Additional file 4: Table S4. of Expression profiling of genes regulated by sphingosine kinase1 signaling in a murine model of hyperoxia induced neonatal bronchopulmonary dysplasia

Additional file 4: Table S4. of Consistent gene expression profiles in MexTAg transgenic mouse and wild type mouse asbestos-induced mesothelioma

Cleo Robinson (610365)
Ian Dick (3538622)
Michael Wise (3538409)
Andrew Holloway (21330)
Dileepa Diyagama (21327)
Bruce Robinson (147791)
Jenette Creaney (341814)
Richard Lake (3538619)

December 2015

List of differentially expressed genes in human mesothelioma compared with normal human mesothelial ...

Additional file 2 of Aberrant methylation of Serpine1 mediates lung injury in neonatal mice prenatally exposed to intrauterine inflammation

Dongting Yao (11928273)
Jiuru Zhao (9645539)
Qianqian Zhang (587342)
Tao Wang (12008)
Meng Ni (1622500)
Sudong Qi (13894284)
Qianwen Shen (9645536)
Wei Li (7081)
Baihe Li (12062210)
Xiya Ding (12062213)
Zhiwei Liu (13894287)

October 2022

Additional file 2: Figure S2. Genes expression levels in lung tissues of neonatal mice (A) The mRNA ...

Additional file 2: Table S2. of Consistent gene expression profiles in MexTAg transgenic mouse and wild type mouse asbestos-induced mesothelioma

Cleo Robinson (610365)
Ian Dick (3538622)
Michael Wise (3538409)
Andrew Holloway (21330)
Dileepa Diyagama (21327)
Bruce Robinson (147791)
Jenette Creaney (341814)
Richard Lake (3538619)

December 2015

List of differentially expressed genes in ascending order of fold difference in hiTAgtu compared to ...

Additional file 2: Table S2. of Expression profiling of genes regulated by sphingosine kinase1 signaling in a murine model of hyperoxia induced neonatal bronchopulmonary dysplasia

Viswanathan Natarajan (307479)
Alison Ha (4398922)
Yangbasai Dong (4398907)
Narsa Reddy (4398913)
David Ebenezer (4398916)
Prasad Kanteti (282579)
Sekhar Reddy (4398925)
J. Usha Raj (4398904)
Zhengdeng Lei (4398919)
Mark Maienschein-Cline (707294)
Zarema Arbieva (4398910)
Anantha Harijith (411401)

August 2017

Top fifty enriched pathways are listed here by cluster. The process of clustering is explained in th...

Additional file 1: of The therapeutic effect of mesenchymal stem cells on pulmonary myeloid cells following neonatal hyperoxic lung injury in mice

Ali Al-Rubaie (5354600)
Andrea Wise (5354594)
Foula Sozo (3149886)
Robert De Matteo (5354597)
Chrishan Samuel (5354588)
Richard Harding (173607)
Sharon Ricardo (5354591)

June 2018

Table S1. Table showing the most differentially expressed genes in isolated macrophages from lungs o...

Additional File 1:

Claudia Preston (5319473)
Saranya Wyles (5319470)
Santiago Reyes (4039796)
Emily Storm (5319482)
Bruce Eckloff (5319479)
Randolph Faustino (5319476)

May 2018

Table S1. Pathway Enrichment Analysis of Upregulated Genes. Table S2. Pathway Enrichment Analysis of...

