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Additional file 1: Table S1. of Association between polymorphisms of TAS2R16 and susceptibility to colorectal cancer

Jonathan Barontini (4440184)
Marco Antinucci (4440190)
Sergio Tofanelli (811843)
Maurizio Cammalleri (4440181)
Massimo Dal Monte (4249792)
Federica Gemignani (511646)
Pavel Vodicka (180647)
Roberto Marangoni (68288)
Ludmila Vodickova (180609)
Juozas Kupcinskas (515235)
Veronika Vymetalkova (511426)
Asta Forsti (4440187)
Federico Canzian (23588)
Angelika Stein (218752)
Victor Moreno (748751)
Nicola Mastrodonato (174236)
Francesca Tavano (174161)
Anna Panza (174181)
Roberto Barale (123160)
Stefano Landi (511647)
Daniele Campa (102616)

Publication date

September 2017

DOI

10.6084/m9.figshare.c.3881386_d1.v1

Abstract

Description of data stratified analysis frequencies, call rate and Hardy-Weinberg equilibrium values of each polymorphism. (DOCX 19Â kb

Extracted data

Related items

Characteristics of studies on the association between rs10795668 polymorphism and colorectal cancer risk included in the meta-analysis.

Qin Qin (83769)
Li Liu (75607)
Rong Zhong (134329)
Li Zou (134324)
Jieyun Yin (116280)
BeiBei Zhu (5654944)
BeiBei Cao (414495)
Wei Chen (23863)
Jigui Chen (400491)
Xiaorong Li (66719)
Tingting Li (10553)
Xuzai Lu (134340)
Jiao Lou (134334)
Juntao Ke (134348)
Sheng Wei (116298)
Xiaoping Miao (172046)
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<p>Abbreviation: HWE, Hardy-Weinberg equilibrium; MAF, minor allele frequency; CC, case-control stud...

Additional file 1: Table S1. of A novel variant on chromosome 6p21.1 is associated with the risk of developing colorectal cancer: a two-stage case-control study in Han Chinese

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The basic information of the 23 candidate tagSNPs and the results of the association study in discov...

Additional file 1: Table S1. of Colorectal cancer incidence in path_MLH1 carriers subjected to different follow-up protocols: a Prospective Lynch Syndrome Database report

October 2017

Annual incidence rates (AIR) and 95% confidence intervals for colorectal cancer and extra-colonic ca...

Additional file 2: of Differential expression of Cosmc, T-synthase and mucins in Tn-positive colorectal cancers

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Single nucleotide polymorphisms (SNPs) used in the loss of heterozygosity (LOH) analysis. A Table co...

Additional file 1: of Associations of single nucleotide polymorphisms with mucinous colorectal cancer: genome-wide common variant and gene-based rare variant analyses

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Table S1. Top ten most significant common SNPs identified based on the univariable analyses and the ...

Additional file 1: of Association between ATM rs1801516 polymorphism and cancer susceptibility: a meta-analysis involving 12,879 cases and 18,054 controls

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November 2018

Table S1. Matching criteria and genotyping method of the eligible studies included in the meta-analy...

Additional file 1: of A genome-wide association study identifies single nucleotide polymorphisms associated with time-to-metastasis in colorectal cancer

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Additional file 1: Table S1. of Common variants in glucuronidation enzymes and membrane transporters as potential risk factors for colorectal cancer: a case control study

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SNPs studied and their frequencies in our population. This table contains the description and freque...

Additional file 2: Table S2. of In silico pathway analysis and tissue specific cis-eQTL for colorectal cancer GWAS risk variants

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Additional file 2: Table S2. of Correlation between mutations and mRNA expression of APC and MUTYH genes: new insight into hereditary colorectal polyposis predisposition

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October 2015

Mean and median ASE values of cases and controls after combining both MUTYH assays. (DOCX 18 kb

Additional file 1: Table S1: of Molecular and pathological characterization of the EZH2 rs3757441 single nucleotide polymorphism in colorectal cancer

Lorenzo Fornaro (3563837)
Pinuccia Faviana (3563840)
Veronica De Gregorio (3563846)
Caterina Vivaldi (3563852)
Elisa Paolicchi (3563855)
Gianluca Masi (623355)
Fotios Loupakis (430779)
Elisa Sensi (3563843)
Cristiana Lupi (3563834)
Gabriella Fontanini (3563849)
Yuzhuo Wang (79735)
Romano Danesi (1871413)
Alfredo Falcone (121178)
Francesco Crea (1887346)

November 2015

Correlation of EZH2 rs3757441 variants with clinical and molecular characteristics. Abbreviations: %...

