual multilocus genotypes for the nine microsatellite loci. Each allele is coded as its length...

Additional file 2: of Factors affecting interspecific differences in genetic divergence among populations of Anolis lizards in Cuba

Antonio Cádiz (5010044)
Nobuaki Nagata (2933724)
Luis Díaz (4671034)
Yukari Suzuki-Ohno (2933727)
Lázaro Echenique-Díaz (5618630)
Hiroshi Akashi (35384)
Takashi Makino (3048)
Masakado Kawata (26521)

August 2018

Figure S1. Bayesian tree (50% majority consensus) based on three genes using 303 individuals from 33...

Additional file 2: of Multiple interspecific hybridization and microsatellite mutations provide clonal diversity in the parthenogenetic rock lizard Darevskia armeniaca

Anastasiya Girnyk (6164447)
Andrey Vergun (6164453)
Seraphima Semyenova (6164456)
Andrei Guliaev (6164459)
Marine Arakelyan (842556)
Felix Danielyan (6164468)
Irena Martirosyan (4090114)
Robert Murphy (334253)
Alexey Ryskov (3496220)

December 2018

Table S2. The population indices of gene diversity for four studied loci in twelve sampled populatio...

Additional file 4: of On and off the rocks: persistence and ecological diversification in a tropical Australian lizard radiation

Paul Oliver (3334533)
Lauren Ashman (5423753)
Sarah Bank (4519429)
Rebecca Laver (590340)
Renae Pratt (3272298)
Leonardo Tedeschi (6492473)
Craig Moritz (33597)

March 2019

Table S1. Net Tamura-Nei corrected genetic divergences amongst major mtDNA lineages. Table S2. Summa...

Additional file 6: Table S5. of Environment, but not genetic divergence, influences geographic variation in colour morph frequencies in a lizard

Claire McLean (3552074)
Devi Stuart-Fox (272588)
Adnan Moussalli (272589)

August 2015

Pairwise corrected FST between Aroona (A), Wilpena (W), Yourambulla Caves (YC), Warren Gorge (WG), D...

Additional file 5: Table S6. of Integration of molecular cytogenetics, dated molecular phylogeny, and model-based predictions to understand the extreme chromosome reorganization in the Neotropical genus Tonatia (Chiroptera: Phyllostomidae)

Cibele Sotero-Caio (3439697)
Marianne Volleth (252086)
Federico Hoffmann (3439694)
LuAnn Scott (589098)
Holly Wichman (589099)
Fengtang Yang (45334)
Robert Baker (241026)

October 2015

Long term effective population size (Ne) estimations using Lande (1979) model and the calculated rat...

Additional file 1: of Madagascar ground gecko genome analysis characterizes asymmetric fates of duplicated genes

Yuichiro Hara (3435893)
Miki Takeuchi (811652)
Yuka Kageyama (5107127)
Kaori Tatsumi (3435890)
Masahiko Hibi (115027)
Hiroshi Kiyonari (106447)
Shigehiro Kuraku (2968)

April 2018

Supplementary text, Supplementary methods, Tables S1âS14. Table S1. Summary of the genomic DNA seq...

Additional file 3: of Where does diversity come from? Linking geographical patterns of morphological, genetic, and environmental variation in wall lizards

Antigoni Kaliontzopoulou (502645)
Catarina Pinho (89687)
Fernando Martínez-Freiría (229003)

August 2018

Geographic coordinates in the WGS1984 system, number of individuals sampled per sex (Nm: males, Nf: ...

Additional file 5: Table S3. of Lack of satellite DNA species-specific homogenization and relationship to chromosomal rearrangements in monitor lizards (Varanidae, Squamata)

Abstract

Extracted data

Additional file 5: Table S3. of Lack of satellite DNA species-specific homogenization and relationship to chromosomal rearrangements in monitor lizards (Varanidae, Squamata)

Abstract

Extracted data

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