Additional file 1: of Muscle-specific regulation of right ventricular transcriptional responses to chronic hypoxia-induced hypertrophy by the muscle ring finger-1 (MuRF1) ubiquitin ligase in mice

Robert Oakley (5778983)
Matthew Campen (3567395)
Michael Paffett (5778986)
Xin Chen (14149)
Zhongjing Wang (5778989)
Traci Parry (3473267)
Carolyn Hillhouse (5778992)
John Cidlowski (4516567)
Monte Willis (279465)

September 2018

Table S1. Differentially expressed genes in MuRF1â/â mice challenged with hypoxia (XLSX 59 kb

Additional file 1: of Transforming growth factor beta1 targets estrogen receptor signaling in bronchial epithelial cells

L. Cody Smith (5704958)
Santiago Moreno (90184)
Lauren Robertson (5704961)
Sarah Robinson (50404)
Kristal Gant (5704964)
Andrew Bryant (5704967)
Tara Sabo-Attwood (1929190)

August 2018

Table S1. Genes differentially expressed (FDR-corrected p-value < 0.05) in TGFB1 group compared to v...

Additional file 4: of Expression of epigenetic machinery genes is sensitive to maternal obesity and weight loss in relation to fetal growth in mice

Polina Panchenko (3455621)
Sarah Voisin (695350)
Mélanie Jouin (350278)
Luc Jouneau (104380)
Audrey Prézelin (3455618)
Simon Lecoutre (3455624)
Christophe Breton (234677)
Hélène Jammes (83224)
Claudine Junien (122221)
Anne Gabory (122171)

February 2016

Expression level and adjusted P values of 92 genes in the fetal liver, placental labyrinth, and junc...

Additional file 4: Table S4. of Epigenetic modifying enzyme expression in asthmatic airway epithelial cells and fibroblasts

Dorota Stefanowicz (137378)
Jari Ullah (3703243)
Kevin Lee (96151)
Furquan Shaheen (152799)
Ekiomoado Olumese (3703246)
Nick Fishbane (517664)
Hyun-Kyoung Koo (3703240)
Teal Hallstrand (3703237)
Darryl Knight (217282)
Tillie-Louise Hackett (92016)

January 2017

Comparison of epigenetic modifier gene expression between airway epithelial cells from asthmatic and...

Additional file 4: of Deficiency of the BMP Type I receptor ALK3 partly protects mice from anemia of inflammation

Inka Gallitz (2873273)
Niklas Lofruthe (2873264)
Lisa Traeger (2873267)
Nicole Bäumer (214974)
Verena Hoerr (630589)
Cornelius Faber (45045)
Tanja Kuhlmann (377301)
Carsten Müller-Tidow (105305)
Andrea Steinbicker (4889536)

February 2018

Hepatocyte-specific Alk3 deficiency resulted in suppressed liver Alk3 and hepcidin mRNA expression. ...

Additional file 4: Table S3. of Genes associated with polymorphic variants predicting lung function are differentially expressed during human lung development

S. Miller (3494552)
E. MelĂŠn (3494567)
S. Merid (3494555)
I. Hall (3494546)
I. Sayers (3494558)

July 2016

Lung function associated genes with significantly different expression during lung development. Affy...

Additional file 1: of In vivo genome and base editing of a human PCSK9 knock-in hypercholesterolemic mouse model

Alba Carreras (6210875)
Luna Pane (6163538)
Roberto Nitsch (6210878)
Katja Madeyski-Bengtson (4452094)
Michelle Porritt (5940611)
Pinar Akcakaya (6210881)
Amir Taheri-Ghahfarokhi (6210884)
Elke Ericson (52165)
Mikael Bjursell (274867)
Marta Perez-Alcazar (6210887)
Frank Seeliger (261686)
Magnus Althage (4347592)
Ralph Knöll (799981)
Ryan Hicks (4579402)
Lorenz Mayr (6210893)
Rosie Perkins (3179886)
Daniel Lindén (483184)
Jan Borén (119843)
Mohammad Bohlooly-Y (217638)
Marcello Maresca (5556467)

January 2019

Figure S1. Liver-specific expression of human PCSK9 in the hPCSK9-KI mouse model. (a) Representative...