Additional file 1: Table S1. of The RS4939827 polymorphism in the SMAD7 GENE and its association with Mediterranean diet in colorectal carcinogenesis

Jéssica Alonso-Molero (4544575)
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Marina Pollán (69980)
Nuria Aragonés (2936340)
Javier Llorca (118686)
M. Henar Alonso (2936316)
Adonina Tardón (135759)
Pilar Amiano (23583)
José Moleon (4544569)
Rosana Pérez (4544578)
Rocío Capelo (4544563)
Antonio Molina (537591)
Inés Acebo (4544572)
Marcela Guevara (397281)
Beatriz Perez-Gomez (4217107)
Virginia Lope (740122)
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Additional file 1: of IL1A polymorphisms is a risk factor for colorectal cancer in Chinese Han population: a case control study

Hong Ji (293468)
Le Lu (5228393)
Jingjing Huang (170112)
Yang Liu (4829)
Binchao Zhang (6413042)
Hui Tang (226667)
Dangze Sun (6413045)
Yafei Zhang (556708)
Hao Shang (1774867)
Yiming Li (40290)
Hongwei Lu (581230)

March 2019

Table S1. Primers used for identification of the IL1A polymorphisms. Table S2. Distributions of age ...

Additional file 4: Figure S2. of In silico pathway analysis and tissue specific cis-eQTL for colorectal cancer GWAS risk variants

Lenora Loo (4028117)
Mathieu Lemire (69574)
LoĂŻc Le Marchand (3578321)

May 2017

Cis-eQTL in colorectal tumor tissue and colorectal tumor versus normal tissue gene expression profil...

Additional file 1: of Upregulation of SLC2A3 gene and prognosis in colorectal carcinoma: analysis of TCGA data

Eunyoung Kim (2722537)
Sohee Jung (6553586)
Won Park (3487628)
Joon-Hyop Lee (6553589)
Rumi Shin (6553592)
Seung Heo (6553595)
Eun Choe (4411225)
Jae Lee (2975361)
Kwangsoo Kim (395907)
Young Chai (3455840)

April 2019

Table S1. Univariate cox regression analysis of glycolysis related genes for OS and DFS Table S2. Un...

Characteristics of studies on the association between rs10795668 polymorphism and colorectal cancer risk included in the meta-analysis.

Qin Qin (83769)
Li Liu (75607)
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Li Zou (134324)
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BeiBei Zhu (5654944)
BeiBei Cao (414495)
Wei Chen (23863)
Jigui Chen (400491)
Xiaorong Li (66719)
Tingting Li (10553)
Xuzai Lu (134340)
Jiao Lou (134334)
Juntao Ke (134348)
Sheng Wei (116298)
Xiaoping Miao (172046)
Shaofa Nie (116294)

May 2013

<p>Abbreviation: HWE, Hardy-Weinberg equilibrium; MAF, minor allele frequency; CC, case-control stud...

Additional file 1: Table S1. of A novel variant on chromosome 6p21.1 is associated with the risk of developing colorectal cancer: a two-stage case-control study in Han Chinese

Chunxiao Xu (311834)
Dan Zhou (29408)
Feixia Pan (3504347)
Yi Liu (36759)
Dandan zhang (3504344)
Aifen Lin (3504350)
Xiaoping Miao (172046)
Yaqin Ni (3504353)
Duo Lv (3504341)
Shuai Zhang (115662)
Xiaobo Li (118828)
Yimin Zhu (101874)
Maode Lai (15338)

October 2016

The basic information of the 23 candidate tagSNPs and the results of the association study in discov...

Additional file 1: Table S1. of Colorectal cancer incidence in path_MLH1 carriers subjected to different follow-up protocols: a Prospective Lynch Syndrome Database report

October 2017

Annual incidence rates (AIR) and 95% confidence intervals for colorectal cancer and extra-colonic ca...

