Additional file 3; Table S2. of Dissecting combining ability effect in a rice NCII-III population provides insights into heterosis in indica-japonica cross | ORKG Ask

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Additional file 7: Table S4. of Discovery and mapping of genomic regions governing economically important traits of Basmati rice

Lakshminarayana Vemireddy (3461612)
Sabahat Noor (3461618)
VV Satyavathi (3461630)
A Srividhya (3461609)
A Kaliappan (3461624)
SRN Parimala (3461639)
Prathibha Bharathi (3461627)
Dondapati Deborah (3461636)
KV Rao (3461621)
N Shobharani (3461633)
EA Siddiq (3461615)
Javaregowda Nagaraju (63235)

August 2015

Quantitative trait loci (QTLs) detected in F3 population of Basmati370/Jaya. (DOC 35 kb

Additional file 1: of Finding the superior allele of japonica-type for increasing stem lodging resistance in indica rice varieties using chromosome segment substitution lines

Indria Mulsanti (5119031)
Toshio Yamamoto (65296)
Tadamasa Ueda (5119034)
Ahmad Samadi (5119043)
Eri Kamahora (5119028)
Indrastuti Rumanti (5119022)
Vo Thanh (5119025)
Shunsuke Adachi (1351500)
Sakae Suzuki (5119040)
Motoki Kanekatsu (5119037)
Tadashi Hirasawa (4181440)
Taiichiro Ookawa (4181443)

April 2018

Figure S1. Graphical genotypes of the reciprocal CSSLs. (a) 41Â K-CSSLs, (b) 39Â T-CSSLs. Orange reg...

Additional file 1: of Genetic analysis for the grain number heterosis of a super-hybrid rice WFYT025 combination using RNA-Seq

Liang Chen (73736)
Jianmin Bian (381692)
Shilai Shi (5396249)
Jianfeng Yu (534713)
Hira Khanzada (5396243)
Ghulam Wassan (5396246)
Changlan Zhu (841292)
Xin Luo (428648)
Shan Tong (5258921)
Xiaorong Yang (265168)
Xiaosong Peng (841293)
Shuang Yong (5396240)
Qiuying Yu (5396252)
Xiaopeng He (841294)
Junru Fu (841295)
Xiaorong Chen (459651)
Lifang Hu (841297)
Linjuan Ouyang (841296)
Haohua He (841299)

June 2018

Figure S1. Scatterplots comparing gene expression scores from biological replicates of WFYT025 and i...

Additional file 3: of Genome-wide association study of agronomic traits in rice cultivated in temperate regions

Juan Reig-Valiente (3435071)
Luis Marqués (3435083)
Manuel Talón (52294)
Concha Domingo (3435080)

September 2018

Table S3. Number of alleles carried by the 20 plants with the highest and the lowest value for each ...

Additional file 2: Table S1. of Discovery and mapping of genomic regions governing economically important traits of Basmati rice

Lakshminarayana Vemireddy (3461612)
Sabahat Noor (3461618)
VV Satyavathi (3461630)
A Srividhya (3461609)
A Kaliappan (3461624)
SRN Parimala (3461639)
Prathibha Bharathi (3461627)
Dondapati Deborah (3461636)
KV Rao (3461621)
N Shobharani (3461633)
EA Siddiq (3461615)
Javaregowda Nagaraju (63235)

August 2015

Transgressive segregants, heterosis, heterobeltiosis and inbreeding depression for 18 traits in the ...

Additional file 1: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

Lin Chen (54305)
Yun Yuan (748928)
Jinwen Wu (3722080)
Zhixiong Chen (3115491)
Lan Wang (85307)
Muhammad Shahid (536390)
Xiangdong Liu (79858)

May 2019

Table S1. Heterosis analysis of hybrids generated by the crossing of T449 and neo-tetraploid rice li...

Additional file 2: of QTL mapping and candidate gene analysis of peduncle vascular bundle related traits in rice by genome-wide association study

Laiyuan Zhai (4917016)
Tianqing Zheng (635384)
Xinyu Wang (341591)
Yun Wang (32846)
Kai Chen (129938)
Shu Wang (180520)
Jianlong Xu (841260)
Zhikang Li (416310)

March 2018

Table S1. List of the 423 accessions including country of origin, subpopulation (indica, temperate j...