Additional file 4: Table S4. of Differential expression of the Nrf2-linked genes in pediatric septic shock

Jocelyn Grunwell (3564215)
Scott Weiss (16457)
Natalie Cvijanovich (3564200)
Geoffrey Allen (3564209)
Neal Thomas (441332)
Robert Freishtat (3126909)
Nick Anas (516384)
Keith Meyer (309742)
Paul Checchia (3564206)
Thomas Shanley (3564203)
Michael Bigham (3564212)
Julie Fitzgerald (3562409)
Kelli Howard (658414)
Erin Frank (658415)
Kelli Harmon (534863)
Hector Wong (3564218)

September 2015

List of Nrf2-linked gene probes (n =138) corresponding to 92 unique genes differentially regulated b...

Additional file 1: of Bortezomib treatment induces a higher mortality rate in lupus model mice with a higher disease activity

Tomoko Ikeda (816958)
Hiroshi Fujii (289510)
Masato Nose (1272312)
Yukiko Kamogawa (4351870)
Tsuyoshi Shirai (3938939)
Yuko Shirota (4351867)
Tomonori Ishii (186302)
Hideo Harigae (133506)

August 2017

is a table presenting significantly upregulated and downregulated genes in spleens of Bz-treated and...

Additional file 4: Table S4. of Consistent gene expression profiles in MexTAg transgenic mouse and wild type mouse asbestos-induced mesothelioma

Cleo Robinson (610365)
Ian Dick (3538622)
Michael Wise (3538409)
Andrew Holloway (21330)
Dileepa Diyagama (21327)
Bruce Robinson (147791)
Jenette Creaney (341814)
Richard Lake (3538619)

December 2015

List of differentially expressed genes in human mesothelioma compared with normal human mesothelial ...

Additional file 2 of Aberrant methylation of Serpine1 mediates lung injury in neonatal mice prenatally exposed to intrauterine inflammation

Dongting Yao (11928273)
Jiuru Zhao (9645539)
Qianqian Zhang (587342)
Tao Wang (12008)
Meng Ni (1622500)
Sudong Qi (13894284)
Qianwen Shen (9645536)
Wei Li (7081)
Baihe Li (12062210)
Xiya Ding (12062213)
Zhiwei Liu (13894287)

October 2022

Additional file 2: Figure S2. Genes expression levels in lung tissues of neonatal mice (A) The mRNA ...

Additional file 2: Table S2. of Consistent gene expression profiles in MexTAg transgenic mouse and wild type mouse asbestos-induced mesothelioma

Cleo Robinson (610365)
Ian Dick (3538622)
Michael Wise (3538409)
Andrew Holloway (21330)
Dileepa Diyagama (21327)
Bruce Robinson (147791)
Jenette Creaney (341814)
Richard Lake (3538619)

December 2015

List of differentially expressed genes in ascending order of fold difference in hiTAgtu compared to ...

Additional file 2: Table S2. of Expression profiling of genes regulated by sphingosine kinase1 signaling in a murine model of hyperoxia induced neonatal bronchopulmonary dysplasia

Viswanathan Natarajan (307479)
Alison Ha (4398922)
Yangbasai Dong (4398907)
Narsa Reddy (4398913)
David Ebenezer (4398916)
Prasad Kanteti (282579)
Sekhar Reddy (4398925)
J. Usha Raj (4398904)
Zhengdeng Lei (4398919)
Mark Maienschein-Cline (707294)
Zarema Arbieva (4398910)
Anantha Harijith (411401)

August 2017

Top fifty enriched pathways are listed here by cluster. The process of clustering is explained in th...

Additional file 1: of The therapeutic effect of mesenchymal stem cells on pulmonary myeloid cells following neonatal hyperoxic lung injury in mice

Ali Al-Rubaie (5354600)
Andrea Wise (5354594)
Foula Sozo (3149886)
Robert De Matteo (5354597)
Chrishan Samuel (5354588)
Richard Harding (173607)
Sharon Ricardo (5354591)

June 2018

Table S1. Table showing the most differentially expressed genes in isolated macrophages from lungs o...