Additional file 2: of Differential expression of Cosmc, T-synthase and mucins in Tn-positive colorectal cancers

Xiaodong Sun (166163)
Tongzhong Ju (52651)
Richard Cummings (1822642)

August 2018

Single nucleotide polymorphisms (SNPs) used in the loss of heterozygosity (LOH) analysis. A Table co...

Additional file 1: of Associations of single nucleotide polymorphisms with mucinous colorectal cancer: genome-wide common variant and gene-based rare variant analyses

Michelle Penney (5384228)
Patrick Parfrey (148810)
Sevtap Savas (148793)
Yildiz Yilmaz (5384225)

June 2018

Table S1. Top ten most significant common SNPs identified based on the univariable analyses and the ...

Additional file 1: of Association between ATM rs1801516 polymorphism and cancer susceptibility: a meta-analysis involving 12,879 cases and 18,054 controls

Yulu Gu (5305244)
Jikang Shi (5305247)
Shuang Qiu (233305)
Yichun Qiao (5922728)
Xin Zhang (35492)
Yi Cheng (317041)
Yawen Liu (469311)

November 2018

Table S1. Matching criteria and genotyping method of the eligible studies included in the meta-analy...

Additional file 1: of A genome-wide association study identifies single nucleotide polymorphisms associated with time-to-metastasis in colorectal cancer

Michelle Penney (5384228)
Patrick Parfrey (148810)
Sevtap Savas (148793)
Yildiz Yilmaz (5384225)

February 2019

Table S1. Results from the stepwise variable selection method using multivariable mixture cure model...

Additional file 1: Table S1. of Common variants in glucuronidation enzymes and membrane transporters as potential risk factors for colorectal cancer: a case control study

Sabrina Falkowski (4721922)
Jean-Baptiste Woillard (4721913)
Deborah Postil (4721928)
Nicole Tubiana-Mathieu (3536990)
Eric Terrebonne (635977)
Antoine Pariente (4721916)
Denis Smith (4721919)
Rosine Guimbaud (607282)
Claire Thalamas (334639)
Koukeb Rouguieg-Malki (4721925)
Pierre Marquet (114118)
Nicolas Picard (259979)

December 2017

SNPs studied and their frequencies in our population. This table contains the description and freque...

Additional file 2: Table S2. of In silico pathway analysis and tissue specific cis-eQTL for colorectal cancer GWAS risk variants

Lenora Loo (4028117)
Mathieu Lemire (69574)
LoĂŻc Le Marchand (3578321)

May 2017

Transcription regulatory features of intronic colorectal cancer risk alleles and linked variants wit...

Additional file 2: Table S2. of Correlation between mutations and mRNA expression of APC and MUTYH genes: new insight into hereditary colorectal polyposis predisposition

Gitana Aceto (3399533)
Fabiana Fantini (487925)
Sabrina De Iure (3399542)
Marta Di Nicola (325339)
Giandomenico Palka (3399539)
Rosa Valanzano (168013)
Patrizia Di Gregorio (355337)
Vittoria Stigliano (487927)
Maurizio Genuardi (395414)
Pasquale Battista (487926)
Alessandro Cama (260252)
Maria Curia (3399536)

October 2015

Mean and median ASE values of cases and controls after combining both MUTYH assays. (DOCX 18 kb

Additional file 1: Table S1: of Molecular and pathological characterization of the EZH2 rs3757441 single nucleotide polymorphism in colorectal cancer

Lorenzo Fornaro (3563837)
Pinuccia Faviana (3563840)
Veronica De Gregorio (3563846)
Caterina Vivaldi (3563852)
Elisa Paolicchi (3563855)
Gianluca Masi (623355)
Fotios Loupakis (430779)
Elisa Sensi (3563843)
Cristiana Lupi (3563834)
Gabriella Fontanini (3563849)
Yuzhuo Wang (79735)
Romano Danesi (1871413)
Alfredo Falcone (121178)
Francesco Crea (1887346)

November 2015

Correlation of EZH2 rs3757441 variants with clinical and molecular characteristics. Abbreviations: %...