Additional file 2: of Genome sequencing of rice subspecies and genetic analysis of recombinant lines reveals regional yield- and quality-associated loci

Xiukun Li (4783458)
Lian Wu (166932)
Jiahong Wang (407742)
Jian Sun (27858)
Xiuhong Xia (4783461)
Xin Geng (571200)
Xuhong Wang (4783464)
Zhengjin Xu (4783467)
Quan Xu (554774)

September 2018

Figure S2. Collinearity between the bin map derived from the RIL population and the reference genome...

Additional file 6 of Genomic Architecture of Yield Performance of an Elite Rice Hybrid Revealed by its Derived Recombinant Inbred Line and Their Backcross Hybrid Populations

Fan Zhang (46132)
Conghe Zhang (13894154)
Xiuqin Zhao (142512)
Shuangbing Zhu (11244365)
Kai Chen (129938)
Guixiang Zhou (552998)
Zhichao Wu (410668)
Min Li (12799)
Tianqing Zheng (635384)
Wensheng Wang (142516)
Zhi Yan (317034)
Qinyong Fei (13894157)
Zhikang Li (416310)
Jinjie Chen (5003939)
Jianlong Xu (841260)

October 2022

Additional file 6: Table S3. Summary of 639 main-effect QTL affecting 12 traits identified in the co...

Additional file 5: Figure S5. of Detection of Novel QTLs Regulating Grain Size in Extra-Large Grain Rice (Oryza sativa L.) Lines

Shuhei Segami (3537926)
Tatsuya Yamamoto (586740)
Katsuyuki Oki (2163046)
Tomonori Noda (3537929)
Hiroyuki Kanamori (82111)
Harumi Sasaki (561894)
Satomi Mori (561895)
Motoyuki Ashikari (3465128)
Hidemi Kitano (524317)
Yuichi Katayose (3408902)
Yukimoto Iwasaki (3537920)
Kotaro Miura (3537923)

July 2016

Selection of segregation lines to evaluate the effect of quantitative trait loci (QTLs) detected on ...

Additional file 3: Table S1. of Identification of bakanae disease resistance loci in japonica rice through genome wide association study

Andrea Volante (141325)
Alessandro Tondelli (3167490)
Maria Aragona (4098790)
Maria Valente (4098793)
Chiara Biselli (114669)
Francesca Desiderio (2588137)
Paolo Bagnaresi (84939)
Slavica Matic (4098787)
Maria Gullino (3579608)
Alessandro Infantino (4098784)
Davide Spadaro (1525594)
Giampiero ValĂ¨ (3486386)

June 2017

Genetic diversity (A), Genetic divergence (FST) (B) and marker density (C) estimates computed for th...

Additional file 1: of Genome-Based Identification of Heterotic Patterns in Rice

Ulrike Beukert (4037831)
Zuo Li (4037840)
Guozheng Liu (441515)
Yusheng Zhao (388357)
Nadhigade Ramachandra (4037834)
Vilson Mirdita (4037837)
Fabiano Pita (4037828)
Klaus Pillen (563597)
Jochen Reif (3312300)

May 2017

for Genome-based identification of heterotic. Figure S1. Decay of linkage disequilibrium measured us...

Additional file 8: Table S5. of Discovery and mapping of genomic regions governing economically important traits of Basmati rice

Lakshminarayana Vemireddy (3461612)
Sabahat Noor (3461618)
VV Satyavathi (3461630)
A Srividhya (3461609)
A Kaliappan (3461624)
SRN Parimala (3461639)
Prathibha Bharathi (3461627)
Dondapati Deborah (3461636)
KV Rao (3461621)
N Shobharani (3461633)
EA Siddiq (3461615)
Javaregowda Nagaraju (63235)

August 2015

Quantitative trait loci (QTLs) detected in theÂ RIL population derived from Basmati370/Jaya. (DOC 38...