Additional File 1:

Claudia Preston (5319473)
Saranya Wyles (5319470)
Santiago Reyes (4039796)
Emily Storm (5319482)
Bruce Eckloff (5319479)
Randolph Faustino (5319476)

May 2018

Table S1. Pathway Enrichment Analysis of Upregulated Genes. Table S2. Pathway Enrichment Analysis of...

Additional file 1: of Muscle-specific regulation of right ventricular transcriptional responses to chronic hypoxia-induced hypertrophy by the muscle ring finger-1 (MuRF1) ubiquitin ligase in mice

Robert Oakley (5778983)
Matthew Campen (3567395)
Michael Paffett (5778986)
Xin Chen (14149)
Zhongjing Wang (5778989)
Traci Parry (3473267)
Carolyn Hillhouse (5778992)
John Cidlowski (4516567)
Monte Willis (279465)

September 2018

Table S1. Differentially expressed genes in MuRF1â/â mice challenged with hypoxia (XLSX 59 kb

Additional file 1: of Transforming growth factor beta1 targets estrogen receptor signaling in bronchial epithelial cells

L. Cody Smith (5704958)
Santiago Moreno (90184)
Lauren Robertson (5704961)
Sarah Robinson (50404)
Kristal Gant (5704964)
Andrew Bryant (5704967)
Tara Sabo-Attwood (1929190)

August 2018

Table S1. Genes differentially expressed (FDR-corrected p-value < 0.05) in TGFB1 group compared to v...

Additional file 4: of Expression of epigenetic machinery genes is sensitive to maternal obesity and weight loss in relation to fetal growth in mice

Polina Panchenko (3455621)
Sarah Voisin (695350)
Mélanie Jouin (350278)
Luc Jouneau (104380)
Audrey Prézelin (3455618)
Simon Lecoutre (3455624)
Christophe Breton (234677)
Hélène Jammes (83224)
Claudine Junien (122221)
Anne Gabory (122171)

February 2016

Expression level and adjusted P values of 92 genes in the fetal liver, placental labyrinth, and junc...

Additional file 4: Table S4. of Epigenetic modifying enzyme expression in asthmatic airway epithelial cells and fibroblasts

Dorota Stefanowicz (137378)
Jari Ullah (3703243)
Kevin Lee (96151)
Furquan Shaheen (152799)
Ekiomoado Olumese (3703246)
Nick Fishbane (517664)
Hyun-Kyoung Koo (3703240)
Teal Hallstrand (3703237)
Darryl Knight (217282)
Tillie-Louise Hackett (92016)

January 2017

Comparison of epigenetic modifier gene expression between airway epithelial cells from asthmatic and...

Additional file 4: of Deficiency of the BMP Type I receptor ALK3 partly protects mice from anemia of inflammation

Inka Gallitz (2873273)
Niklas Lofruthe (2873264)
Lisa Traeger (2873267)
Nicole Bäumer (214974)
Verena Hoerr (630589)
Cornelius Faber (45045)
Tanja Kuhlmann (377301)
Carsten Müller-Tidow (105305)
Andrea Steinbicker (4889536)

February 2018

Hepatocyte-specific Alk3 deficiency resulted in suppressed liver Alk3 and hepcidin mRNA expression. ...

Additional file 4: Table S3. of Genes associated with polymorphic variants predicting lung function are differentially expressed during human lung development

S. Miller (3494552)
E. MelĂŠn (3494567)
S. Merid (3494555)
I. Hall (3494546)
I. Sayers (3494558)

July 2016

Lung function associated genes with significantly different expression during lung development. Affy...