Additional file 1: Table S1. of The RS4939827 polymorphism in the SMAD7 GENE and its association with Mediterranean diet in colorectal carcinogenesis

Jéssica Alonso-Molero (4544575)
Carmen González-Donquiles (4544566)
Camilo Palazuelos (2936343)
Tania Fernández-Villa (3467051)
Elena Ramos (3004104)
Marina Pollán (69980)
Nuria Aragonés (2936340)
Javier Llorca (118686)
M. Henar Alonso (2936316)
Adonina Tardón (135759)
Pilar Amiano (23583)
José Moleon (4544569)
Rosana Pérez (4544578)
Rocío Capelo (4544563)
Antonio Molina (537591)
Inés Acebo (4544572)
Marcela Guevara (397281)
Beatriz Perez-Gomez (4217107)
Virginia Lope (740122)
José Huerta (3499376)
Gemma Castaño-Vinyals (489695)
Manolis Kogevinas (135763)
Victor Moreno (748751)
Vicente Martín (178987)

October 2017

Analysis of SNPs related to CRC. The minimally adjusted odds ratio (OR) was computed adjusting by se...

Additional file 1: of IL1A polymorphisms is a risk factor for colorectal cancer in Chinese Han population: a case control study

Hong Ji (293468)
Le Lu (5228393)
Jingjing Huang (170112)
Yang Liu (4829)
Binchao Zhang (6413042)
Hui Tang (226667)
Dangze Sun (6413045)
Yafei Zhang (556708)
Hao Shang (1774867)
Yiming Li (40290)
Hongwei Lu (581230)

March 2019

Table S1. Primers used for identification of the IL1A polymorphisms. Table S2. Distributions of age ...

Additional file 4: Figure S2. of In silico pathway analysis and tissue specific cis-eQTL for colorectal cancer GWAS risk variants

Lenora Loo (4028117)
Mathieu Lemire (69574)
LoĂŻc Le Marchand (3578321)

May 2017

Cis-eQTL in colorectal tumor tissue and colorectal tumor versus normal tissue gene expression profil...

Additional file 1: of Upregulation of SLC2A3 gene and prognosis in colorectal carcinoma: analysis of TCGA data

Eunyoung Kim (2722537)
Sohee Jung (6553586)
Won Park (3487628)
Joon-Hyop Lee (6553589)
Rumi Shin (6553592)
Seung Heo (6553595)
Eun Choe (4411225)
Jae Lee (2975361)
Kwangsoo Kim (395907)
Young Chai (3455840)

April 2019

Table S1. Univariate cox regression analysis of glycolysis related genes for OS and DFS Table S2. Un...

Characteristics of studies on the association between rs10795668 polymorphism and colorectal cancer risk included in the meta-analysis.

Qin Qin (83769)
Li Liu (75607)
Rong Zhong (134329)
Li Zou (134324)
Jieyun Yin (116280)
BeiBei Zhu (5654944)
BeiBei Cao (414495)
Wei Chen (23863)
Jigui Chen (400491)
Xiaorong Li (66719)
Tingting Li (10553)
Xuzai Lu (134340)
Jiao Lou (134334)
Juntao Ke (134348)
Sheng Wei (116298)
Xiaoping Miao (172046)
Shaofa Nie (116294)

May 2013

<p>Abbreviation: HWE, Hardy-Weinberg equilibrium; MAF, minor allele frequency; CC, case-control stud...

Additional file 1: Table S1. of A novel variant on chromosome 6p21.1 is associated with the risk of developing colorectal cancer: a two-stage case-control study in Han Chinese

Chunxiao Xu (311834)
Dan Zhou (29408)
Feixia Pan (3504347)
Yi Liu (36759)
Dandan zhang (3504344)
Aifen Lin (3504350)
Xiaoping Miao (172046)
Yaqin Ni (3504353)
Duo Lv (3504341)
Shuai Zhang (115662)
Xiaobo Li (118828)
Yimin Zhu (101874)
Maode Lai (15338)

October 2016

The basic information of the 23 candidate tagSNPs and the results of the association study in discov...

Additional file 1: Table S1. of Colorectal cancer incidence in path_MLH1 carriers subjected to different follow-up protocols: a Prospective Lynch Syndrome Database report

October 2017

Annual incidence rates (AIR) and 95% confidence intervals for colorectal cancer and extra-colonic ca...