Additional file 7: Table S4. of Discovery and mapping of genomic regions governing economically important traits of Basmati rice

Lakshminarayana Vemireddy (3461612)
Sabahat Noor (3461618)
VV Satyavathi (3461630)
A Srividhya (3461609)
A Kaliappan (3461624)
SRN Parimala (3461639)
Prathibha Bharathi (3461627)
Dondapati Deborah (3461636)
KV Rao (3461621)
N Shobharani (3461633)
EA Siddiq (3461615)
Javaregowda Nagaraju (63235)

August 2015

Quantitative trait loci (QTLs) detected in F3 population of Basmati370/Jaya. (DOC 35 kb

Additional file 1: of Finding the superior allele of japonica-type for increasing stem lodging resistance in indica rice varieties using chromosome segment substitution lines

Indria Mulsanti (5119031)
Toshio Yamamoto (65296)
Tadamasa Ueda (5119034)
Ahmad Samadi (5119043)
Eri Kamahora (5119028)
Indrastuti Rumanti (5119022)
Vo Thanh (5119025)
Shunsuke Adachi (1351500)
Sakae Suzuki (5119040)
Motoki Kanekatsu (5119037)
Tadashi Hirasawa (4181440)
Taiichiro Ookawa (4181443)

April 2018

Figure S1. Graphical genotypes of the reciprocal CSSLs. (a) 41Â K-CSSLs, (b) 39Â T-CSSLs. Orange reg...

Additional file 1: of Genetic analysis for the grain number heterosis of a super-hybrid rice WFYT025 combination using RNA-Seq

Liang Chen (73736)
Jianmin Bian (381692)
Shilai Shi (5396249)
Jianfeng Yu (534713)
Hira Khanzada (5396243)
Ghulam Wassan (5396246)
Changlan Zhu (841292)
Xin Luo (428648)
Shan Tong (5258921)
Xiaorong Yang (265168)
Xiaosong Peng (841293)
Shuang Yong (5396240)
Qiuying Yu (5396252)
Xiaopeng He (841294)
Junru Fu (841295)
Xiaorong Chen (459651)
Lifang Hu (841297)
Linjuan Ouyang (841296)
Haohua He (841299)

June 2018

Figure S1. Scatterplots comparing gene expression scores from biological replicates of WFYT025 and i...

Additional file 2: Table S1. of Discovery and mapping of genomic regions governing economically important traits of Basmati rice

Lakshminarayana Vemireddy (3461612)
Sabahat Noor (3461618)
VV Satyavathi (3461630)
A Srividhya (3461609)
A Kaliappan (3461624)
SRN Parimala (3461639)
Prathibha Bharathi (3461627)
Dondapati Deborah (3461636)
KV Rao (3461621)
N Shobharani (3461633)
EA Siddiq (3461615)
Javaregowda Nagaraju (63235)

August 2015

Transgressive segregants, heterosis, heterobeltiosis and inbreeding depression for 18 traits in the ...

Additional file 1: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

Lin Chen (54305)
Yun Yuan (748928)
Jinwen Wu (3722080)
Zhixiong Chen (3115491)
Lan Wang (85307)
Muhammad Shahid (536390)
Xiangdong Liu (79858)

May 2019

Table S1. Heterosis analysis of hybrids generated by the crossing of T449 and neo-tetraploid rice li...

Additional file 2: of QTL mapping and candidate gene analysis of peduncle vascular bundle related traits in rice by genome-wide association study

Laiyuan Zhai (4917016)
Tianqing Zheng (635384)
Xinyu Wang (341591)
Yun Wang (32846)
Kai Chen (129938)
Shu Wang (180520)
Jianlong Xu (841260)
Zhikang Li (416310)

March 2018

Table S1. List of the 423 accessions including country of origin, subpopulation (indica, temperate j...

Additional file 2: of Genome sequencing of rice subspecies and genetic analysis of recombinant lines reveals regional yield- and quality-associated loci

Xiukun Li (4783458)
Lian Wu (166932)
Jiahong Wang (407742)
Jian Sun (27858)
Xiuhong Xia (4783461)
Xin Geng (571200)
Xuhong Wang (4783464)
Zhengjin Xu (4783467)
Quan Xu (554774)

September 2018

Figure S2. Collinearity between the bin map derived from the RIL population and the reference genome...

Additional file 6 of Genomic Architecture of Yield Performance of an Elite Rice Hybrid Revealed by its Derived Recombinant Inbred Line and Their Backcross Hybrid Populations

Fan Zhang (46132)
Conghe Zhang (13894154)
Xiuqin Zhao (142512)
Shuangbing Zhu (11244365)
Kai Chen (129938)
Guixiang Zhou (552998)
Zhichao Wu (410668)
Min Li (12799)
Tianqing Zheng (635384)
Wensheng Wang (142516)
Zhi Yan (317034)
Qinyong Fei (13894157)
Zhikang Li (416310)
Jinjie Chen (5003939)
Jianlong Xu (841260)

October 2022

Additional file 6: Table S3. Summary of 639 main-effect QTL affecting 12 traits identified in the co...