Additional file 1: of In vivo genome and base editing of a human PCSK9 knock-in hypercholesterolemic mouse model

Alba Carreras (6210875)
Luna Pane (6163538)
Roberto Nitsch (6210878)
Katja Madeyski-Bengtson (4452094)
Michelle Porritt (5940611)
Pinar Akcakaya (6210881)
Amir Taheri-Ghahfarokhi (6210884)
Elke Ericson (52165)
Mikael Bjursell (274867)
Marta Perez-Alcazar (6210887)
Frank Seeliger (261686)
Magnus Althage (4347592)
Ralph Knöll (799981)
Ryan Hicks (4579402)
Lorenz Mayr (6210893)
Rosie Perkins (3179886)
Daniel Lindén (483184)
Jan Borén (119843)
Mohammad Bohlooly-Y (217638)
Marcello Maresca (5556467)

January 2019

Figure S1. Liver-specific expression of human PCSK9 in the hPCSK9-KI mouse model. (a) Representative...

Additional file 4: Table S4. of Differential expression of the Nrf2-linked genes in pediatric septic shock

Jocelyn Grunwell (3564215)
Scott Weiss (16457)
Natalie Cvijanovich (3564200)
Geoffrey Allen (3564209)
Neal Thomas (441332)
Robert Freishtat (3126909)
Nick Anas (516384)
Keith Meyer (309742)
Paul Checchia (3564206)
Thomas Shanley (3564203)
Michael Bigham (3564212)
Julie Fitzgerald (3562409)
Kelli Howard (658414)
Erin Frank (658415)
Kelli Harmon (534863)
Hector Wong (3564218)

September 2015

List of Nrf2-linked gene probes (n =138) corresponding to 92 unique genes differentially regulated b...

Additional file 1: of Bortezomib treatment induces a higher mortality rate in lupus model mice with a higher disease activity

Tomoko Ikeda (816958)
Hiroshi Fujii (289510)
Masato Nose (1272312)
Yukiko Kamogawa (4351870)
Tsuyoshi Shirai (3938939)
Yuko Shirota (4351867)
Tomonori Ishii (186302)
Hideo Harigae (133506)

August 2017

is a table presenting significantly upregulated and downregulated genes in spleens of Bz-treated and...

Additional file 4: Table S4. of Consistent gene expression profiles in MexTAg transgenic mouse and wild type mouse asbestos-induced mesothelioma

Cleo Robinson (610365)
Ian Dick (3538622)
Michael Wise (3538409)
Andrew Holloway (21330)
Dileepa Diyagama (21327)
Bruce Robinson (147791)
Jenette Creaney (341814)
Richard Lake (3538619)

December 2015

List of differentially expressed genes in human mesothelioma compared with normal human mesothelial ...

Additional file 2 of Aberrant methylation of Serpine1 mediates lung injury in neonatal mice prenatally exposed to intrauterine inflammation

Dongting Yao (11928273)
Jiuru Zhao (9645539)
Qianqian Zhang (587342)
Tao Wang (12008)
Meng Ni (1622500)
Sudong Qi (13894284)
Qianwen Shen (9645536)
Wei Li (7081)
Baihe Li (12062210)
Xiya Ding (12062213)
Zhiwei Liu (13894287)

October 2022

Additional file 2: Figure S2. Genes expression levels in lung tissues of neonatal mice (A) The mRNA ...

Additional file 2: Table S2. of Consistent gene expression profiles in MexTAg transgenic mouse and wild type mouse asbestos-induced mesothelioma

Cleo Robinson (610365)
Ian Dick (3538622)
Michael Wise (3538409)
Andrew Holloway (21330)
Dileepa Diyagama (21327)
Bruce Robinson (147791)
Jenette Creaney (341814)
Richard Lake (3538619)

December 2015

List of differentially expressed genes in ascending order of fold difference in hiTAgtu compared to ...

Additional file 4: Table S4. of Expression profiling of genes regulated by sphingosine kinase1 signaling in a murine model of hyperoxia induced neonatal bronchopulmonary dysplasia

Abstract

Extracted data

Additional file 4: Table S4. of Expression profiling of genes regulated by sphingosine kinase1 signaling in a murine model of hyperoxia induced neonatal bronchopulmonary dysplasia

Abstract

Extracted data

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