Additional file 5: Figure S5. of Detection of Novel QTLs Regulating Grain Size in Extra-Large Grain Rice (Oryza sativa L.) Lines

Shuhei Segami (3537926)
Tatsuya Yamamoto (586740)
Katsuyuki Oki (2163046)
Tomonori Noda (3537929)
Hiroyuki Kanamori (82111)
Harumi Sasaki (561894)
Satomi Mori (561895)
Motoyuki Ashikari (3465128)
Hidemi Kitano (524317)
Yuichi Katayose (3408902)
Yukimoto Iwasaki (3537920)
Kotaro Miura (3537923)

July 2016

Selection of segregation lines to evaluate the effect of quantitative trait loci (QTLs) detected on ...

Additional file 3: Table S1. of Identification of bakanae disease resistance loci in japonica rice through genome wide association study

Andrea Volante (141325)
Alessandro Tondelli (3167490)
Maria Aragona (4098790)
Maria Valente (4098793)
Chiara Biselli (114669)
Francesca Desiderio (2588137)
Paolo Bagnaresi (84939)
Slavica Matic (4098787)
Maria Gullino (3579608)
Alessandro Infantino (4098784)
Davide Spadaro (1525594)
Giampiero ValĂ¨ (3486386)

June 2017

Genetic diversity (A), Genetic divergence (FST) (B) and marker density (C) estimates computed for th...

Additional file 1: of Genome-Based Identification of Heterotic Patterns in Rice

Ulrike Beukert (4037831)
Zuo Li (4037840)
Guozheng Liu (441515)
Yusheng Zhao (388357)
Nadhigade Ramachandra (4037834)
Vilson Mirdita (4037837)
Fabiano Pita (4037828)
Klaus Pillen (563597)
Jochen Reif (3312300)

May 2017

for Genome-based identification of heterotic. Figure S1. Decay of linkage disequilibrium measured us...

Additional file 8: Table S5. of Discovery and mapping of genomic regions governing economically important traits of Basmati rice

Lakshminarayana Vemireddy (3461612)
Sabahat Noor (3461618)
VV Satyavathi (3461630)
A Srividhya (3461609)
A Kaliappan (3461624)
SRN Parimala (3461639)
Prathibha Bharathi (3461627)
Dondapati Deborah (3461636)
KV Rao (3461621)
N Shobharani (3461633)
EA Siddiq (3461615)
Javaregowda Nagaraju (63235)

August 2015

Quantitative trait loci (QTLs) detected in theÂ RIL population derived from Basmati370/Jaya. (DOC 38...

Additional file 7: Table S4. of Discovery and mapping of genomic regions governing economically important traits of Basmati rice

Lakshminarayana Vemireddy (3461612)
Sabahat Noor (3461618)
VV Satyavathi (3461630)
A Srividhya (3461609)
A Kaliappan (3461624)
SRN Parimala (3461639)
Prathibha Bharathi (3461627)
Dondapati Deborah (3461636)
KV Rao (3461621)
N Shobharani (3461633)
EA Siddiq (3461615)
Javaregowda Nagaraju (63235)

August 2015

Quantitative trait loci (QTLs) detected in F3 population of Basmati370/Jaya. (DOC 35 kb

Additional file 1: of Finding the superior allele of japonica-type for increasing stem lodging resistance in indica rice varieties using chromosome segment substitution lines

Indria Mulsanti (5119031)
Toshio Yamamoto (65296)
Tadamasa Ueda (5119034)
Ahmad Samadi (5119043)
Eri Kamahora (5119028)
Indrastuti Rumanti (5119022)
Vo Thanh (5119025)
Shunsuke Adachi (1351500)
Sakae Suzuki (5119040)
Motoki Kanekatsu (5119037)
Tadashi Hirasawa (4181440)
Taiichiro Ookawa (4181443)

April 2018

Figure S1. Graphical genotypes of the reciprocal CSSLs. (a) 41Â K-CSSLs, (b) 39Â T-CSSLs. Orange reg...